RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 ZNF44P15621 663 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 FGF9P31371 208 aaPredicted RBP5.19□□□□□ -1.58
RFFL-202ENST00000394597 TRHRP34981 398 aaPredicted RBP5.19□□□□□ -1.58
RFFL-202ENST00000394597 MAP3K8P41279 467 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 OR3A2P47893 321 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 ACTA2P62736 377 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 ACTG2P63267 376 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 ACTC1P68032 377 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 ACTA1P68133 377 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 ARF1P84077 181 aaKnown RBP5.19□□□□□ -1.58
RFFL-202ENST00000394597 ARHGAP11BQ3KRB8 267 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 TP53I3Q53FA7 332 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 PLA1AQ53H76 456 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 UBE2NLQ5JXB2 153 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 DCAF12Q5T6F0 453 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 TIPARPQ7Z3E1 657 aaKnown RBP5.19□□□□□ -1.58
RFFL-202ENST00000394597 ZNF687Q8N1G0 1237 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 SUMF2Q8NBJ7 301 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 ABHD4Q8TB40 342 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 GCDHQ92947 438 aaPredicted RBP5.19□□□□□ -1.58
RFFL-202ENST00000394597 MRPS24Q96EL2 167 aaKnown RBP5.19□□□□□ -1.58
RFFL-202ENST00000394597 SCARF2Q96GP6 870 aaPredicted RBP5.19□□□□□ -1.58
RFFL-202ENST00000394597 LCORQ96JN0 433 aaPredicted RBP5.19□□□□□ -1.58
RFFL-202ENST00000394597 C4orf36Q96KX1 117 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 ABHD1Q96SE0 405 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 VPS25Q9BRG1 176 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 BCL2L10Q9HD36 194 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 TESQ9UGI8 421 aaKnown RBP5.19□□□□□ -1.58
RFFL-202ENST00000394597 CHST2Q9Y4C5 530 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 NPFFR2Q9Y5X5 522 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 IGHV1OR21-1A0A087WYE8 117 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 OR5H14A6NHG9 310 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 ZNF729A6NN14 1252 aaPredicted RBP5.18□□□□□ -1.58
RFFL-202ENST00000394597 GABARAPH6UMI1 98 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 SOX1O00570 391 aaPredicted RBP5.18□□□□□ -1.58
RFFL-202ENST00000394597 MAGEB4O15481 346 aaPredicted RBP5.18□□□□□ -1.58
RFFL-202ENST00000394597 P2RX6O15547 441 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 OR2C1O95371 312 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 SCGB1D1O95968 90 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 IFNA21P01568 189 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 PMP2P02689 132 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 MYF5P13349 255 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 PRF1P14222 555 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 CXCL2P19875 107 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 LAP3P28838 519 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 PCBP4P57723 403 aaKnown RBP5.18□□□□□ -1.58
RFFL-202ENST00000394597 SKP2Q13309 424 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 HYAL4Q2M3T9 481 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 NKAIN1Q4KMZ8 207 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 KLHL24Q6TFL4 600 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 GLDNQ6ZMI3 551 aaPredicted RBP5.18□□□□□ -1.58
RFFL-202ENST00000394597 Q6ZTK2 550 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 ACOT7LQ6ZUV0 252 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 OLIG3Q7RTU3 272 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 GLB1L2Q8IW92 636 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 FAM26EQ8N5C1 309 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 KCNRGQ8N5I3 272 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 RCBTB1Q8NDN9 531 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 DIO2Q92813 273 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 ADAD1Q96M93 576 aaKnown RBP5.18□□□□□ -1.58
RFFL-202ENST00000394597 OR1F2PQ96R84 312 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 SDF2Q99470 211 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 ULBP3Q9BZM4 244 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 NXT1Q9UKK6 140 aaKnown RBP5.18□□□□□ -1.58
RFFL-202ENST00000394597 CDC14CA4D256 554 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 A8MXK9 166 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 NPIPA5E9PKD4 350 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 CCSO14618 274 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 LANCL1O43813 399 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 ACAA1P09110 424 aaPredicted RBP5.18□□□□□ -1.58
RFFL-202ENST00000394597 CHATP28329 748 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 MVDP53602 400 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 BTG2P78543 158 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 ZXDAP98168 799 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 SLC14A1Q13336 389 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 OR7A5Q15622 319 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 ELAVL1Q15717 326 aaKnown RBP5.18□□□□□ -1.58
RFFL-202ENST00000394597 SOHLH1Q5JUK2 328 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 DNM1P34Q6PK57 102 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 COMTD1Q86VU5 262 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 LDLRAD3Q86YD5 345 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 MCEMP1Q8IX19 187 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 SLC35F3Q8IY50 421 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 RNF113BQ8IZP6 322 aaKnown RBP5.18□□□□□ -1.58
RFFL-202ENST00000394597 CARFQ8N187 725 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 JAGN1Q8N5M9 183 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 FAM24BQ8N5W8 94 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 C15orf54Q8N8G6 183 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 OR6T1Q8NGN1 323 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 CPNE4Q96A23 557 aaPredicted RBP5.18□□□□□ -1.58
RFFL-202ENST00000394597 SAMD8Q96LT4 415 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 DPH1Q9BZG8 443 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 ARRDC1-AS1Q9H2J1 176 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 UCK1Q9HA47 277 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 SPACA1Q9HBV2 294 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 PISDQ9UG56 409 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 NPIPA1Q9UND3 350 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 FAM96BQ9Y3D0 163 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 DMRT1Q9Y5R6 373 aa5.18□□□□□ -1.58
RFFL-202ENST00000394597 WIF1Q9Y5W5 379 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms