RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 FOXRED2Q8IWF2 684 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 GABRG1Q8N1C3 465 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 HSD17B8Q92506 261 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 TCTN2Q96GX1 697 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 PGLYRP3Q96LB9 341 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 MOGAT1Q96PD6 335 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 RBP7Q96R05 134 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 ANAPC13Q9BS18 74 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 LRRC61Q9BV99 259 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 JAM3Q9BX67 310 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 METTL7AQ9H8H3 244 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 EVA1AQ9H8M9 152 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 PARPBPQ9NWS1 579 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 PPP4R1LQ9P1A2 415 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 IFITM5A6NNB3 132 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 ACOT7O00154 380 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 PHYHO14832 338 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 CD3EP07766 207 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 CD14P08571 375 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 CASRP41180 1078 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 NANOS3P60323 173 aaKnown RBP4.47□□□□□ -1.69
SMAD4-202ENST00000398417 RAB2AP61019 212 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 VWA2Q5GFL6 755 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 CREB3L2Q70SY1 520 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 OR11H4Q8NGC9 324 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 TMEM106AQ96A25 262 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 TMEM41AQ96HV5 264 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 SLC6A7Q99884 636 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 C1orf43Q9BWL3 253 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 ZMAT3Q9HA38 289 aaKnown RBP4.47□□□□□ -1.69
SMAD4-202ENST00000398417 SDHAF3Q9NRP4 125 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 CA10Q9NS85 328 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 CD3DP04234 171 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 VAMP1P23763 118 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 DPP4P27487 766 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 KIR3DL2P43630 455 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 POU3F4P49335 361 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 KLF9Q13886 244 aaPredicted RBP4.47□□□□□ -1.69
SMAD4-202ENST00000398417 CEBPEQ15744 281 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 WDR38Q5JTN6 314 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 NKAPLQ5M9Q1 402 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 LAMTOR1Q6IAA8 161 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 TRILQ7L0X0 811 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 BPIFB2Q8N4F0 458 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 STXBP6Q8NFX7 210 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 FLVCR1-AS1Q8TAF5 88 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 TAAR8Q969N4 342 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 FGGYQ96C11 551 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 MRPL38Q96DV4 380 aaKnown RBP4.47□□□□□ -1.69
SMAD4-202ENST00000398417 SLC25A38Q96DW6 304 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 WDR89Q96FK6 387 aaPredicted RBP4.47□□□□□ -1.69
SMAD4-202ENST00000398417 SOSTQ9BQB4 213 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 MFFQ9GZY8 342 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 WBP1LQ9NX94 342 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 GLTPQ9NZD2 209 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 KCNG2Q9UJ96 466 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 ZFC3H1O60293 1989 aaKnown RBP4.47□□□□□ -1.69
SMAD4-202ENST00000398417 YLPM1P49750 1951 aaKnown RBP4.47□□□□□ -1.69
SMAD4-202ENST00000398417 TMEM269A0A1B0GVZ9 245 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 hCG_1807616A0A1W2PRN6 198 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 CREBL2O60519 120 aaPredicted RBP4.47□□□□□ -1.69
SMAD4-202ENST00000398417 POU3F2P20265 443 aaPredicted RBP4.47□□□□□ -1.69
SMAD4-202ENST00000398417 S1PR1P21453 382 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 RPL27P61353 136 aaKnown RBP4.47□□□□□ -1.69
SMAD4-202ENST00000398417 MRPS10P82664 201 aaKnown RBP4.47□□□□□ -1.69
SMAD4-202ENST00000398417 SERTAD2Q14140 314 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF141Q15928 474 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 TMEM205Q6UW68 189 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 FAM198BQ6UWH4 519 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 OR13C9Q8NGT0 318 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 RBPMSQ93062 196 aaKnown RBP4.47□□□□□ -1.69
SMAD4-202ENST00000398417 B9D1Q9UPM9 204 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 TMEM14AQ9Y6G1 99 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 ANKRD36A6QL64 1941 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 BRCA1P38398 1863 aaKnown RBP4.47□□□□□ -1.69
SMAD4-202ENST00000398417 A0A1W2PPC4 97 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 ANGPTL7O43827 346 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 ALOX12BO75342 701 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 IFNA17P01571 189 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 CSF1P09603 554 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 CALCBP10092 127 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 SLC2A1P11166 492 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 CHRNB4P30926 498 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 PPICP45877 212 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 CCINQ13939 588 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 GK2Q14410 553 aaPredicted RBP4.47□□□□□ -1.69
SMAD4-202ENST00000398417 NSDHLQ15738 373 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 GRK1Q15835 563 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF74Q16587 644 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 TOR2AQ5JU69 321 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 COX15Q7KZN9 410 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 KCTD20Q7Z5Y7 419 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 TRAPPC6BQ86SZ2 158 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 CDC20BQ86Y33 519 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 C19orf25Q9UFG5 118 aaPredicted RBP4.47□□□□□ -1.69
SMAD4-202ENST00000398417 KCNN3Q9UGI6 736 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 IGKV1D-42A0A075B6H8 117 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 TRAV1-2A0A0B4J238 106 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 ANKRD20A5PA0PJZ0 165 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 FAM221BA6H8Z2 402 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms