RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 TMEM163Q8TC26 289 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 KIF25Q9UIL4 384 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 GPR160Q9UJ42 338 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 RGPD1P0DJD0 1748 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 PHIPQ8WWQ0 1821 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 OR6C68A6NDL8 312 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 F6UZH7 168 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 EIF3FO00303 357 aaPredicted RBP8.57□□□□□ -1.04
ATL3-201ENST00000398868 CHEK1O14757 476 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 USF1P22415 310 aaPredicted RBP8.57□□□□□ -1.04
ATL3-201ENST00000398868 MLLT11Q13015 90 aaPredicted RBP8.57□□□□□ -1.04
ATL3-201ENST00000398868 COTL1Q14019 142 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 HLA-BQ31612 363 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 GDPD3Q7L5L3 318 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 RELL1Q8IUW5 271 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 LRRC56Q8IYG6 542 aaPredicted RBP8.57□□□□□ -1.04
ATL3-201ENST00000398868 MYEOVQ96EZ4 313 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 ZFP57Q9NU63 452 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 SAGE1Q9NXZ1 904 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 TRIP12Q14669 1992 aaPredicted RBP8.57□□□□□ -1.04
ATL3-201ENST00000398868 NID2Q14112 1375 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 ASXL3Q9C0F0 2248 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 FABP4P15090 132 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 MPGP29372 298 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 GPLD1P80108 840 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 OR8G1Q15617 311 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 GUSBP11Q6P575 273 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 TMEM207Q6UWW9 146 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 C15orf39Q6ZRI6 1047 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 RDH10Q8IZV5 341 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 SLC41A2Q96JW4 573 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 PARD6AQ9NPB6 346 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 SLC35D1Q9NTN3 355 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 RYDENQ9NUL5 291 aaKnown RBP8.57□□□□□ -1.04
ATL3-201ENST00000398868 A6NIZ1 184 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 CD27P26842 260 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 RAP1BP61224 184 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 ARL16Q0P5N6 197 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 TBC1D28Q2M2D7 210 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 Q6ZNX1 250 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 C16orf47Q6ZP98 133 aaPredicted RBP8.57□□□□□ -1.04
ATL3-201ENST00000398868 OR51A4Q8NGJ6 313 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 OR51A2Q8NGJ7 313 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 L3HYPDHQ96EM0 354 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 SORCS2Q96PQ0 1159 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 TOPAZ1Q8N9V7 1692 aa8.57□□□□□ -1.04
ATL3-201ENST00000398868 CDHR4A6H8M9 788 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 DRGXA6NNA5 263 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 E7ESA3 106 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 AK1P00568 194 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 SRP14P37108 136 aaKnown RBP8.56□□□□□ -1.04
ATL3-201ENST00000398868 PIGAP37287 484 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 ACSM1Q08AH1 577 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 HMGN3Q15651 99 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 NKAIN1Q4KMZ8 207 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 C19orf48Q6RUI8 117 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 RBM45Q8IUH3 476 aaKnown RBP8.56□□□□□ -1.04
ATL3-201ENST00000398868 MFSD9Q8NBP5 474 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 OR4A16Q8NH70 328 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 ZFAND1Q8TCF1 268 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 RSRP1Q9BUV0 290 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 LIN7BQ9HAP6 207 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 NOX4Q9NPH5 578 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 KCNK5O95279 499 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 ALDOCP09972 364 aaKnown RBP8.56□□□□□ -1.04
ATL3-201ENST00000398868 HNRNPA3P51991 378 aaKnown RBP8.56□□□□□ -1.04
ATL3-201ENST00000398868 SFXN4Q6P4A7 337 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 FAM71CQ8NEG0 241 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 SLC24A4Q8NFF2 622 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 SCARB1Q8WTV0 552 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 CGGBP1Q9UFW8 167 aaPredicted RBP8.56□□□□□ -1.04
ATL3-201ENST00000398868 TCRBV3S1A0A5B6 114 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 TMX2-CTNND1H3BSU7 103 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 HCRTR1O43613 425 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 ALPLP05186 524 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 RAB38P57729 211 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 MFGE8Q08431 387 aaPredicted RBP8.56□□□□□ -1.04
ATL3-201ENST00000398868 C3AR1Q16581 482 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 RBMS3Q6XE24 437 aaKnown RBP8.56□□□□□ -1.04
ATL3-201ENST00000398868 DCXRQ7Z4W1 244 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 OR51S1Q8NGJ8 323 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 ANKRD9Q96BM1 317 aaPredicted RBP8.56□□□□□ -1.04
ATL3-201ENST00000398868 MSL2Q9HCI7 577 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 BTNL2Q9UIR0 455 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 RNF150Q9ULK6 438 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 COA3Q9Y2R0 106 aaPredicted RBP8.56□□□□□ -1.04
ATL3-201ENST00000398868 D6RAR5 112 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 CRYBA1P05813 215 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 SBK2P0C263 348 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 ACP2P11117 423 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 PSMB1P20618 241 aaKnown RBP8.56□□□□□ -1.04
ATL3-201ENST00000398868 AADACP22760 399 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 PSMB3P49720 205 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 PMPCAQ10713 525 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 SIX1Q15475 284 aaPredicted RBP8.56□□□□□ -1.04
ATL3-201ENST00000398868 OR52I1Q8NGK6 324 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 ASB11Q8WXH4 323 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 YBX2Q9Y2T7 364 aaKnown RBP8.56□□□□□ -1.04
ATL3-201ENST00000398868 IGKV3-7A0A075B6H7 116 aa8.56□□□□□ -1.04
ATL3-201ENST00000398868 PPP5D1E7EU14 171 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms