RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 FAM86B1Q8N7N1 296 aa11.47□□□□□ -0.57
VCX3A-202ENST00000398729 C7orf34Q96L11 122 aa11.47□□□□□ -0.57
VCX3A-202ENST00000398729 Q96M85 177 aa11.47□□□□□ -0.57
VCX3A-202ENST00000398729 LRRC37BQ96QE4 947 aa11.47□□□□□ -0.57
VCX3A-202ENST00000398729 POLE4Q9NR33 117 aa11.47□□□□□ -0.57
VCX3A-202ENST00000398729 AURKCQ9UQB9 309 aa11.47□□□□□ -0.57
VCX3A-202ENST00000398729 SIGLEC7Q9Y286 467 aa11.47□□□□□ -0.57
VCX3A-202ENST00000398729 V9GYQ6 96 aa11.47□□□□□ -0.57
VCX3A-202ENST00000398729 MEGF8Q7Z7M0 2845 aa11.47□□□□□ -0.57
VCX3A-202ENST00000398729 LOC100509620A0A075B734 347 aa11.46□□□□□ -0.57
VCX3A-202ENST00000398729 TRBV4-1A0A0J9YWV2 114 aa11.46□□□□□ -0.57
VCX3A-202ENST00000398729 PRSS37A4D1T9 235 aa11.46□□□□□ -0.57
VCX3A-202ENST00000398729 NCR1O76036 304 aa11.46□□□□□ -0.57
VCX3A-202ENST00000398729 DIRAS1O95057 198 aa11.46□□□□□ -0.57
VCX3A-202ENST00000398729 IGHV3-13P01766 116 aa11.46□□□□□ -0.57
VCX3A-202ENST00000398729 HSD17B1P14061 328 aa11.46□□□□□ -0.57
VCX3A-202ENST00000398729 ZNF26P17031 533 aaPredicted RBP11.46□□□□□ -0.57
VCX3A-202ENST00000398729 HNF1AP20823 631 aa11.46□□□□□ -0.57
VCX3A-202ENST00000398729 COL8A2P25067 703 aa11.46□□□□□ -0.57
VCX3A-202ENST00000398729 GCH1P30793 250 aa11.46□□□□□ -0.57
VCX3A-202ENST00000398729 SDHAP31040 664 aa11.46□□□□□ -0.57
VCX3A-202ENST00000398729 MAGEB1P43366 347 aa11.46□□□□□ -0.57
VCX3A-202ENST00000398729 GPR6P46095 362 aaPredicted RBP11.46□□□□□ -0.57
VCX3A-202ENST00000398729 OMPP47874 163 aa11.46□□□□□ -0.57
VCX3A-202ENST00000398729 LIMS1P48059 325 aa11.46□□□□□ -0.57
VCX3A-202ENST00000398729 TMEM33P57088 247 aa11.46□□□□□ -0.57
VCX3A-202ENST00000398729 SMIM11AP58511 58 aa11.46□□□□□ -0.57
VCX3A-202ENST00000398729 KRR1Q13601 381 aaKnown RBP11.46□□□□□ -0.57
VCX3A-202ENST00000398729 ENDOGQ14249 297 aaKnown RBP11.46□□□□□ -0.57
VCX3A-202ENST00000398729 TRIP10Q15642 601 aa11.46□□□□□ -0.57
VCX3A-202ENST00000398729 ZNF718Q3SXZ3 478 aa11.46□□□□□ -0.57
VCX3A-202ENST00000398729 MESTQ5EB52 335 aa11.46□□□□□ -0.57
VCX3A-202ENST00000398729 GPR139Q6DWJ6 353 aa11.46□□□□□ -0.57
VCX3A-202ENST00000398729 LINC01356Q8N9X3 169 aa11.46□□□□□ -0.57
VCX3A-202ENST00000398729 MCUR1Q96AQ8 359 aa11.46□□□□□ -0.57
VCX3A-202ENST00000398729 PYURFQ96I23 114 aa11.46□□□□□ -0.57
VCX3A-202ENST00000398729 RSRC1Q96IZ7 334 aaKnown RBP11.46□□□□□ -0.57
VCX3A-202ENST00000398729 GPX7Q96SL4 187 aaPredicted RBP11.46□□□□□ -0.57
VCX3A-202ENST00000398729 SOX7Q9BT81 388 aa11.46□□□□□ -0.57
VCX3A-202ENST00000398729 WACQ9BTA9 647 aa11.46□□□□□ -0.57
VCX3A-202ENST00000398729 ZNF416Q9BWM5 594 aa11.46□□□□□ -0.57
VCX3A-202ENST00000398729 WNT5BQ9H1J7 359 aa11.46□□□□□ -0.57
VCX3A-202ENST00000398729 NKIRAS2Q9NYR9 191 aa11.46□□□□□ -0.57
VCX3A-202ENST00000398729 TAGLN3Q9UI15 199 aa11.46□□□□□ -0.57
VCX3A-202ENST00000398729 NDRG4Q9ULP0 352 aaKnown RBP11.46□□□□□ -0.57
VCX3A-202ENST00000398729 ARL2BPQ9Y2Y0 163 aa11.46□□□□□ -0.57
VCX3A-202ENST00000398729 TEX13CA0A0J9YWL9 993 aa11.45□□□□□ -0.58
VCX3A-202ENST00000398729 PTP4A3O75365 173 aa11.45□□□□□ -0.58
VCX3A-202ENST00000398729 DCTN3O75935 186 aa11.45□□□□□ -0.58
VCX3A-202ENST00000398729 SRD5A1P18405 259 aa11.45□□□□□ -0.58
VCX3A-202ENST00000398729 IL2RGP31785 369 aa11.45□□□□□ -0.58
VCX3A-202ENST00000398729 WNT5AP41221 380 aa11.45□□□□□ -0.58
VCX3A-202ENST00000398729 GYS2P54840 703 aa11.45□□□□□ -0.58
VCX3A-202ENST00000398729 CCL8P80075 99 aa11.45□□□□□ -0.58
VCX3A-202ENST00000398729 TEKQ02763 1124 aa11.45□□□□□ -0.58
VCX3A-202ENST00000398729 GLO1Q04760 184 aa11.45□□□□□ -0.58
VCX3A-202ENST00000398729 SCRN3Q0VDG4 424 aa11.45□□□□□ -0.58
VCX3A-202ENST00000398729 CCNIQ14094 377 aa11.45□□□□□ -0.58
VCX3A-202ENST00000398729 FAM120AOSQ5T036 256 aa11.45□□□□□ -0.58
VCX3A-202ENST00000398729 SPATA46Q5T0L3 261 aa11.45□□□□□ -0.58
VCX3A-202ENST00000398729 ZNF774Q6NX45 483 aa11.45□□□□□ -0.58
VCX3A-202ENST00000398729 ARL9Q6T311 187 aa11.45□□□□□ -0.58
VCX3A-202ENST00000398729 ZNF101Q8IZC7 436 aa11.45□□□□□ -0.58
VCX3A-202ENST00000398729 OR52J3Q8NH60 311 aa11.45□□□□□ -0.58
VCX3A-202ENST00000398729 ABHD4Q8TB40 342 aa11.45□□□□□ -0.58
VCX3A-202ENST00000398729 YIPF5Q969M3 257 aa11.45□□□□□ -0.58
VCX3A-202ENST00000398729 RASD2Q96D21 266 aa11.45□□□□□ -0.58
VCX3A-202ENST00000398729 MARS2Q96GW9 593 aaKnown RBP11.45□□□□□ -0.58
VCX3A-202ENST00000398729 DHRS1Q96LJ7 313 aa11.45□□□□□ -0.58
VCX3A-202ENST00000398729 NSMCE2Q96MF7 247 aa11.45□□□□□ -0.58
VCX3A-202ENST00000398729 CDRT15Q96T59 188 aa11.45□□□□□ -0.58
VCX3A-202ENST00000398729 ELOVL3Q9HB03 270 aa11.45□□□□□ -0.58
VCX3A-202ENST00000398729 EMC7Q9NPA0 242 aa11.45□□□□□ -0.58
VCX3A-202ENST00000398729 NRIP3Q9NQ35 241 aa11.45□□□□□ -0.58
VCX3A-202ENST00000398729 ZNF275Q9NSD4 429 aaPredicted RBP11.45□□□□□ -0.58
VCX3A-202ENST00000398729 NDE1Q9NXR1 346 aa11.45□□□□□ -0.58
VCX3A-202ENST00000398729 PLSCR5A0PG75 271 aa11.44□□□□□ -0.58
VCX3A-202ENST00000398729 UNC119BA6NIH7 251 aa11.44□□□□□ -0.58
VCX3A-202ENST00000398729 H3BSA7 217 aa11.44□□□□□ -0.58
VCX3A-202ENST00000398729 TPD52L2O43399 206 aaKnown RBP11.44□□□□□ -0.58
VCX3A-202ENST00000398729 PPIHO43447 177 aaKnown RBP11.44□□□□□ -0.58
VCX3A-202ENST00000398729 ICMTO60725 284 aa11.44□□□□□ -0.58
VCX3A-202ENST00000398729 KHDRBS3O75525 346 aaKnown RBP11.44□□□□□ -0.58
VCX3A-202ENST00000398729 GADD45GO95257 159 aa11.44□□□□□ -0.58
VCX3A-202ENST00000398729 COX5BP10606 129 aa11.44□□□□□ -0.58
VCX3A-202ENST00000398729 CTLA4P16410 223 aa11.44□□□□□ -0.58
VCX3A-202ENST00000398729 MSX2P35548 267 aaPredicted RBP11.44□□□□□ -0.58
VCX3A-202ENST00000398729 RPS6KA3P51812 740 aa11.44□□□□□ -0.58
VCX3A-202ENST00000398729 ARHGDIAP52565 204 aa11.44□□□□□ -0.58
VCX3A-202ENST00000398729 CDH15P55291 814 aa11.44□□□□□ -0.58
VCX3A-202ENST00000398729 PPP1CBP62140 327 aa11.44□□□□□ -0.58
VCX3A-202ENST00000398729 MXRA7P84157 204 aa11.44□□□□□ -0.58
VCX3A-202ENST00000398729 SPIBQ01892 262 aa11.44□□□□□ -0.58
VCX3A-202ENST00000398729 SEC23BQ15437 767 aa11.44□□□□□ -0.58
VCX3A-202ENST00000398729 MBNL2Q5VZF2 373 aaKnown RBP11.44□□□□□ -0.58
VCX3A-202ENST00000398729 C16orf89Q6UX73 402 aa11.44□□□□□ -0.58
VCX3A-202ENST00000398729 THSD4Q6ZMP0 1018 aa11.44□□□□□ -0.58
VCX3A-202ENST00000398729 DPY19L2P2Q6ZN68 376 aa11.44□□□□□ -0.58
VCX3A-202ENST00000398729 IL17RELQ6ZVW7 336 aa11.44□□□□□ -0.58
VCX3A-202ENST00000398729 PIGWQ7Z7B1 504 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms