RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 C21orf140B9A014 251 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 XRCC2O43543 280 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 B4GALT1P15291 398 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 ZNF133P52736 654 aaPredicted RBP9.32□□□□□ -0.92
PKP4-201ENST00000389757 EMP3P54852 163 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 LCN10Q6JVE6 187 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 COMTD1Q86VU5 262 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 ANGPTL5Q86XS5 388 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 OR52H1Q8NGJ2 320 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 DCUN1D4Q92564 292 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 MSI2Q96DH6 328 aaKnown RBP9.32□□□□□ -0.92
PKP4-201ENST00000389757 GABARAPL1Q9H0R8 117 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 NOX3Q9HBY0 568 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 CEPT1Q9Y6K0 416 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 TRIP12Q14669 1992 aaPredicted RBP9.32□□□□□ -0.92
PKP4-201ENST00000389757 TRDV1A0A1B0GX56 115 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 GPR137BO60478 399 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 HPP00738 406 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 SHBQ15464 509 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 ANKRD16Q6P6B7 361 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 C1orf87Q8N0U7 546 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 DMBX1Q8NFW5 382 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 OR51A2Q8NGJ7 313 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 OR2T35Q8NGX2 323 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 GNRHR2Q96P88 292 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 PDCD1LG2Q9BQ51 273 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 CPNE5Q9HCH3 593 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 A0A087WUJ7 227 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 TMEM129A0AVI4 362 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 CTDSP2O14595 271 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 SLC2A10O95528 541 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 IGFBP1P08833 259 aaPredicted RBP9.32□□□□□ -0.92
PKP4-201ENST00000389757 FAM157BP0CG42 384 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 EIF2S3P41091 472 aaKnown RBP9.32□□□□□ -0.92
PKP4-201ENST00000389757 CAMLGP49069 296 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 SPCS2Q15005 226 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 PRICKLE4Q2TBC4 344 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 LPCAT3Q6P1A2 487 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 TMEM81Q6P7N7 255 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 USP51Q70EK9 711 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 TRILQ7L0X0 811 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 CLDN22Q8N7P3 220 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 TMEM185AQ8NFB2 350 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 APOBEC4Q8WW27 367 aaKnown RBP9.32□□□□□ -0.92
PKP4-201ENST00000389757 SNX18Q96RF0 628 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 ZNF71Q9NQZ8 489 aaPredicted RBP9.32□□□□□ -0.92
PKP4-201ENST00000389757 UBQLN2Q9UHD9 624 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 CLEC2DQ9UHP7 191 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 ATAD5Q96QE3 1844 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 LOC100289279A0A1B0GTE1 492 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 ZC3H12DA2A288 527 aaKnown RBP9.32□□□□□ -0.92
PKP4-201ENST00000389757 OR6C6A6NF89 314 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 FXYD1O00168 92 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 SOD1P00441 154 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 TFP02787 698 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 PRR35P0CG20 571 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 SRMP19623 302 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 GIFP27352 417 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 PTGS2P35354 604 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 STARD6P59095 220 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 ZNF808Q8N4W9 903 aaPredicted RBP9.32□□□□□ -0.92
PKP4-201ENST00000389757 OR51D1Q8NGF3 324 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 SECTM1Q8WVN6 248 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 UBE2FQ969M7 185 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 BCO1Q9HAY6 547 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 SPACA1Q9HBV2 294 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 HAO2Q9NYQ3 351 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 PCOLCE2Q9UKZ9 415 aa9.32□□□□□ -0.92
PKP4-201ENST00000389757 ARRDC5A6NEK1 342 aa9.31□□□□□ -0.92
PKP4-201ENST00000389757 PIPP12273 146 aaPredicted RBP9.31□□□□□ -0.92
PKP4-201ENST00000389757 ZNF117Q03924 483 aa9.31□□□□□ -0.92
PKP4-201ENST00000389757 ZNF92Q03936 586 aa9.31□□□□□ -0.92
PKP4-201ENST00000389757 CEACAM16Q2WEN9 425 aa9.31□□□□□ -0.92
PKP4-201ENST00000389757 C12orf45Q8N5I9 185 aaPredicted RBP9.31□□□□□ -0.92
PKP4-201ENST00000389757 GPR119Q8TDV5 335 aa9.31□□□□□ -0.92
PKP4-201ENST00000389757 SGK3Q96BR1 496 aa9.31□□□□□ -0.92
PKP4-201ENST00000389757 ABHD6Q9BV23 337 aa9.31□□□□□ -0.92
PKP4-201ENST00000389757 ZNF225Q9UK10 706 aa9.31□□□□□ -0.92
PKP4-201ENST00000389757 NEU3Q9UQ49 428 aa9.31□□□□□ -0.92
PKP4-201ENST00000389757 CEP290O15078 2479 aa9.31□□□□□ -0.92
PKP4-201ENST00000389757 IGHV5-10-1A0A0J9YXX1 117 aa9.31□□□□□ -0.92
PKP4-201ENST00000389757 SERTM1A2A2V5 107 aa9.31□□□□□ -0.92
PKP4-201ENST00000389757 I3L521 148 aa9.31□□□□□ -0.92
PKP4-201ENST00000389757 RNPS1Q15287 305 aaKnown RBP9.31□□□□□ -0.92
PKP4-201ENST00000389757 ZIC1Q15915 447 aa9.31□□□□□ -0.92
PKP4-201ENST00000389757 STPG1Q5TH74 334 aa9.31□□□□□ -0.92
PKP4-201ENST00000389757 HAGHLQ6PII5 290 aaPredicted RBP9.31□□□□□ -0.92
PKP4-201ENST00000389757 APOOLQ6UXV4 268 aa9.31□□□□□ -0.92
PKP4-201ENST00000389757 RNF165Q6ZSG1 346 aa9.31□□□□□ -0.92
PKP4-201ENST00000389757 UPRTQ96BW1 309 aa9.31□□□□□ -0.92
PKP4-201ENST00000389757 ALKBH3Q96Q83 286 aaPredicted RBP9.31□□□□□ -0.92
PKP4-201ENST00000389757 GABARAPL3Q9BY60 117 aa9.31□□□□□ -0.92
PKP4-201ENST00000389757 SLC25A19Q9HC21 320 aa9.31□□□□□ -0.92
PKP4-201ENST00000389757 ZAR1LA6NP61 321 aa9.31□□□□□ -0.92
PKP4-201ENST00000389757 SLC14A1Q13336 389 aa9.31□□□□□ -0.92
PKP4-201ENST00000389757 AGERQ15109 404 aa9.31□□□□□ -0.92
PKP4-201ENST00000389757 EGFL6Q8IUX8 553 aa9.31□□□□□ -0.92
PKP4-201ENST00000389757 ZNF679Q8IYX0 411 aa9.31□□□□□ -0.92
PKP4-201ENST00000389757 OR4C3Q8NH37 302 aa9.31□□□□□ -0.92
PKP4-201ENST00000389757 OR52N5Q8NH56 324 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms