RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 CCR6P51684 374 aa10.53□□□□□ -0.72
PCDHGA8-201ENST00000398604 RIPPLY1Q0D2K3 151 aa10.53□□□□□ -0.72
PCDHGA8-201ENST00000398604 ALKAL2Q6UX46 152 aa10.53□□□□□ -0.72
PCDHGA8-201ENST00000398604 HMGCLL1Q8TB92 370 aa10.53□□□□□ -0.72
PCDHGA8-201ENST00000398604 OR51E1Q8TCB6 317 aa10.53□□□□□ -0.72
PCDHGA8-201ENST00000398604 GIMAP1Q8WWP7 306 aa10.53□□□□□ -0.72
PCDHGA8-201ENST00000398604 TRIB1Q96RU8 372 aa10.53□□□□□ -0.72
PCDHGA8-201ENST00000398604 MED18Q9BUE0 208 aa10.53□□□□□ -0.72
PCDHGA8-201ENST00000398604 RANGRFQ9HD47 186 aaPredicted RBP10.53□□□□□ -0.72
PCDHGA8-201ENST00000398604 EXO1Q9UQ84 846 aaKnown RBP10.53□□□□□ -0.72
PCDHGA8-201ENST00000398604 C4orf47A7E2U8 309 aa10.52□□□□□ -0.72
PCDHGA8-201ENST00000398604 GLCEO94923 617 aa10.52□□□□□ -0.72
PCDHGA8-201ENST00000398604 PMP2P02689 132 aa10.52□□□□□ -0.72
PCDHGA8-201ENST00000398604 CCR5P51681 352 aa10.52□□□□□ -0.72
PCDHGA8-201ENST00000398604 PPIAP62937 165 aaKnown RBP10.52□□□□□ -0.72
PCDHGA8-201ENST00000398604 CLINT1Q14677 625 aa10.52□□□□□ -0.72
PCDHGA8-201ENST00000398604 OR5M9Q8NGP3 310 aa10.52□□□□□ -0.72
PCDHGA8-201ENST00000398604 LRRC61Q9BV99 259 aa10.52□□□□□ -0.72
PCDHGA8-201ENST00000398604 SLC22A11Q9NSA0 550 aa10.52□□□□□ -0.72
PCDHGA8-201ENST00000398604 STEAP1Q9UHE8 339 aa10.52□□□□□ -0.72
PCDHGA8-201ENST00000398604 FBXO7Q9Y3I1 522 aa10.52□□□□□ -0.72
PCDHGA8-201ENST00000398604 ASB4Q9Y574 426 aa10.52□□□□□ -0.72
PCDHGA8-201ENST00000398604 MED13LQ71F56 2210 aa10.52□□□□□ -0.72
PCDHGA8-201ENST00000398604 A0A1W2PPC1 479 aa10.52□□□□□ -0.73
PCDHGA8-201ENST00000398604 EIF4E2O60573 245 aaKnown RBP10.52□□□□□ -0.73
PCDHGA8-201ENST00000398604 SIX6O95475 246 aa10.52□□□□□ -0.73
PCDHGA8-201ENST00000398604 CPT2P23786 658 aa10.52□□□□□ -0.73
PCDHGA8-201ENST00000398604 CLDN15P56746 228 aa10.52□□□□□ -0.73
PCDHGA8-201ENST00000398604 ISL1P61371 349 aa10.52□□□□□ -0.73
PCDHGA8-201ENST00000398604 ACSM1Q08AH1 577 aa10.52□□□□□ -0.73
PCDHGA8-201ENST00000398604 CST9LP1Q5W188 147 aa10.52□□□□□ -0.73
PCDHGA8-201ENST00000398604 TMEM215Q68D42 235 aa10.52□□□□□ -0.73
PCDHGA8-201ENST00000398604 GUSBP11Q6P575 273 aa10.52□□□□□ -0.73
PCDHGA8-201ENST00000398604 TMEM71Q6P5X7 295 aa10.52□□□□□ -0.73
PCDHGA8-201ENST00000398604 CA13Q8N1Q1 262 aa10.52□□□□□ -0.73
PCDHGA8-201ENST00000398604 SLC22A24Q8N4F4 322 aa10.52□□□□□ -0.73
PCDHGA8-201ENST00000398604 C11orf40Q8WZ69 217 aa10.52□□□□□ -0.73
PCDHGA8-201ENST00000398604 ROBO4Q8WZ75 1007 aa10.52□□□□□ -0.73
PCDHGA8-201ENST00000398604 C3orf49Q96BT1 292 aa10.52□□□□□ -0.73
PCDHGA8-201ENST00000398604 TCRBV5S2A0A599 114 aa10.52□□□□□ -0.73
PCDHGA8-201ENST00000398604 KITLGP21583 273 aa10.52□□□□□ -0.73
PCDHGA8-201ENST00000398604 RPL18Q07020 188 aaKnown RBP10.52□□□□□ -0.73
PCDHGA8-201ENST00000398604 KCNJ8Q15842 424 aa10.52□□□□□ -0.73
PCDHGA8-201ENST00000398604 ZNF454Q8N9F8 522 aa10.52□□□□□ -0.73
PCDHGA8-201ENST00000398604 ANKRD53Q8N9V6 530 aa10.52□□□□□ -0.73
PCDHGA8-201ENST00000398604 ZFAND1Q8TCF1 268 aa10.52□□□□□ -0.73
PCDHGA8-201ENST00000398604 RAB39BQ96DA2 213 aa10.52□□□□□ -0.73
PCDHGA8-201ENST00000398604 STACQ99469 402 aa10.52□□□□□ -0.73
PCDHGA8-201ENST00000398604 NRTNQ99748 197 aa10.52□□□□□ -0.73
PCDHGA8-201ENST00000398604 NMNAT2Q9BZQ4 307 aa10.52□□□□□ -0.73
PCDHGA8-201ENST00000398604 DIMT1Q9UNQ2 313 aaKnown RBP10.52□□□□□ -0.73
PCDHGA8-201ENST00000398604 A0A0B4J2A0 478 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 CLDN1O95832 211 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 OPRM1P35372 400 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 GPR176Q14439 515 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 KHDC1LQ5JSQ8 128 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 SLC22A25Q6T423 547 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 TMEM92Q6UXU6 159 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 HPSE2Q8WWQ2 592 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 RPS10P5Q9NQ39 176 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 SHPKQ9UHJ6 478 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 COPS3Q9UNS2 423 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 PIGBOS1A0A0B4J2F0 54 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 SLC16A6O15403 523 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 TSPAN12O95859 305 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 SCG5P05408 212 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 SRMP19623 302 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 RPS19P39019 145 aaKnown RBP10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 MRPS34P82930 218 aaKnown RBP10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 TEKQ02763 1124 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 KDM4DQ6B0I6 523 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 PRSS41Q7RTY9 318 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 COMMD7Q86VX2 200 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 UBALD2Q8IYN6 164 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 HSD17B11Q8NBQ5 300 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 OR1J2Q8NGS2 313 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 ARL11Q969Q4 196 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 SLC38A1Q9H2H9 487 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 PLCXD1Q9NUJ7 323 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 HIF1ANQ9NWT6 349 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 MYOTQ9UBF9 498 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 SLC22A13Q9Y226 551 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 PRELID1Q9Y255 219 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 TMEM221A6NGB7 291 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 D6RAR5 112 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 MKRN2OSH3BPM6 223 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 PRAF2O60831 178 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 JUNBP17275 347 aaPredicted RBP10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 TBXA2RP21731 343 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 USP51Q70EK9 711 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 OR13C5Q8NGS8 318 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 SLC25A43Q8WUT9 341 aaPredicted RBP10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 ALKBH3Q96Q83 286 aaPredicted RBP10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 KCNE3Q9Y6H6 103 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 PHF1O43189 567 aaPredicted RBP10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 LPLP06858 475 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 IL9P15248 144 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 ETV1P50549 477 aa10.51□□□□□ -0.73
PCDHGA8-201ENST00000398604 MSMO1Q15800 293 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms