RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 GLULP15104 373 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 NAGAP17050 411 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 HNF1AP20823 631 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 NME2P22392 152 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 TACR1P25103 407 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 ECI1P42126 302 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 OR10A3P58181 314 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 BPIFB3P59826 476 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 FOXK2Q01167 660 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 PMPCAQ10713 525 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 PRDX4Q13162 271 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 ALKBH1Q13686 389 aaKnown RBP6.58□□□□□ -1.36
UPF2-203ENST00000397053 DOC2BQ14184 412 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 KDM4DQ6B0I6 523 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 SMAP2Q8WU79 429 aaPredicted RBP6.58□□□□□ -1.36
UPF2-203ENST00000397053 TVP23CQ96ET8 276 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 ATOH8Q96SQ7 321 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 SLCO5A1Q9H2Y9 848 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 CLMPQ9H6B4 373 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 LYRM4Q9HD34 91 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 ONECUT1Q9UBC0 465 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 RNF24Q9Y225 148 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 TRGV10A0A0A0MS01 117 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 J3KTA2 159 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 SPRY3O43610 288 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 B3GALT4O96024 378 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 MT-ND4LP03901 98 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 GLI4P10075 376 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 SPP1P10451 314 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 CNR1P21554 472 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 LAP3P28838 519 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 EVI2BP34910 448 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 MNX1P50219 401 aaPredicted RBP6.58□□□□□ -1.36
UPF2-203ENST00000397053 HLA-BQ31612 363 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 SMIM21Q3B7S5 101 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 SYT6Q5T7P8 510 aaPredicted RBP6.58□□□□□ -1.36
UPF2-203ENST00000397053 HENMT1Q5T8I9 393 aaKnown RBP6.58□□□□□ -1.36
UPF2-203ENST00000397053 CST9Q5W186 159 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 DESI1Q6ICB0 168 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 DGAT2L7PQ6IED9 249 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 PRR7Q8TB68 274 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 KCTD12Q96CX2 325 aaKnown RBP6.58□□□□□ -1.36
UPF2-203ENST00000397053 JAM3Q9BX67 310 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 BANF2Q9H503 90 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 RAB18Q9NP72 206 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 TNFRSF19Q9NS68 423 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 EBF1Q9UH73 591 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 PURGQ9UJV8 347 aaKnown RBP6.58□□□□□ -1.36
UPF2-203ENST00000397053 MEIOCA2RUB1 952 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 GPR37O15354 613 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 SBK2P0C263 348 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 CR2P20023 1033 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 PSMB1P20618 241 aaKnown RBP6.58□□□□□ -1.36
UPF2-203ENST00000397053 NKX2-1P43699 371 aaPredicted RBP6.58□□□□□ -1.36
UPF2-203ENST00000397053 HFEQ30201 348 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 PLAC9Q5JTB6 97 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 C1orf220Q5T0J3 134 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 FAM122CQ6P4D5 195 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 MDGA2Q7Z553 956 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 NLRP8Q86W28 1048 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 PLPP7Q8NBV4 271 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 SLCO4A1Q96BD0 722 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 FAM3DQ96BQ1 224 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 MVB12AQ96EY5 273 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 CCDC74BQ96LY2 380 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 OPALINQ96PE5 141 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 ZNF436Q9C0F3 470 aaPredicted RBP6.58□□□□□ -1.36
UPF2-203ENST00000397053 HAPLN2Q9GZV7 340 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 MBNL1Q9NR56 388 aaKnown RBP6.58□□□□□ -1.36
UPF2-203ENST00000397053 TREX1Q9NSU2 369 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 MED9Q9NWA0 146 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 WDR37Q9Y2I8 494 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 COL2A1P02458 1487 aaPredicted RBP6.58□□□□□ -1.36
UPF2-203ENST00000397053 TRBV4-1A0A0J9YWV2 114 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 CLDN24A6NM45 220 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 NUPL2O15504 423 aaKnown RBP6.58□□□□□ -1.36
UPF2-203ENST00000397053 OR2J2O76002 312 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 ST6GAL1P15907 406 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 NPY4RP50391 375 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 SNRPGP62308 76 aaKnown RBP6.58□□□□□ -1.36
UPF2-203ENST00000397053 TAF9Q16594 264 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 Q1RN00 199 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 STEAP1BQ6NZ63 245 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 RFPL4BQ6ZWI9 263 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 ADGRE4PQ86SQ3 457 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 AMIGO3Q86WK7 504 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 C11orf42Q8N5U0 333 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 CLDN22Q8N7P3 220 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 OR1J1Q8NGS3 322 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 LGALS14Q8TCE9 139 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 RPEQ96AT9 228 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 RASD2Q96D21 266 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 OR2A14Q96R47 310 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 ZIC5Q96T25 663 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 GORASP2Q9H8Y8 452 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 DAPP1Q9UN19 280 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 PPP1R3CQ9UQK1 317 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 CABIN1Q9Y6J0 2220 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 A0A0B4J203 849 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 TERTO14746 1132 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms