RNA–Protein interactions for RNA: ENST00000393606.7

UBTF-203, Transcript of upstream binding transcription factor, humanhuman

TSL 1 (best) BASIC

Gene UBTF, Length 2,683 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTF-203ENST00000393606 DNASE2O00115 360 aaPredicted RBP17.47■□□□□ 0.39
UBTF-203ENST00000393606 RP2O75695 350 aa17.47■□□□□ 0.39
UBTF-203ENST00000393606 RBBP9O75884 186 aa17.47■□□□□ 0.39
UBTF-203ENST00000393606 BGLAPP02818 100 aa17.47■□□□□ 0.39
UBTF-203ENST00000393606 GP1BBP13224 206 aa17.47■□□□□ 0.39
UBTF-203ENST00000393606 FBLP22087 321 aaKnown RBP17.47■□□□□ 0.39
UBTF-203ENST00000393606 EEF1A1P5Q5VTE0 462 aa17.47■□□□□ 0.39
UBTF-203ENST00000393606 MUC20Q8N307 709 aaPredicted RBP17.47■□□□□ 0.39
UBTF-203ENST00000393606 LAT2Q9GZY6 243 aa17.47■□□□□ 0.39
UBTF-203ENST00000393606 MED12Q93074 2177 aa17.47■□□□□ 0.39
UBTF-203ENST00000393606 TUBAL3A6NHL2 446 aa17.46■□□□□ 0.39
UBTF-203ENST00000393606 OPN1LWP04000 364 aa17.46■□□□□ 0.39
UBTF-203ENST00000393606 CTLA4P16410 223 aa17.46■□□□□ 0.39
UBTF-203ENST00000393606 RAB3AP20336 220 aa17.46■□□□□ 0.39
UBTF-203ENST00000393606 ADAM8P78325 824 aa17.46■□□□□ 0.39
UBTF-203ENST00000393606 MRPS10P82664 201 aaKnown RBP17.46■□□□□ 0.39
UBTF-203ENST00000393606 SMAD2Q15796 467 aaKnown RBP17.46■□□□□ 0.39
UBTF-203ENST00000393606 C14orf28Q4W4Y0 310 aa17.46■□□□□ 0.39
UBTF-203ENST00000393606 SLC36A1Q7Z2H8 476 aa17.46■□□□□ 0.39
UBTF-203ENST00000393606 PNPLA2Q96AD5 504 aa17.46■□□□□ 0.39
UBTF-203ENST00000393606 CHST6Q9GZX3 395 aa17.46■□□□□ 0.39
UBTF-203ENST00000393606 TMEM138Q9NPI0 162 aa17.46■□□□□ 0.39
UBTF-203ENST00000393606 UBE2QL1A1L167 161 aa17.46■□□□□ 0.39
UBTF-203ENST00000393606 METTL12A8MUP2 240 aa17.46■□□□□ 0.39
UBTF-203ENST00000393606 SHISA8B8ZZ34 492 aa17.46■□□□□ 0.39
UBTF-203ENST00000393606 DLX5P56178 289 aa17.46■□□□□ 0.39
UBTF-203ENST00000393606 HSD11B2P80365 405 aa17.46■□□□□ 0.39
UBTF-203ENST00000393606 COL13A1Q5TAT6 717 aaPredicted RBP17.46■□□□□ 0.39
UBTF-203ENST00000393606 OR51S1Q8NGJ8 323 aa17.46■□□□□ 0.39
UBTF-203ENST00000393606 GPR148Q8TDV2 347 aa17.46■□□□□ 0.39
UBTF-203ENST00000393606 UTP23Q9BRU9 249 aaKnown RBP17.46■□□□□ 0.39
UBTF-203ENST00000393606 PELOQ9BRX2 385 aaKnown RBP17.46■□□□□ 0.39
UBTF-203ENST00000393606 TMPRSS13Q9BYE2 586 aa17.46■□□□□ 0.39
UBTF-203ENST00000393606 WWTR1Q9GZV5 400 aa17.46■□□□□ 0.39
UBTF-203ENST00000393606 DUSP15Q9H1R2 295 aaPredicted RBP17.46■□□□□ 0.39
UBTF-203ENST00000393606 SLC2A4RGQ9NR83 387 aa17.46■□□□□ 0.39
UBTF-203ENST00000393606 GPR160Q9UJ42 338 aa17.46■□□□□ 0.39
UBTF-203ENST00000393606 MRTO4Q9UKD2 239 aaKnown RBP17.46■□□□□ 0.39
UBTF-203ENST00000393606 B9D1Q9UPM9 204 aa17.46■□□□□ 0.39
UBTF-203ENST00000393606 MTCH2Q9Y6C9 303 aa17.46■□□□□ 0.39
UBTF-203ENST00000393606 TMED7-TICAM2A0A0A6YYA0 188 aa17.45■□□□□ 0.38
UBTF-203ENST00000393606 SOX1O00570 391 aaPredicted RBP17.45■□□□□ 0.38
UBTF-203ENST00000393606 GLAP06280 429 aa17.45■□□□□ 0.38
UBTF-203ENST00000393606 MFGE8Q08431 387 aaPredicted RBP17.45■□□□□ 0.38
UBTF-203ENST00000393606 DMWDQ09019 674 aa17.45■□□□□ 0.38
UBTF-203ENST00000393606 RBMS2Q15434 407 aaKnown RBP17.45■□□□□ 0.38
UBTF-203ENST00000393606 BIVMQ86UB2 503 aa17.45■□□□□ 0.38
UBTF-203ENST00000393606 VN1R1Q9GZP7 353 aa17.45■□□□□ 0.38
UBTF-203ENST00000393606 ZMAT3Q9HA38 289 aaKnown RBP17.45■□□□□ 0.38
UBTF-203ENST00000393606 COPS7AQ9UBW8 275 aa17.45■□□□□ 0.38
UBTF-203ENST00000393606 ATXN7L1Q9ULK2 861 aaPredicted RBP17.45■□□□□ 0.38
UBTF-203ENST00000393606 TMED7Q9Y3B3 224 aa17.45■□□□□ 0.38
UBTF-203ENST00000393606 CNTRLQ7Z7A1 2325 aa17.45■□□□□ 0.38
UBTF-203ENST00000393606 TRAV18A0A075B6X5 111 aa17.45■□□□□ 0.38
UBTF-203ENST00000393606 FITM1A5D6W6 292 aa17.45■□□□□ 0.38
UBTF-203ENST00000393606 OR6C65A6NJZ3 312 aa17.45■□□□□ 0.38
UBTF-203ENST00000393606 ITGA5P08648 1049 aa17.45■□□□□ 0.38
UBTF-203ENST00000393606 GABRA1P14867 456 aa17.45■□□□□ 0.38
UBTF-203ENST00000393606 MAPK3P27361 379 aaPredicted RBP17.45■□□□□ 0.38
UBTF-203ENST00000393606 INSM1Q01101 510 aaPredicted RBP17.45■□□□□ 0.38
UBTF-203ENST00000393606 ELAVL1Q15717 326 aaKnown RBP17.45■□□□□ 0.38
UBTF-203ENST00000393606 OVCH2Q7RTZ1 564 aa17.45■□□□□ 0.38
UBTF-203ENST00000393606 OTOSQ8NHW6 89 aa17.45■□□□□ 0.38
UBTF-203ENST00000393606 ZNF417Q8TAU3 575 aa17.45■□□□□ 0.38
UBTF-203ENST00000393606 ZNF587Q96SQ5 575 aaPredicted RBP17.45■□□□□ 0.38
UBTF-203ENST00000393606 EXOSC3Q9NQT5 275 aaKnown RBP17.45■□□□□ 0.38
UBTF-203ENST00000393606 VDAC3Q9Y277 283 aa17.45■□□□□ 0.38
UBTF-203ENST00000393606 SESN1Q9Y6P5 492 aa17.45■□□□□ 0.38
UBTF-203ENST00000393606 TRAV36DV7A0A075B6V5 113 aa17.44■□□□□ 0.38
UBTF-203ENST00000393606 IGKV3D-11A0A0A0MRZ8 115 aa17.44■□□□□ 0.38
UBTF-203ENST00000393606 TRBV5-5A0A0J9YX44 114 aa17.44■□□□□ 0.38
UBTF-203ENST00000393606 H7C417 338 aa17.44■□□□□ 0.38
UBTF-203ENST00000393606 POLR2GP62487 172 aaKnown RBP eCLIP17.44■□□□□ 0.38
UBTF-203ENST00000393606 FMODQ06828 376 aa17.44■□□□□ 0.38
UBTF-203ENST00000393606 SLC29A4Q7RTT9 530 aa17.44■□□□□ 0.38
UBTF-203ENST00000393606 KRT77Q7Z794 578 aa17.44■□□□□ 0.38
UBTF-203ENST00000393606 ZNF227Q86WZ6 799 aa17.44■□□□□ 0.38
UBTF-203ENST00000393606 LINC00346Q8IVM7 164 aa17.44■□□□□ 0.38
UBTF-203ENST00000393606 OR2AK2Q8NG84 335 aa17.44■□□□□ 0.38
UBTF-203ENST00000393606 STK35Q8TDR2 534 aa17.44■□□□□ 0.38
UBTF-203ENST00000393606 SCARB1Q8WTV0 552 aa17.44■□□□□ 0.38
UBTF-203ENST00000393606 TNFAIP8L1Q8WVP5 186 aa17.44■□□□□ 0.38
UBTF-203ENST00000393606 LIPHQ8WWY8 451 aa17.44■□□□□ 0.38
UBTF-203ENST00000393606 PTDSS2Q9BVG9 487 aa17.44■□□□□ 0.38
UBTF-203ENST00000393606 MRPL22Q9NWU5 206 aaKnown RBP17.44■□□□□ 0.38
UBTF-203ENST00000393606 MTFP1Q9UDX5 166 aa17.44■□□□□ 0.38
UBTF-203ENST00000393606 CDV3Q9UKY7 258 aaKnown RBP17.44■□□□□ 0.38
UBTF-203ENST00000393606 FER1L5A0AVI2 2057 aa17.44■□□□□ 0.38
UBTF-203ENST00000393606 TMEM272A0A1B0GTI8 110 aa17.44■□□□□ 0.38
UBTF-203ENST00000393606 EIF1AYO14602 144 aaKnown RBP17.44■□□□□ 0.38
UBTF-203ENST00000393606 SMAD9O15198 467 aaKnown RBP17.44■□□□□ 0.38
UBTF-203ENST00000393606 XRCC3O43542 346 aa17.44■□□□□ 0.38
UBTF-203ENST00000393606 SPDEFO95238 335 aa17.44■□□□□ 0.38
UBTF-203ENST00000393606 TXNDC12O95881 172 aa17.44■□□□□ 0.38
UBTF-203ENST00000393606 IGF2P01344 180 aa17.44■□□□□ 0.38
UBTF-203ENST00000393606 APEHP13798 732 aaKnown RBP17.44■□□□□ 0.38
UBTF-203ENST00000393606 GTF2F2P13984 249 aa17.44■□□□□ 0.38
UBTF-203ENST00000393606 MECP2P51608 486 aaKnown RBP17.44■□□□□ 0.38
UBTF-203ENST00000393606 C11orf88Q6PI97 169 aa17.44■□□□□ 0.38
UBTF-203ENST00000393606 GSG1LQ6UXU4 331 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms