RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 RNF13O43567 381 aa2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 RP2O75695 350 aa2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 TSPAN13O95857 204 aa2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 ACSM4P0C7M7 580 aa2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 OR56A5P0C7T3 313 aa2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 OR5H8P0DN80 308 aa2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 MUC1P15941 1255 aaPredicted RBP2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 WARSP23381 471 aaKnown RBP2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 CSNK1EP49674 416 aaKnown RBP2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 LY6EQ16553 131 aa2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 SNRNP35Q16560 246 aaKnown RBP2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 SMUG1Q53HV7 270 aa2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 XKR7Q5GH72 579 aa2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 XKR4Q5GH76 650 aa2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 METTL21CQ5VZV1 264 aa2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 PRMT9Q6P2P2 845 aa2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 Q6ZSR3 168 aa2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 CDH26Q8IXH8 852 aa2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 LGI3Q8N145 548 aa2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 RNF182Q8N6D2 247 aa2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 ZNF709Q8N972 641 aa2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 NTAN1Q96AB6 310 aa2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 RASD2Q96D21 266 aa2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 ZNF681Q96N22 645 aa2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 PLIN2Q99541 437 aa2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 NUP58Q9BVL2 599 aa2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 UXTQ9UBK9 157 aaPredicted RBP2.52□□□□□ -2.01
SNORA40.2-201ENST00000390847 IGLV1-50A0A075B6I6 118 aa2.51□□□□□ -2.01
SNORA40.2-201ENST00000390847 TMEM223A0PJW6 202 aa2.51□□□□□ -2.01
SNORA40.2-201ENST00000390847 XKRY2A2RUG3 117 aa2.51□□□□□ -2.01
SNORA40.2-201ENST00000390847 GOLGA8OA6NCC3 632 aa2.51□□□□□ -2.01
SNORA40.2-201ENST00000390847 GOLGA8NF8WBI6 632 aa2.51□□□□□ -2.01
SNORA40.2-201ENST00000390847 CLOCKO15516 846 aa2.51□□□□□ -2.01
SNORA40.2-201ENST00000390847 OR2J3O76001 311 aa2.51□□□□□ -2.01
SNORA40.2-201ENST00000390847 SNX4O95219 450 aa2.51□□□□□ -2.01
SNORA40.2-201ENST00000390847 DCKP27707 260 aa2.51□□□□□ -2.01
SNORA40.2-201ENST00000390847 CDH6P55285 790 aa2.51□□□□□ -2.01
SNORA40.2-201ENST00000390847 PON2Q15165 354 aa2.51□□□□□ -2.01
SNORA40.2-201ENST00000390847 IRF4Q15306 451 aa2.51□□□□□ -2.01
SNORA40.2-201ENST00000390847 COX19Q49B96 90 aa2.51□□□□□ -2.01
SNORA40.2-201ENST00000390847 ZNF684Q5T5D7 378 aa2.51□□□□□ -2.01
SNORA40.2-201ENST00000390847 C9orf135Q5VTT2 229 aa2.51□□□□□ -2.01
SNORA40.2-201ENST00000390847 Q5W150 140 aa2.51□□□□□ -2.01
SNORA40.2-201ENST00000390847 ZNF880Q6PDB4 577 aa2.51□□□□□ -2.01
SNORA40.2-201ENST00000390847 FAM43BQ6ZT52 329 aaPredicted RBP2.51□□□□□ -2.01
SNORA40.2-201ENST00000390847 CALHM1Q8IU99 346 aa2.51□□□□□ -2.01
SNORA40.2-201ENST00000390847 ZNF615Q8N8J6 731 aa2.51□□□□□ -2.01
SNORA40.2-201ENST00000390847 ZFP41Q8N8Y5 198 aa2.51□□□□□ -2.01
SNORA40.2-201ENST00000390847 ZNF461Q8TAF7 563 aa2.51□□□□□ -2.01
SNORA40.2-201ENST00000390847 OR10C1Q96KK4 312 aa2.51□□□□□ -2.01
SNORA40.2-201ENST00000390847 ZNF578Q96N58 590 aaPredicted RBP2.51□□□□□ -2.01
SNORA40.2-201ENST00000390847 MICU1Q9BPX6 476 aa2.51□□□□□ -2.01
SNORA40.2-201ENST00000390847 SPNS1Q9H2V7 528 aa2.51□□□□□ -2.01
SNORA40.2-201ENST00000390847 OR51M1Q9H341 326 aa2.51□□□□□ -2.01
SNORA40.2-201ENST00000390847 SAV1Q9H4B6 383 aaPredicted RBP2.51□□□□□ -2.01
SNORA40.2-201ENST00000390847 UBE2ZQ9H832 354 aaPredicted RBP2.51□□□□□ -2.01
SNORA40.2-201ENST00000390847 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 ZNF716A6NP11 495 aa2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 COLCA2A8K830 154 aa2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 UBXN8O00124 270 aa2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 SGK1O00141 431 aa2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 NUPL2O15504 423 aaKnown RBP2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 KLHL41O60662 606 aa2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 RDH16O75452 317 aa2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 RBBP9O75884 186 aa2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 ZNF735P0CB33 412 aa2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 EIF2S2P20042 333 aaKnown RBP2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 DTYMKP23919 212 aa2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 PBLDP30039 288 aaPredicted RBP2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 RRM2P31350 389 aa2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 RND2P52198 227 aa2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 VSX2P58304 361 aaPredicted RBP2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 UBE2NP61088 152 aaKnown RBP2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 SOHLH1Q5JUK2 328 aa2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 FBXW12Q6X9E4 464 aa2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 SHISA6Q6ZSJ9 500 aa2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 NTM-AS1Q6ZSK4 140 aa2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 WDR86Q86TI4 376 aa2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 METTL13Q8N6R0 699 aa2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 PRELID2Q8N945 189 aa2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 OR7G2Q8NG99 324 aa2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 OR2A1Q8NGT9 310 aa2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 COQ8AQ8NI60 647 aa2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 DNAJC1Q96KC8 554 aaKnown RBP2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 DDX19AQ9NUU7 478 aaKnown RBP2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 HRASLS2Q9NWW9 162 aa2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 PITPNC1Q9UKF7 332 aa2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 KCNE3Q9Y6H6 103 aa2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 GPATCH8Q9UKJ3 1502 aaKnown RBP2.5□□□□□ -2.01
SNORA40.2-201ENST00000390847 IGLV2-18A0A075B6J9 118 aa2.49□□□□□ -2.01
SNORA40.2-201ENST00000390847 C9JVG2 144 aa2.49□□□□□ -2.01
SNORA40.2-201ENST00000390847 IGHDP01880 384 aa2.49□□□□□ -2.01
SNORA40.2-201ENST00000390847 GGT1P19440 569 aa2.49□□□□□ -2.01
SNORA40.2-201ENST00000390847 SSTR5P35346 364 aa2.49□□□□□ -2.01
SNORA40.2-201ENST00000390847 GPX4P36969 197 aaPredicted RBP2.49□□□□□ -2.01
SNORA40.2-201ENST00000390847 SLC1A1P43005 524 aa2.49□□□□□ -2.01
SNORA40.2-201ENST00000390847 LOXL1Q08397 574 aaPredicted RBP2.49□□□□□ -2.01
SNORA40.2-201ENST00000390847 CDH17Q12864 832 aa2.49□□□□□ -2.01
SNORA40.2-201ENST00000390847 SF3A2Q15428 464 aaKnown RBP2.49□□□□□ -2.01
SNORA40.2-201ENST00000390847 OR7A5Q15622 319 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms