RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 HDDC2Q7Z4H3 204 aa12.52□□□□□ -0.41
SEC13-206ENST00000397102 GOLGA6L1Q8N7Z2 621 aa12.52□□□□□ -0.41
SEC13-206ENST00000397102 OR2Z1Q8NG97 314 aa12.52□□□□□ -0.41
SEC13-206ENST00000397102 OR9I1Q8NGQ6 314 aa12.52□□□□□ -0.41
SEC13-206ENST00000397102 ITLN1Q8WWA0 313 aa12.52□□□□□ -0.41
SEC13-206ENST00000397102 HIST1H2ACQ93077 130 aa12.52□□□□□ -0.41
SEC13-206ENST00000397102 ZNF607Q96SK3 696 aa12.52□□□□□ -0.41
SEC13-206ENST00000397102 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.52□□□□□ -0.41
SEC13-206ENST00000397102 IL19Q9UHD0 177 aa12.52□□□□□ -0.41
SEC13-206ENST00000397102 UGT2A1Q9Y4X1 527 aa12.52□□□□□ -0.41
SEC13-206ENST00000397102 POMT1Q9Y6A1 747 aa12.52□□□□□ -0.41
SEC13-206ENST00000397102 KIR2DS1A0A191URI9 304 aa12.51□□□□□ -0.41
SEC13-206ENST00000397102 A0A1W2PRG6 482 aa12.51□□□□□ -0.41
SEC13-206ENST00000397102 MCIDASD6RGH6 385 aa12.51□□□□□ -0.41
SEC13-206ENST00000397102 SURF4O15260 269 aa12.51□□□□□ -0.41
SEC13-206ENST00000397102 SERPINB7O75635 380 aa12.51□□□□□ -0.41
SEC13-206ENST00000397102 SLC2A10O95528 541 aa12.51□□□□□ -0.41
SEC13-206ENST00000397102 UMPSP11172 480 aa12.51□□□□□ -0.41
SEC13-206ENST00000397102 ACADSP16219 412 aa12.51□□□□□ -0.41
SEC13-206ENST00000397102 ERVK-25P63136 954 aa12.51□□□□□ -0.41
SEC13-206ENST00000397102 TAF11Q15544 211 aa12.51□□□□□ -0.41
SEC13-206ENST00000397102 GPR157Q5UAW9 335 aa12.51□□□□□ -0.41
SEC13-206ENST00000397102 SLC2A7Q6PXP3 512 aa12.51□□□□□ -0.41
SEC13-206ENST00000397102 Q6ZR03 302 aa12.51□□□□□ -0.41
SEC13-206ENST00000397102 NANOGNBQ7Z5D8 188 aa12.51□□□□□ -0.41
SEC13-206ENST00000397102 KLBQ86Z14 1044 aa12.51□□□□□ -0.41
SEC13-206ENST00000397102 ARMC8Q8IUR7 673 aa12.51□□□□□ -0.41
SEC13-206ENST00000397102 ALDH16A1Q8IZ83 802 aa12.51□□□□□ -0.41
SEC13-206ENST00000397102 C10orf111Q8N326 155 aa12.51□□□□□ -0.41
SEC13-206ENST00000397102 ASB10Q8WXI3 467 aa12.51□□□□□ -0.41
SEC13-206ENST00000397102 PLEKHA8Q96JA3 519 aa12.51□□□□□ -0.41
SEC13-206ENST00000397102 MAELQ96JY0 434 aaKnown RBP12.51□□□□□ -0.41
SEC13-206ENST00000397102 FAM71F1Q96KD3 344 aaPredicted RBP12.51□□□□□ -0.41
SEC13-206ENST00000397102 C4orf45Q96LM5 186 aa12.51□□□□□ -0.41
SEC13-206ENST00000397102 OR2H1Q9GZK4 316 aa12.51□□□□□ -0.41
SEC13-206ENST00000397102 SMURF2Q9HAU4 748 aa12.51□□□□□ -0.41
SEC13-206ENST00000397102 SSU72Q9NP77 194 aaKnown RBP12.51□□□□□ -0.41
SEC13-206ENST00000397102 MAN2C1Q9NTJ4 1040 aa12.51□□□□□ -0.41
SEC13-206ENST00000397102 SLC25A37Q9NYZ2 338 aa12.51□□□□□ -0.41
SEC13-206ENST00000397102 MIOXQ9UGB7 285 aa12.51□□□□□ -0.41
SEC13-206ENST00000397102 BLOC1S5-TXNDC5H3BN57 136 aa12.5□□□□□ -0.41
SEC13-206ENST00000397102 IFNL4K9M1U5 179 aa12.5□□□□□ -0.41
SEC13-206ENST00000397102 M0R3H8 397 aa12.5□□□□□ -0.41
SEC13-206ENST00000397102 MELTFP08582 738 aa12.5□□□□□ -0.41
SEC13-206ENST00000397102 GSTM3P21266 225 aa12.5□□□□□ -0.41
SEC13-206ENST00000397102 DAP3P51398 398 aaKnown RBP12.5□□□□□ -0.41
SEC13-206ENST00000397102 MMP16P51512 607 aa12.5□□□□□ -0.41
SEC13-206ENST00000397102 UGT2B15P54855 530 aa12.5□□□□□ -0.41
SEC13-206ENST00000397102 PROK1P58294 105 aa12.5□□□□□ -0.41
SEC13-206ENST00000397102 SCARB2Q14108 478 aa12.5□□□□□ -0.41
SEC13-206ENST00000397102 SGCAQ16586 387 aa12.5□□□□□ -0.41
SEC13-206ENST00000397102 ENTPD8Q5MY95 495 aa12.5□□□□□ -0.41
SEC13-206ENST00000397102 FAM27BQ5VT28 67 aa12.5□□□□□ -0.41
SEC13-206ENST00000397102 ARL9Q6T311 187 aa12.5□□□□□ -0.41
SEC13-206ENST00000397102 ZNF620Q6ZNG0 422 aa12.5□□□□□ -0.41
SEC13-206ENST00000397102 NPEPL1Q8NDH3 523 aa12.5□□□□□ -0.41
SEC13-206ENST00000397102 LINC01006Q8NI28 216 aa12.5□□□□□ -0.41
SEC13-206ENST00000397102 VANGL1Q8TAA9 524 aaPredicted RBP12.5□□□□□ -0.41
SEC13-206ENST00000397102 NEIL1Q96FI4 390 aaPredicted RBP12.5□□□□□ -0.41
SEC13-206ENST00000397102 WNT5BQ9H1J7 359 aa12.5□□□□□ -0.41
SEC13-206ENST00000397102 TMEM38AQ9H6F2 299 aa12.5□□□□□ -0.41
SEC13-206ENST00000397102 TCF7L1Q9HCS4 588 aa12.5□□□□□ -0.41
SEC13-206ENST00000397102 STX18Q9P2W9 335 aaKnown RBP12.5□□□□□ -0.41
SEC13-206ENST00000397102 ASH2LQ9UBL3 628 aa12.5□□□□□ -0.41
SEC13-206ENST00000397102 IGKV1D-43A0A0B4J1Z2 117 aa12.49□□□□□ -0.41
SEC13-206ENST00000397102 CPSF4LA6NMK7 179 aaKnown RBP12.49□□□□□ -0.41
SEC13-206ENST00000397102 KPNA4O00629 521 aaPredicted RBP12.49□□□□□ -0.41
SEC13-206ENST00000397102 LYPD3O95274 346 aa12.49□□□□□ -0.41
SEC13-206ENST00000397102 THY1P04216 161 aa12.49□□□□□ -0.41
SEC13-206ENST00000397102 F13BP05160 661 aa12.49□□□□□ -0.41
SEC13-206ENST00000397102 THRBP10828 461 aa12.49□□□□□ -0.41
SEC13-206ENST00000397102 KITLGP21583 273 aa12.49□□□□□ -0.41
SEC13-206ENST00000397102 TUBG1P23258 451 aa12.49□□□□□ -0.41
SEC13-206ENST00000397102 PPIBP23284 216 aaKnown RBP12.49□□□□□ -0.41
SEC13-206ENST00000397102 SLC6A2P23975 617 aa12.49□□□□□ -0.41
SEC13-206ENST00000397102 AQP1P29972 269 aa12.49□□□□□ -0.41
SEC13-206ENST00000397102 RPL18Q07020 188 aaKnown RBP12.49□□□□□ -0.41
SEC13-206ENST00000397102 LRIF1Q5T3J3 769 aa12.49□□□□□ -0.41
SEC13-206ENST00000397102 SLC27A4Q6P1M0 643 aa12.49□□□□□ -0.41
SEC13-206ENST00000397102 MSRB3Q8IXL7 192 aa12.49□□□□□ -0.41
SEC13-206ENST00000397102 ADAMTS16Q8TE57 1224 aa12.49□□□□□ -0.41
SEC13-206ENST00000397102 DYRK2Q92630 601 aa12.49□□□□□ -0.41
SEC13-206ENST00000397102 NMD3Q96D46 503 aaKnown RBP12.49□□□□□ -0.41
SEC13-206ENST00000397102 MPP4Q96JB8 637 aa12.49□□□□□ -0.41
SEC13-206ENST00000397102 OR2V2Q96R30 315 aa12.49□□□□□ -0.41
SEC13-206ENST00000397102 NUDT16L1Q9BRJ7 211 aaKnown RBP12.49□□□□□ -0.41
SEC13-206ENST00000397102 ZNF426Q9BUY5 554 aa12.49□□□□□ -0.41
SEC13-206ENST00000397102 TMEM109Q9BVC6 243 aa12.49□□□□□ -0.41
SEC13-206ENST00000397102 TMEM165Q9HC07 324 aa12.49□□□□□ -0.41
SEC13-206ENST00000397102 GCM1Q9NP62 436 aa12.49□□□□□ -0.41
SEC13-206ENST00000397102 TUBG2Q9NRH3 451 aa12.49□□□□□ -0.41
SEC13-206ENST00000397102 GMEB1Q9Y692 573 aa12.49□□□□□ -0.41
SEC13-206ENST00000397102 GMNCA6NCL1 334 aa12.48□□□□□ -0.41
SEC13-206ENST00000397102 TNFRSF13BO14836 293 aaPredicted RBP12.48□□□□□ -0.41
SEC13-206ENST00000397102 UBDO15205 165 aa12.48□□□□□ -0.41
SEC13-206ENST00000397102 ABHD16AO95870 558 aa12.48□□□□□ -0.41
SEC13-206ENST00000397102 CST2P09228 141 aa12.48□□□□□ -0.41
SEC13-206ENST00000397102 KITP10721 976 aa12.48□□□□□ -0.41
SEC13-206ENST00000397102 NR2C1P13056 603 aa12.48□□□□□ -0.41
SEC13-206ENST00000397102 FGF12P61328 243 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms