RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 SLC6A9P48067 706 aa17.8■□□□□ 0.44
TRAF4-203ENST00000394925 IL13RA1P78552 427 aa17.8■□□□□ 0.44
TRAF4-203ENST00000394925 MTX3Q5HYI7 312 aa17.8■□□□□ 0.44
TRAF4-203ENST00000394925 NKAIN4Q8IVV8 208 aa17.8■□□□□ 0.44
TRAF4-203ENST00000394925 ALDH16A1Q8IZ83 802 aa17.8■□□□□ 0.44
TRAF4-203ENST00000394925 NMD3Q96D46 503 aaKnown RBP17.8■□□□□ 0.44
TRAF4-203ENST00000394925 SGTBQ96EQ0 304 aa17.8■□□□□ 0.44
TRAF4-203ENST00000394925 C7orf26Q96N11 449 aa17.8■□□□□ 0.44
TRAF4-203ENST00000394925 OR2H1Q9GZK4 316 aa17.8■□□□□ 0.44
TRAF4-203ENST00000394925 MS4A7Q9GZW8 240 aaPredicted RBP17.8■□□□□ 0.44
TRAF4-203ENST00000394925 C20orf141Q9NUB4 165 aa17.8■□□□□ 0.44
TRAF4-203ENST00000394925 POLR3KQ9Y2Y1 108 aaPredicted RBP17.8■□□□□ 0.44
TRAF4-203ENST00000394925 POM121CA8CG34 1229 aa17.79■□□□□ 0.44
TRAF4-203ENST00000394925 H3BSA7 217 aa17.79■□□□□ 0.44
TRAF4-203ENST00000394925 LAP3P28838 519 aa17.79■□□□□ 0.44
TRAF4-203ENST00000394925 ARHGDIAP52565 204 aa17.79■□□□□ 0.44
TRAF4-203ENST00000394925 PSG7Q13046 419 aa17.79■□□□□ 0.44
TRAF4-203ENST00000394925 CDK5R2Q13319 367 aa17.79■□□□□ 0.44
TRAF4-203ENST00000394925 LAPTM4AQ15012 233 aa17.79■□□□□ 0.44
TRAF4-203ENST00000394925 TAF11Q15544 211 aa17.79■□□□□ 0.44
TRAF4-203ENST00000394925 FAM27BQ5VT28 67 aa17.79■□□□□ 0.44
TRAF4-203ENST00000394925 ZNF774Q6NX45 483 aa17.79■□□□□ 0.44
TRAF4-203ENST00000394925 SLC25A47Q6Q0C1 308 aa17.79■□□□□ 0.44
TRAF4-203ENST00000394925 TMEM255BQ8WV15 326 aa17.79■□□□□ 0.44
TRAF4-203ENST00000394925 TLCD1Q96CP7 247 aa17.79■□□□□ 0.44
TRAF4-203ENST00000394925 C4orf45Q96LM5 186 aa17.79■□□□□ 0.44
TRAF4-203ENST00000394925 CGREF1Q99674 301 aa17.79■□□□□ 0.44
TRAF4-203ENST00000394925 ELOVL3Q9HB03 270 aa17.79■□□□□ 0.44
TRAF4-203ENST00000394925 SLC9A3R2Q15599 337 aa17.78■□□□□ 0.44
TRAF4-203ENST00000394925 TMEM155Q4W5P6 130 aa17.78■□□□□ 0.44
TRAF4-203ENST00000394925 MIDNQ504T8 468 aa17.78■□□□□ 0.44
TRAF4-203ENST00000394925 LRRC28Q86X40 367 aaPredicted RBP17.78■□□□□ 0.44
TRAF4-203ENST00000394925 SLC30A8Q8IWU4 369 aa17.78■□□□□ 0.44
TRAF4-203ENST00000394925 ZNF283Q8N7M2 679 aa17.78■□□□□ 0.44
TRAF4-203ENST00000394925 TXNIPQ9H3M7 391 aa17.78■□□□□ 0.44
TRAF4-203ENST00000394925 TIMM10BQ9Y5J6 103 aa17.78■□□□□ 0.44
TRAF4-203ENST00000394925 NOTCH1P46531 2555 aa17.78■□□□□ 0.44
TRAF4-203ENST00000394925 IGHV3OR16-10A0A075B7F0 116 aa17.77■□□□□ 0.44
TRAF4-203ENST00000394925 ICMTO60725 284 aa17.77■□□□□ 0.44
TRAF4-203ENST00000394925 CST2P09228 141 aa17.77■□□□□ 0.44
TRAF4-203ENST00000394925 TNFSF4P23510 183 aa17.77■□□□□ 0.44
TRAF4-203ENST00000394925 PCGF2P35227 344 aa17.77■□□□□ 0.44
TRAF4-203ENST00000394925 RBM34P42696 430 aaKnown RBP17.77■□□□□ 0.44
TRAF4-203ENST00000394925 TAS2R41P59536 307 aa17.77■□□□□ 0.44
TRAF4-203ENST00000394925 BTG1P62324 171 aa17.77■□□□□ 0.44
TRAF4-203ENST00000394925 TOP3AQ13472 1001 aaPredicted RBP17.77■□□□□ 0.44
TRAF4-203ENST00000394925 ZMYND11Q15326 602 aa17.77■□□□□ 0.44
TRAF4-203ENST00000394925 LEG1Q6P5S2 330 aa17.77■□□□□ 0.44
TRAF4-203ENST00000394925 ZER1Q7Z7L7 766 aa17.77■□□□□ 0.44
TRAF4-203ENST00000394925 JAZF1Q86VZ6 243 aa17.77■□□□□ 0.44
TRAF4-203ENST00000394925 CLDN22Q8N7P3 220 aa17.77■□□□□ 0.44
TRAF4-203ENST00000394925 OR2Z1Q8NG97 314 aa17.77■□□□□ 0.44
TRAF4-203ENST00000394925 OR10A6Q8NH74 314 aa17.77■□□□□ 0.44
TRAF4-203ENST00000394925 TMEM239Q8WW34 195 aa17.77■□□□□ 0.44
TRAF4-203ENST00000394925 SAMD8Q96LT4 415 aa17.77■□□□□ 0.44
TRAF4-203ENST00000394925 KAT8Q9H7Z6 458 aaKnown RBP17.77■□□□□ 0.44
TRAF4-203ENST00000394925 SH3GLB1Q9Y371 365 aa17.77■□□□□ 0.44
TRAF4-203ENST00000394925 NDUFAF1Q9Y375 327 aa17.77■□□□□ 0.44
TRAF4-203ENST00000394925 SOX21Q9Y651 276 aaPredicted RBP17.77■□□□□ 0.44
TRAF4-203ENST00000394925 GMNCA6NCL1 334 aa17.76■□□□□ 0.43
TRAF4-203ENST00000394925 A8MXK9 166 aa17.76■□□□□ 0.43
TRAF4-203ENST00000394925 CLDN34H7C241 214 aa17.76■□□□□ 0.43
TRAF4-203ENST00000394925 SHOX2O60902 331 aaPredicted RBP17.76■□□□□ 0.43
TRAF4-203ENST00000394925 GPANK1O95872 356 aa17.76■□□□□ 0.43
TRAF4-203ENST00000394925 TSPAN19P0C672 248 aa17.76■□□□□ 0.43
TRAF4-203ENST00000394925 IGHV4-38-2P0DP08 117 aa17.76■□□□□ 0.43
TRAF4-203ENST00000394925 NR2C1P13056 603 aa17.76■□□□□ 0.43
TRAF4-203ENST00000394925 TNFRSF1AP19438 455 aa17.76■□□□□ 0.43
TRAF4-203ENST00000394925 TNFRSF1BP20333 461 aa17.76■□□□□ 0.43
TRAF4-203ENST00000394925 MDKP21741 143 aaPredicted RBP17.76■□□□□ 0.43
TRAF4-203ENST00000394925 CRYBA2P53672 197 aa17.76■□□□□ 0.43
TRAF4-203ENST00000394925 PCBD1P61457 104 aa17.76■□□□□ 0.43
TRAF4-203ENST00000394925 ESCO2Q56NI9 601 aa17.76■□□□□ 0.43
TRAF4-203ENST00000394925 INTS11Q5TA45 600 aaKnown RBP17.76■□□□□ 0.43
TRAF4-203ENST00000394925 ARL9Q6T311 187 aa17.76■□□□□ 0.43
TRAF4-203ENST00000394925 DPP10Q8N608 796 aa17.76■□□□□ 0.43
TRAF4-203ENST00000394925 OR52E2Q8NGJ4 325 aa17.76■□□□□ 0.43
TRAF4-203ENST00000394925 RASSF5Q8WWW0 418 aa17.76■□□□□ 0.43
TRAF4-203ENST00000394925 RBP7Q96R05 134 aa17.76■□□□□ 0.43
TRAF4-203ENST00000394925 SLITRK2Q9H156 845 aa17.76■□□□□ 0.43
TRAF4-203ENST00000394925 POFUT1Q9H488 388 aa17.76■□□□□ 0.43
TRAF4-203ENST00000394925 TMBIM4Q9HC24 238 aa17.76■□□□□ 0.43
TRAF4-203ENST00000394925 OR5V1Q9UGF6 321 aa17.76■□□□□ 0.43
TRAF4-203ENST00000394925 NPIPB13A6NJU9 1138 aa17.75■□□□□ 0.43
TRAF4-203ENST00000394925 NPIPB4C9JG80 1138 aa17.75■□□□□ 0.43
TRAF4-203ENST00000394925 F5H0A9 414 aaPredicted RBP17.75■□□□□ 0.43
TRAF4-203ENST00000394925 ABHD16AO95870 558 aa17.75■□□□□ 0.43
TRAF4-203ENST00000394925 GSTM3P21266 225 aa17.75■□□□□ 0.43
TRAF4-203ENST00000394925 CD80P33681 288 aa17.75■□□□□ 0.43
TRAF4-203ENST00000394925 GUCA1AP43080 201 aaPredicted RBP17.75■□□□□ 0.43
TRAF4-203ENST00000394925 MTNR1AP48039 350 aa17.75■□□□□ 0.43
TRAF4-203ENST00000394925 PAX8Q06710 450 aa17.75■□□□□ 0.43
TRAF4-203ENST00000394925 PIN1Q13526 163 aaPredicted RBP17.75■□□□□ 0.43
TRAF4-203ENST00000394925 ALG10Q5BKT4 473 aa17.75■□□□□ 0.43
TRAF4-203ENST00000394925 Q6ZR03 302 aa17.75■□□□□ 0.43
TRAF4-203ENST00000394925 LRRC8CQ8TDW0 803 aa17.75■□□□□ 0.43
TRAF4-203ENST00000394925 ITLN1Q8WWA0 313 aa17.75■□□□□ 0.43
TRAF4-203ENST00000394925 LIPHQ8WWY8 451 aa17.75■□□□□ 0.43
TRAF4-203ENST00000394925 SIGLEC11Q96RL6 698 aa17.75■□□□□ 0.43
TRAF4-203ENST00000394925 ALG12Q9BV10 488 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms