RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 VSTM2BA6NLU5 285 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 MPZL2O60487 215 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 SC5DO75845 299 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 NCR1O76036 304 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 PTNP21246 168 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 MSX1P28360 303 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 MPGP29372 298 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 KIR3DL2P43630 455 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 RAB5CP51148 216 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 RGS8P57771 180 aaPredicted RBP17.13■□□□□ 0.33
CCDC50-202ENST00000392456 CLINT1Q14677 625 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 CRTC2Q53ET0 693 aaPredicted RBP17.13■□□□□ 0.33
CCDC50-202ENST00000392456 SLC30A6Q6NXT4 461 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 SPNS3Q6ZMD2 512 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 SSX6Q7RTT6 188 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 ZNF227Q86WZ6 799 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 ADIPOR1Q96A54 375 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 C1GALT1C1Q96EU7 318 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 GAL3ST4Q96RP7 486 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 ULBP3Q9BZM4 244 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 SLC13A4Q9UKG4 626 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 GSTK1Q9Y2Q3 226 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 A0A1W2PNU3 283 aaPredicted RBP17.13■□□□□ 0.33
CCDC50-202ENST00000392456 CDHR4A6H8M9 788 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 AK1P00568 194 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 CRYABP02511 175 aaKnown RBP17.13■□□□□ 0.33
CCDC50-202ENST00000392456 DBIP07108 87 aaKnown RBP17.13■□□□□ 0.33
CCDC50-202ENST00000392456 AKR1C2P52895 323 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 AKR1C1Q04828 323 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 ATPAF1Q5TC12 328 aaPredicted RBP17.13■□□□□ 0.33
CCDC50-202ENST00000392456 RNLSQ5VYX0 342 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 PODNL1Q6PEZ8 512 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 C16orf47Q6ZP98 133 aaPredicted RBP17.13■□□□□ 0.33
CCDC50-202ENST00000392456 PTCHD4Q6ZW05 846 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 ANKRD37Q7Z713 158 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 AQP11Q8NBQ7 271 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 RAB3CQ96E17 227 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 CYSLTR2Q9NS75 346 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 PRODH2Q9UF12 536 aa17.13■□□□□ 0.33
CCDC50-202ENST00000392456 IMPA2O14732 288 aa17.12■□□□□ 0.33
CCDC50-202ENST00000392456 ONECUT2O95948 504 aa17.12■□□□□ 0.33
CCDC50-202ENST00000392456 CRHP06850 196 aa17.12■□□□□ 0.33
CCDC50-202ENST00000392456 THBS1P07996 1170 aa17.12■□□□□ 0.33
CCDC50-202ENST00000392456 OR8G3PP0DMU2 310 aa17.12■□□□□ 0.33
CCDC50-202ENST00000392456 GLO1Q04760 184 aa17.12■□□□□ 0.33
CCDC50-202ENST00000392456 ENTPD8Q5MY95 495 aa17.12■□□□□ 0.33
CCDC50-202ENST00000392456 OR52W1Q6IF63 320 aa17.12■□□□□ 0.33
CCDC50-202ENST00000392456 MRPL14Q6P1L8 145 aaKnown RBP17.12■□□□□ 0.33
CCDC50-202ENST00000392456 LRRC18Q8N456 261 aa17.12■□□□□ 0.33
CCDC50-202ENST00000392456 PRRC1Q96M27 445 aa17.12■□□□□ 0.33
CCDC50-202ENST00000392456 PIGQQ9BRB3 760 aa17.12■□□□□ 0.33
CCDC50-202ENST00000392456 NAA11Q9BSU3 229 aaPredicted RBP17.12■□□□□ 0.33
CCDC50-202ENST00000392456 FNDC11Q9BVV2 318 aa17.12■□□□□ 0.33
CCDC50-202ENST00000392456 CHTOPQ9Y3Y2 248 aaKnown RBP17.12■□□□□ 0.33
CCDC50-202ENST00000392456 PRAF2O60831 178 aa17.12■□□□□ 0.33
CCDC50-202ENST00000392456 ZNF35P13682 527 aa17.12■□□□□ 0.33
CCDC50-202ENST00000392456 ZNF14P17017 642 aaPredicted RBP17.12■□□□□ 0.33
CCDC50-202ENST00000392456 HTR2AP28223 471 aa17.12■□□□□ 0.33
CCDC50-202ENST00000392456 NOS3P29474 1203 aa17.12■□□□□ 0.33
CCDC50-202ENST00000392456 FGF9P31371 208 aaPredicted RBP17.12■□□□□ 0.33
CCDC50-202ENST00000392456 CCKBRP32239 447 aa17.12■□□□□ 0.33
CCDC50-202ENST00000392456 EBPQ15125 230 aaKnown RBP17.12■□□□□ 0.33
CCDC50-202ENST00000392456 DCST1Q5T197 706 aa17.12■□□□□ 0.33
CCDC50-202ENST00000392456 SIAH3Q8IW03 269 aa17.12■□□□□ 0.33
CCDC50-202ENST00000392456 BOLLQ8N9W6 283 aaKnown RBP17.12■□□□□ 0.33
CCDC50-202ENST00000392456 FAM71CQ8NEG0 241 aa17.12■□□□□ 0.33
CCDC50-202ENST00000392456 OR1N1Q8NGS0 311 aa17.12■□□□□ 0.33
CCDC50-202ENST00000392456 DIO2Q92813 273 aa17.12■□□□□ 0.33
CCDC50-202ENST00000392456 DAZLQ92904 295 aaKnown RBP17.12■□□□□ 0.33
CCDC50-202ENST00000392456 SLC46A1Q96NT5 459 aa17.12■□□□□ 0.33
CCDC50-202ENST00000392456 MCHR1Q99705 422 aa17.12■□□□□ 0.33
CCDC50-202ENST00000392456 CMKLR1Q99788 373 aa17.12■□□□□ 0.33
CCDC50-202ENST00000392456 RSRP1Q9BUV0 290 aa17.12■□□□□ 0.33
CCDC50-202ENST00000392456 C20orf85Q9H1P6 137 aa17.12■□□□□ 0.33
CCDC50-202ENST00000392456 ZNF223Q9UK11 482 aaPredicted RBP17.12■□□□□ 0.33
CCDC50-202ENST00000392456 ZAR1LA6NP61 321 aa17.11■□□□□ 0.33
CCDC50-202ENST00000392456 PRR23D1E9PI22 279 aaPredicted RBP17.11■□□□□ 0.33
CCDC50-202ENST00000392456 BLOC1S5-TXNDC5H3BN57 136 aa17.11■□□□□ 0.33
CCDC50-202ENST00000392456 LRRTM2O43300 516 aa17.11■□□□□ 0.33
CCDC50-202ENST00000392456 EIF4E2O60573 245 aaKnown RBP17.11■□□□□ 0.33
CCDC50-202ENST00000392456 ALOX12BO75342 701 aa17.11■□□□□ 0.33
CCDC50-202ENST00000392456 ENTPD6O75354 484 aa17.11■□□□□ 0.33
CCDC50-202ENST00000392456 IGFBP1P08833 259 aaPredicted RBP17.11■□□□□ 0.33
CCDC50-202ENST00000392456 PRR23D2P0DMB1 279 aaPredicted RBP17.11■□□□□ 0.33
CCDC50-202ENST00000392456 EMP2P54851 167 aa17.11■□□□□ 0.33
CCDC50-202ENST00000392456 USF2Q15853 346 aaPredicted RBP17.11■□□□□ 0.33
CCDC50-202ENST00000392456 NDUFAF6Q330K2 333 aa17.11■□□□□ 0.33
CCDC50-202ENST00000392456 NCMAPQ5T1S8 102 aa17.11■□□□□ 0.33
CCDC50-202ENST00000392456 PRSS35Q8N3Z0 413 aa17.11■□□□□ 0.33
CCDC50-202ENST00000392456 GPA33Q99795 319 aa17.11■□□□□ 0.33
CCDC50-202ENST00000392456 COL25A1Q9BXS0 654 aaPredicted RBP17.11■□□□□ 0.33
CCDC50-202ENST00000392456 FAM117AQ9C073 453 aa17.11■□□□□ 0.33
CCDC50-202ENST00000392456 ASCL3Q9NQ33 180 aa17.11■□□□□ 0.33
CCDC50-202ENST00000392456 SIRT7Q9NRC8 400 aa17.11■□□□□ 0.33
CCDC50-202ENST00000392456 KLHL28Q9NXS3 571 aa17.11■□□□□ 0.33
CCDC50-202ENST00000392456 LOXL2Q9Y4K0 774 aa17.11■□□□□ 0.33
CCDC50-202ENST00000392456 UBBP0CG47 229 aa17.11■□□□□ 0.33
CCDC50-202ENST00000392456 UBCP0CG48 685 aaKnown RBP17.11■□□□□ 0.33
CCDC50-202ENST00000392456 MAPK3P27361 379 aaPredicted RBP17.11■□□□□ 0.33
CCDC50-202ENST00000392456 PPICP45877 212 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms