RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 FAM227AF5H4B4 570 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 SGCEO43556 437 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 IL2RAP01589 272 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 FUCA1P04066 466 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 ARTNQ5T4W7 220 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 DRAM2Q6UX65 266 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 ARRDC1Q8N5I2 433 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 OR51L1Q8NGJ5 315 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 NICN1Q9BSH3 213 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 GON7Q9BXV9 100 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 SLIRPQ9GZT3 109 aaKnown RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 REV1Q9UBZ9 1251 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 KCNN3Q9UGI6 736 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 ATXN7L1Q9ULK2 861 aaPredicted RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 EXOGQ9Y2C4 368 aaKnown RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 CFAP46Q8IYW2 2715 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 SZT2Q5T011 3432 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 PRRG2O14669 202 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 OR2J2O76002 312 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 SELEP16581 610 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 STARP49675 285 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 EIF2B1Q14232 305 aaKnown RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 XAF1Q6GPH4 301 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 ACSM5Q6NUN0 579 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF767PQ75MW2 155 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 LSRQ86X29 649 aaPredicted RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 MRPL41Q8IXM3 137 aaKnown RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 PELI1Q96FA3 418 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 DCLRE1CQ96SD1 692 aaKnown RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 ATG5Q9H1Y0 275 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 ADAM18Q9Y3Q7 739 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 F5H5K5 113 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 TPOP07202 933 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 MAKP20794 623 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 PSMA6P60900 246 aaKnown RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 UBE2MP61081 183 aaKnown RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 CDC20Q12834 499 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 CDONQ4KMG0 1287 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 NAXDQ8IW45 347 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 PRR22Q8IZ63 422 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 DRAXINQ8NBI3 349 aaPredicted RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 ZBTB44Q8NCP5 570 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 ANKRD9Q96BM1 317 aaPredicted RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 MED30Q96HR3 178 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 ANKRD30BLA7E2S9 258 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 ABHD16AO95870 558 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 TNFSF8P32971 234 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 HERV-K104P61576 105 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 YBX1P67809 324 aaKnown RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 MYBPHQ13203 477 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF627Q7L945 461 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 UBQLNLQ8IYU4 475 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 OR6V1Q8N148 313 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 OR2G2Q8NGZ5 317 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 TRAF4Q9BUZ4 470 aaPredicted RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 OR51E2Q9H255 320 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 ARRDC1-AS1Q9H2J1 176 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 CGGBP1Q9UFW8 167 aaPredicted RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 NOSIPQ9Y314 301 aaKnown RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 LOC100289279A0A1B0GTE1 492 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 KRBA1A5PL33 1030 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 BHLHE40O14503 412 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 CSO75390 466 aaKnown RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 WDPCPO95876 746 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 IRF2P14316 349 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 IFNGR1P15260 489 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 HOXC5Q00444 222 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 ASAH1Q13510 395 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 GNMTQ14749 295 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF565Q8N9K5 539 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 TBC1D15Q8TC07 691 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 RPL3LQ92901 407 aaKnown RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 OR8B4Q96RC9 309 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 MBOAT4Q96T53 435 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 UNKLQ9H9P5 680 aaKnown RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 COQ3Q9NZJ6 369 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 PFDN2Q9UHV9 154 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 SH2B3Q9UQQ2 575 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 MRPS18CQ9Y3D5 142 aaKnown RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 R4GMQ9 66 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 SLC22A23A1A5C7 686 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 FFAR1O14842 300 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 FBXO45P0C2W1 286 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 EPHA2P29317 976 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF136P52737 540 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 BTG1P62324 171 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 SKP2Q13309 424 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF684Q5T5D7 378 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 USP22Q9UPT9 525 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 FOXJ3Q9UPW0 622 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF354AO60765 605 aaPredicted RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 SC5DO75845 299 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 GYPBP06028 91 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 GSTP1P09211 210 aaKnown RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 SOX2P48431 317 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 GK2Q14410 553 aaPredicted RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 TMEM121BQ9BXQ6 578 aaPredicted RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 OR52A1Q9UKL2 312 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 hCG_1809904A0A1W2PP81 198 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 A0A1W2PPE2 198 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms