RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 TMEM54Q969K7 222 aa-0.55□□□□□ -2.5
RNU6-239P-201ENST00000390990 CPNE4Q96A23 557 aaPredicted RBP-0.55□□□□□ -2.5
RNU6-239P-201ENST00000390990 OTUB2Q96DC9 234 aa-0.55□□□□□ -2.5
RNU6-239P-201ENST00000390990 ZMAT2Q96NC0 199 aaKnown RBP-0.55□□□□□ -2.5
RNU6-239P-201ENST00000390990 P2RX4Q99571 388 aa-0.55□□□□□ -2.5
RNU6-239P-201ENST00000390990 SMR3AQ99954 134 aa-0.55□□□□□ -2.5
RNU6-239P-201ENST00000390990 RARRES2Q99969 163 aa-0.55□□□□□ -2.5
RNU6-239P-201ENST00000390990 ATG10Q9H0Y0 220 aa-0.55□□□□□ -2.5
RNU6-239P-201ENST00000390990 DPH5Q9H2P9 285 aa-0.55□□□□□ -2.5
RNU6-239P-201ENST00000390990 GRPEL1Q9HAV7 217 aa-0.55□□□□□ -2.5
RNU6-239P-201ENST00000390990 CYP39A1Q9NYL5 469 aa-0.55□□□□□ -2.5
RNU6-239P-201ENST00000390990 LAMP5Q9UJQ1 280 aa-0.55□□□□□ -2.5
RNU6-239P-201ENST00000390990 APCP25054 2843 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 MPDZO75970 2070 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 TRAV19A0A0A6YYK7 116 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 FAM230AA0A1W2PPH8 454 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 GOLGA6L4A6NEF3 574 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 F5H6K3 240 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 CLDN5O00501 218 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 DNALI1O14645 258 aaPredicted RBP-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 ZNF208O43345 1280 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 PLIN3O60664 434 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 EIF1BO60739 113 aaKnown RBP-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 NAPSAO96009 420 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 IGHG2P01859 326 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 IGHMP01871 453 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 SLC2A5P22732 501 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 EIF1P41567 113 aaKnown RBP-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 SLC26A5P58743 744 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 UBE2NP61088 152 aaKnown RBP-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 NUTF2P61970 127 aaKnown RBP-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 ZNF92Q03936 586 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 KLRC3Q07444 240 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 CHRNA6Q15825 494 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 KLHL38Q2WGJ6 581 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 RAB12Q6IQ22 244 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 ZNF322Q6U7Q0 402 aaPredicted RBP-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 FAM131AQ6UXB0 335 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 MOB3BQ86TA1 216 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 CLDN19Q8N6F1 224 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 BCORP1Q8N888 145 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 HSD17B11Q8NBQ5 300 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 STXBP6Q8NFX7 210 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 OR10J6PQ8NGY7 276 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 SNX21Q969T3 373 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 NTAN1Q96AB6 310 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 C12orf42Q96LP6 360 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 TCHPQ9BT92 498 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 FAM206AQ9NX38 181 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 CGNQ9P2M7 1197 aaKnown RBP-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 TMCO1Q9UM00 188 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 STRAPQ9Y3F4 350 aaKnown RBP-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 C2orf16Q68DN1 1984 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 VWA8A3KMH1 1905 aa-0.56□□□□□ -2.5
RNU6-239P-201ENST00000390990 A0A0U1RQV5 110 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 LRP5LA4QPB2 252 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 OR5B21A6NL26 309 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 A8MXQ7 604 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 SLC22A5O76082 557 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 RAB36O95755 333 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 AP2A1O95782 977 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 PAHP00439 452 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 CTRB1P17538 263 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 PAX7P23759 505 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 MMP11P24347 488 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 PSMA2P25787 234 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 MAGEA3P43357 314 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 LGALS7P47929 136 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 FOXA1P55317 472 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 PRMT2P55345 433 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 CCDC92Q53HC0 331 aaPredicted RBP-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 THEM4Q5T1C6 240 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 TRIM40Q6P9F5 258 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 SLC35F2Q8IXU6 374 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 FAM133AQ8N9E0 248 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 OR56B1Q8NGI3 324 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 SLC2A14Q8TDB8 520 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 PYROXD1Q8WU10 500 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 OR5P3Q8WZ94 311 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 PTP4A1Q93096 173 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 SH3YL1Q96HL8 342 aaPredicted RBP-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 MS4A4EQ96PG1 132 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 SECISBP2Q96T21 854 aaKnown RBP-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 FAIM2Q9BWQ8 316 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 UFSP2Q9NUQ7 469 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 RHBDL2Q9NX52 303 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 TMED5Q9Y3A6 229 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 RGS12O14924 1447 aa-0.57□□□□□ -2.5
RNU6-239P-201ENST00000390990 COL4A2P08572 1712 aa-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 CFAP73A6NFT4 308 aa-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 ARHGAP42A6NI28 874 aa-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 SIGLEC16A6NMB1 481 aa-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 KRBOX1C9JBD0 128 aa-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 OR4F21O95013 312 aa-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 GOSR1O95249 250 aa-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 MBD3O95983 291 aa-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 CD3GP09693 182 aa-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 CCNB1P14635 433 aa-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 RAB3BP20337 219 aa-0.58□□□□□ -2.5
RNU6-239P-201ENST00000390990 IMPDH1P20839 514 aa-0.58□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms