RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 CDK2AP1O14519 115 aa11.12□□□□□ -0.63
CIITA-202ENST00000381835 MT-ND5P03915 603 aa11.12□□□□□ -0.63
CIITA-202ENST00000381835 RAF1P04049 648 aa11.12□□□□□ -0.63
CIITA-202ENST00000381835 TPOP07202 933 aa11.12□□□□□ -0.63
CIITA-202ENST00000381835 CXCL3P19876 107 aa11.12□□□□□ -0.63
CIITA-202ENST00000381835 GIFP27352 417 aa11.12□□□□□ -0.63
CIITA-202ENST00000381835 MEOX1P50221 254 aa11.12□□□□□ -0.63
CIITA-202ENST00000381835 CTXN1P60606 82 aa11.12□□□□□ -0.63
CIITA-202ENST00000381835 ERVK-25P63136 954 aa11.12□□□□□ -0.63
CIITA-202ENST00000381835 CTAG1AP78358 180 aa11.12□□□□□ -0.63
CIITA-202ENST00000381835 PLGLB1Q02325 96 aa11.12□□□□□ -0.63
CIITA-202ENST00000381835 DBPQ10586 325 aaPredicted RBP11.12□□□□□ -0.63
CIITA-202ENST00000381835 SLC36A2Q495M3 483 aa11.12□□□□□ -0.63
CIITA-202ENST00000381835 DPY19L2P2Q6ZN68 376 aa11.12□□□□□ -0.63
CIITA-202ENST00000381835 IDO2Q6ZQW0 420 aa11.12□□□□□ -0.63
CIITA-202ENST00000381835 MFSD8Q8NHS3 518 aa11.12□□□□□ -0.63
CIITA-202ENST00000381835 ABHD4Q8TB40 342 aa11.12□□□□□ -0.63
CIITA-202ENST00000381835 SLC25A43Q8WUT9 341 aaPredicted RBP11.12□□□□□ -0.63
CIITA-202ENST00000381835 DACT3Q96B18 629 aaPredicted RBP11.12□□□□□ -0.63
CIITA-202ENST00000381835 OR2M2Q96R28 347 aa11.12□□□□□ -0.63
CIITA-202ENST00000381835 POTEKPQ9BYX7 375 aa11.12□□□□□ -0.63
CIITA-202ENST00000381835 TTTY12Q9BZ98 90 aa11.12□□□□□ -0.63
CIITA-202ENST00000381835 TAS2R5Q9NYW4 299 aa11.12□□□□□ -0.63
CIITA-202ENST00000381835 KCNN3Q9UGI6 736 aa11.12□□□□□ -0.63
CIITA-202ENST00000381835 SPEF1Q9Y4P9 236 aa11.12□□□□□ -0.63
CIITA-202ENST00000381835 CD3GP09693 182 aa11.11□□□□□ -0.63
CIITA-202ENST00000381835 TRAM1Q15629 374 aa11.11□□□□□ -0.63
CIITA-202ENST00000381835 SGCBQ16585 318 aa11.11□□□□□ -0.63
CIITA-202ENST00000381835 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.11□□□□□ -0.63
CIITA-202ENST00000381835 KDM8Q8N371 416 aa11.11□□□□□ -0.63
CIITA-202ENST00000381835 OR11H4Q8NGC9 324 aa11.11□□□□□ -0.63
CIITA-202ENST00000381835 FAM122AQ96E09 287 aa11.11□□□□□ -0.63
CIITA-202ENST00000381835 HCAR1Q9BXC0 346 aa11.11□□□□□ -0.63
CIITA-202ENST00000381835 CACNG6Q9BXT2 260 aa11.11□□□□□ -0.63
CIITA-202ENST00000381835 FN3KQ9H479 309 aa11.11□□□□□ -0.63
CIITA-202ENST00000381835 NRIP3Q9NQ35 241 aa11.11□□□□□ -0.63
CIITA-202ENST00000381835 PTTG3PQ9NZH4 202 aa11.11□□□□□ -0.63
CIITA-202ENST00000381835 EIF3KQ9UBQ5 218 aaKnown RBP11.11□□□□□ -0.63
CIITA-202ENST00000381835 B4GALT7Q9UBV7 327 aa11.11□□□□□ -0.63
CIITA-202ENST00000381835 BAIAP2Q9UQB8 552 aa11.11□□□□□ -0.63
CIITA-202ENST00000381835 MRPS7Q9Y2R9 242 aaKnown RBP11.11□□□□□ -0.63
CIITA-202ENST00000381835 PTPRQQ9UMZ3 2332 aa11.11□□□□□ -0.63
CIITA-202ENST00000381835 CACNA1GO43497 2377 aa11.11□□□□□ -0.63
CIITA-202ENST00000381835 LIPT2A6NK58 231 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 B8ZZF3 427 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 J3QLW9 94 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 RRP8O43159 456 aaKnown RBP11.1□□□□□ -0.63
CIITA-202ENST00000381835 PLPP2O43688 288 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 CEACAM4O75871 244 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 OR6A2O95222 327 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 PDGFAP04085 211 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 MRPL3P09001 348 aaKnown RBP11.1□□□□□ -0.63
CIITA-202ENST00000381835 HIST1H1CP16403 213 aaKnown RBP11.1□□□□□ -0.63
CIITA-202ENST00000381835 ZNF17P17021 662 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 ZNF19P17023 458 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 CD53P19397 219 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 SLC25A35Q3KQZ1 300 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 ARHGAP11AQ6P4F7 1023 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 SIAH3Q8IW03 269 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 SLC43A2Q8N370 569 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 CYB561A3Q8NBI2 242 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 TMEM178AQ8NBL3 297 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 OR4K13Q8NH42 304 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 MARVELD3Q96A59 401 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 SFXN2Q96NB2 322 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 ZFP3Q96NJ6 502 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 OR51V1Q9H2C8 321 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 ZNF703Q9H7S9 590 aaPredicted RBP11.1□□□□□ -0.63
CIITA-202ENST00000381835 CMC2Q9NRP2 79 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 A0A0G2JK05 382 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 RIIAD1A6NNX1 92 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 PRR23D1E9PI22 279 aaPredicted RBP11.1□□□□□ -0.63
CIITA-202ENST00000381835 AKR7A3O95154 331 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 PLGP00747 810 aaPredicted RBP11.1□□□□□ -0.63
CIITA-202ENST00000381835 CD14P08571 375 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 CELA3AP09093 270 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 PRR23D2P0DMB1 279 aaPredicted RBP11.1□□□□□ -0.63
CIITA-202ENST00000381835 RAB3BP20337 219 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 ACVR1BP36896 505 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 MAGEA5P43359 124 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 B3GALT5-AS1P59052 145 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 PITPNAQ00169 270 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 MFSD13AQ14CX5 517 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 IGFL2Q6UWQ7 119 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 LRRC75AQ8NAA5 344 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 SDR9C7Q8NEX9 313 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 OR52E2Q8NGJ4 325 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 OR6S1Q8NH40 331 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 LRRC20Q8TCA0 184 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 RASD2Q96D21 266 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 C4orf36Q96KX1 117 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 Q96M85 177 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 DPCDQ9BVM2 203 aaPredicted RBP11.1□□□□□ -0.63
CIITA-202ENST00000381835 CLEC4MQ9H2X3 399 aaPredicted RBP11.1□□□□□ -0.63
CIITA-202ENST00000381835 INPP5EQ9NRR6 644 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 COPZ2Q9P299 210 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 SSUH2Q9Y2M2 353 aa11.1□□□□□ -0.63
CIITA-202ENST00000381835 SULT2B1O00204 365 aa11.09□□□□□ -0.63
CIITA-202ENST00000381835 PLPP3O14495 311 aa11.09□□□□□ -0.63
CIITA-202ENST00000381835 ADRB1P08588 477 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms