RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 ESRRGP62508 458 aa14.03□□□□□ -0.16
SNRPB-201ENST00000381342 NAAAQ02083 359 aa14.03□□□□□ -0.16
SNRPB-201ENST00000381342 PTGES3Q15185 160 aaKnown RBP14.03□□□□□ -0.16
SNRPB-201ENST00000381342 MEP1BQ16820 701 aa14.03□□□□□ -0.16
SNRPB-201ENST00000381342 C3orf36Q3SXR2 165 aa14.03□□□□□ -0.16
SNRPB-201ENST00000381342 B3GLCTQ6Y288 498 aa14.03□□□□□ -0.16
SNRPB-201ENST00000381342 DPPA2Q7Z7J5 298 aa14.03□□□□□ -0.16
SNRPB-201ENST00000381342 ZBTB46Q86UZ6 589 aa14.03□□□□□ -0.16
SNRPB-201ENST00000381342 ZNF584Q8IVC4 421 aa14.03□□□□□ -0.16
SNRPB-201ENST00000381342 CBR4Q8N4T8 237 aa14.03□□□□□ -0.16
SNRPB-201ENST00000381342 PROKR2Q8NFJ6 384 aa14.03□□□□□ -0.16
SNRPB-201ENST00000381342 OR51L1Q8NGJ5 315 aa14.03□□□□□ -0.16
SNRPB-201ENST00000381342 TMEM171Q8WVE6 324 aa14.03□□□□□ -0.16
SNRPB-201ENST00000381342 ZNRF4Q8WWF5 429 aa14.03□□□□□ -0.16
SNRPB-201ENST00000381342 C11orf40Q8WZ69 217 aa14.03□□□□□ -0.16
SNRPB-201ENST00000381342 AKAP1Q92667 903 aaKnown RBP eCLIP14.03□□□□□ -0.163e-10■■□□□ 14.2
SNRPB-201ENST00000381342 OTULINQ96BN8 352 aa14.03□□□□□ -0.16
SNRPB-201ENST00000381342 RADILQ96JH8 1075 aa14.03□□□□□ -0.16
SNRPB-201ENST00000381342 KCNS3Q9BQ31 491 aa14.03□□□□□ -0.16
SNRPB-201ENST00000381342 TMUB1Q9BVT8 246 aa14.03□□□□□ -0.16
SNRPB-201ENST00000381342 HCAR1Q9BXC0 346 aa14.03□□□□□ -0.16
SNRPB-201ENST00000381342 NMNAT2Q9BZQ4 307 aa14.03□□□□□ -0.16
SNRPB-201ENST00000381342 KCNN2Q9H2S1 579 aa14.03□□□□□ -0.16
SNRPB-201ENST00000381342 RIBC2Q9H4K1 309 aa14.03□□□□□ -0.16
SNRPB-201ENST00000381342 F8P00451 2351 aa14.02□□□□□ -0.16
SNRPB-201ENST00000381342 PRRC2AP48634 2157 aaKnown RBP14.02□□□□□ -0.16
SNRPB-201ENST00000381342 H0YHG0 523 aa14.02□□□□□ -0.17
SNRPB-201ENST00000381342 M0R129 80 aa14.02□□□□□ -0.17
SNRPB-201ENST00000381342 HS3ST1O14792 307 aa14.02□□□□□ -0.17
SNRPB-201ENST00000381342 SPI1P17947 270 aa14.02□□□□□ -0.17
SNRPB-201ENST00000381342 ADAM8P78325 824 aa14.02□□□□□ -0.17
SNRPB-201ENST00000381342 ELF3P78545 371 aaPredicted RBP14.02□□□□□ -0.17
SNRPB-201ENST00000381342 GLO1Q04760 184 aa14.02□□□□□ -0.17
SNRPB-201ENST00000381342 ZNF672Q499Z4 452 aaPredicted RBP14.02□□□□□ -0.17
SNRPB-201ENST00000381342 PABPC1L2AQ5JQF8 200 aa14.02□□□□□ -0.17
SNRPB-201ENST00000381342 LYPD4Q6UWN0 246 aa14.02□□□□□ -0.17
SNRPB-201ENST00000381342 LRRC75A-AS1Q8N1F1 130 aa14.02□□□□□ -0.17
SNRPB-201ENST00000381342 SLC26A10Q8NG04 563 aa14.02□□□□□ -0.17
SNRPB-201ENST00000381342 OR2T4Q8NH00 348 aa14.02□□□□□ -0.17
SNRPB-201ENST00000381342 AKR7LQ8NHP1 331 aa14.02□□□□□ -0.17
SNRPB-201ENST00000381342 C9orf16Q9BUW7 83 aa14.02□□□□□ -0.17
SNRPB-201ENST00000381342 GABARAPL3Q9BY60 117 aa14.02□□□□□ -0.17
SNRPB-201ENST00000381342 CXorf56Q9H5V9 222 aa14.02□□□□□ -0.17
SNRPB-201ENST00000381342 USE1Q9NZ43 259 aa14.02□□□□□ -0.17
SNRPB-201ENST00000381342 POU2F3Q9UKI9 436 aa14.02□□□□□ -0.17
SNRPB-201ENST00000381342 POLR1DQ9Y2S0 133 aa14.02□□□□□ -0.17
SNRPB-201ENST00000381342 ROS1P08922 2347 aa14.02□□□□□ -0.17
SNRPB-201ENST00000381342 IGHV2OR16-5A0A0B4J2B6 119 aa14.01□□□□□ -0.17
SNRPB-201ENST00000381342 ZAR1LA6NP61 321 aa14.01□□□□□ -0.17
SNRPB-201ENST00000381342 C12orf71A8MTZ7 269 aa14.01□□□□□ -0.17
SNRPB-201ENST00000381342 TMCC2O75069 709 aa14.01□□□□□ -0.17
SNRPB-201ENST00000381342 HLA-DQA2P01906 255 aa14.01□□□□□ -0.17
SNRPB-201ENST00000381342 CRYAAP02489 173 aa14.01□□□□□ -0.17
SNRPB-201ENST00000381342 TFP02787 698 aa14.01□□□□□ -0.17
SNRPB-201ENST00000381342 HMGN1P05114 100 aa14.01□□□□□ -0.17
SNRPB-201ENST00000381342 ANPEPP15144 967 aa14.01□□□□□ -0.17
SNRPB-201ENST00000381342 POLR2IP36954 125 aaKnown RBP14.01□□□□□ -0.17
SNRPB-201ENST00000381342 ALDH3A2P51648 485 aa14.01□□□□□ -0.17
SNRPB-201ENST00000381342 SLC25A1P53007 311 aa14.01□□□□□ -0.17
SNRPB-201ENST00000381342 RIPPLY3P57055 190 aa14.01□□□□□ -0.17
SNRPB-201ENST00000381342 HSF2Q03933 536 aa14.01□□□□□ -0.17
SNRPB-201ENST00000381342 KCNMB1Q16558 191 aa14.01□□□□□ -0.17
SNRPB-201ENST00000381342 SLX4IPQ5VYV7 408 aa14.01□□□□□ -0.17
SNRPB-201ENST00000381342 EME1Q96AY2 570 aa14.01□□□□□ -0.17
SNRPB-201ENST00000381342 PLEKHA8Q96JA3 519 aa14.01□□□□□ -0.17
SNRPB-201ENST00000381342 OR2H1Q9GZK4 316 aa14.01□□□□□ -0.17
SNRPB-201ENST00000381342 WNT5BQ9H1J7 359 aa14.01□□□□□ -0.17
SNRPB-201ENST00000381342 HINT3Q9NQE9 182 aaKnown RBP14.01□□□□□ -0.17
SNRPB-201ENST00000381342 TVP23BQ9NYZ1 205 aa14.01□□□□□ -0.17
SNRPB-201ENST00000381342 ASH2LQ9UBL3 628 aa14.01□□□□□ -0.17
SNRPB-201ENST00000381342 ENOPH1Q9UHY7 261 aa14.01□□□□□ -0.17
SNRPB-201ENST00000381342 FBXL3Q9UKT7 428 aa14.01□□□□□ -0.17
SNRPB-201ENST00000381342 ATP23Q9Y6H3 246 aa14.01□□□□□ -0.17
SNRPB-201ENST00000381342 PLCE1Q9P212 2302 aa14.01□□□□□ -0.17
SNRPB-201ENST00000381342 MED13LQ71F56 2210 aa14□□□□□ -0.17
SNRPB-201ENST00000381342 TVP23AA6NH52 213 aa14□□□□□ -0.17
SNRPB-201ENST00000381342 PRR23D1E9PI22 279 aaPredicted RBP14□□□□□ -0.17
SNRPB-201ENST00000381342 SERPINA5P05154 406 aa14□□□□□ -0.17
SNRPB-201ENST00000381342 PRR23D2P0DMB1 279 aaPredicted RBP14□□□□□ -0.17
SNRPB-201ENST00000381342 CCL2P13500 99 aa14□□□□□ -0.17
SNRPB-201ENST00000381342 FOSL1P15407 271 aa14□□□□□ -0.17
SNRPB-201ENST00000381342 PAICSP22234 425 aaKnown RBP14□□□□□ -0.17
SNRPB-201ENST00000381342 APEX1P27695 318 aaKnown RBP14□□□□□ -0.17
SNRPB-201ENST00000381342 PCBD1P61457 104 aa14□□□□□ -0.17
SNRPB-201ENST00000381342 LSM6P62312 80 aaKnown RBP14□□□□□ -0.17
SNRPB-201ENST00000381342 PSG4Q00888 419 aa14□□□□□ -0.17
SNRPB-201ENST00000381342 TEKQ02763 1124 aa14□□□□□ -0.17
SNRPB-201ENST00000381342 AQP6Q13520 282 aa14□□□□□ -0.17
SNRPB-201ENST00000381342 C12orf73Q69YU5 71 aa14□□□□□ -0.17
SNRPB-201ENST00000381342 ZNF774Q6NX45 483 aa14□□□□□ -0.17
SNRPB-201ENST00000381342 PLBD1Q6P4A8 553 aa14□□□□□ -0.17
SNRPB-201ENST00000381342 DEPDC4Q8N2C3 294 aa14□□□□□ -0.17
SNRPB-201ENST00000381342 ZNF611Q8N823 705 aa14□□□□□ -0.17
SNRPB-201ENST00000381342 CPEB3Q8NE35 698 aaKnown RBP14□□□□□ -0.17
SNRPB-201ENST00000381342 SLC30A7Q8NEW0 376 aa14□□□□□ -0.17
SNRPB-201ENST00000381342 BBS1Q8NFJ9 593 aa14□□□□□ -0.17
SNRPB-201ENST00000381342 OR10H5Q8NGA6 315 aa14□□□□□ -0.17
SNRPB-201ENST00000381342 OR6K6Q8NGW6 343 aa14□□□□□ -0.17
SNRPB-201ENST00000381342 FBXW5Q969U6 566 aa14□□□□□ -0.17
SNRPB-201ENST00000381342 SLC29A1Q99808 456 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms