RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 TRAV14DV4A0A0A6YYC5 116 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 LMO7DNF2Z398 122 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 ALOX12BO75342 701 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 AKAIN1P0CW23 69 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 PRSS3P35030 304 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 CFHR1Q03591 330 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 LRRC37A5PQ49AS3 106 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 NDUFAF7Q7L592 441 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 OVCH2Q7RTZ1 564 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 WDR13Q9H1Z4 485 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 GPR27Q9NS67 375 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 MED11Q9P086 117 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 FGF2P09038 288 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 CTRB1P17538 263 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 CSF2RBP32927 897 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 GABRA4P48169 554 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 EFNA3P52797 238 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 SMAD4Q13485 552 aaKnown RBP14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 NR0B2Q15466 257 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 BEX5Q5H9J7 111 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 LY6G6FQ5SQ64 297 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 EEF1A1P5Q5VTE0 462 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 CTRB2Q6GPI1 263 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 ZNF627Q7L945 461 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 BOLLQ8N9W6 283 aaKnown RBP14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 OR52H1Q8NGJ2 320 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 OR51A2Q8NGJ7 313 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 DCBLD2Q96PD2 775 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 B3GNT4Q9C0J1 378 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 CTSFQ9UBX1 484 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 LOC100509620A0A075B734 347 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 CCSO14618 274 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 ICAM2P13598 275 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 PSMD4P55036 377 aaKnown RBP14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 SLC37A1P57057 533 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 RAB11BQ15907 218 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 KDM8Q8N371 416 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 OR1J4Q8NGS1 313 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 LANCL2Q9NS86 450 aa14.63□□□□□ -0.07
NKX3-1-201ENST00000380871 LRP4O75096 1905 aa14.62□□□□□ -0.07
NKX3-1-201ENST00000380871 ZNF264O43296 627 aa14.62□□□□□ -0.07
NKX3-1-201ENST00000380871 PIAS2O75928 621 aa14.62□□□□□ -0.07
NKX3-1-201ENST00000380871 SPARCP09486 303 aa14.62□□□□□ -0.07
NKX3-1-201ENST00000380871 PNMTP11086 282 aa14.62□□□□□ -0.07
NKX3-1-201ENST00000380871 RORAP35398 523 aa14.62□□□□□ -0.07
NKX3-1-201ENST00000380871 ZNF273Q14593 569 aa14.62□□□□□ -0.07
NKX3-1-201ENST00000380871 GABRG1Q8N1C3 465 aa14.62□□□□□ -0.07
NKX3-1-201ENST00000380871 OR1J2Q8NGS2 313 aa14.62□□□□□ -0.07
NKX3-1-201ENST00000380871 OTOSQ8NHW6 89 aa14.62□□□□□ -0.07
NKX3-1-201ENST00000380871 SLC25A28Q96A46 364 aa14.62□□□□□ -0.07
NKX3-1-201ENST00000380871 APOC3P02656 99 aa14.62□□□□□ -0.07
NKX3-1-201ENST00000380871 IFI6P09912 130 aa14.62□□□□□ -0.07
NKX3-1-201ENST00000380871 FBLP22087 321 aaKnown RBP14.62□□□□□ -0.07
NKX3-1-201ENST00000380871 SERTAD2Q14140 314 aa14.62□□□□□ -0.07
NKX3-1-201ENST00000380871 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.62□□□□□ -0.07
NKX3-1-201ENST00000380871 MOGAT2Q3SYC2 334 aa14.62□□□□□ -0.07
NKX3-1-201ENST00000380871 CDH26Q8IXH8 852 aa14.62□□□□□ -0.07
NKX3-1-201ENST00000380871 OR5M9Q8NGP3 310 aa14.62□□□□□ -0.07
NKX3-1-201ENST00000380871 TBL1XR1Q9BZK7 514 aa14.62□□□□□ -0.07
NKX3-1-201ENST00000380871 TAS2R4Q9NYW5 299 aa14.62□□□□□ -0.07
NKX3-1-201ENST00000380871 B9D1Q9UPM9 204 aa14.62□□□□□ -0.07
NKX3-1-201ENST00000380871 FARSAQ9Y285 508 aaKnown RBP14.62□□□□□ -0.07
NKX3-1-201ENST00000380871 IGHV1OR21-1A0A087WYE8 117 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 LILRA5A6NI73 299 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 MPZL1O95297 269 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 RENP00797 406 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 MPGP29372 298 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 NXPH1P58417 271 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 BAMBIQ13145 260 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 ATXN7L3Q14CW9 347 aaPredicted RBP14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 GMEB2Q9UKD1 530 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 DCDC2BA2VCK2 349 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 BET1O15155 118 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 OR4E1P0C645 316 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 ZNF28P17035 718 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 HSD11B2P80365 405 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 PLCXD2Q0VAA5 305 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 GLYATL3Q5SZD4 288 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 FAM69BQ5VUD6 431 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 PTCRAQ6ISU1 281 aaPredicted RBP14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 PDZD9Q8IXQ8 264 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 SLC25A45Q8N413 288 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 OR4S1Q8NGB4 309 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 C15orf40Q8WUR7 153 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 MRPS24Q96EL2 167 aaKnown RBP14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 ZNF304Q9HCX3 659 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 FGF21Q9NSA1 209 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 LOC100289279A0A1B0GTE1 492 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 KCNAB3O43448 404 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 LMX1BO60663 402 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 TSPAN9O75954 239 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 TXNDC12O95881 172 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 APEHP13798 732 aaKnown RBP14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 NAT1P18440 290 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 IGLV3-21P80748 117 aaPredicted RBP14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 EGR3Q06889 387 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 LIN54Q6MZP7 749 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 TFAP2EQ6VUC0 442 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 SEH1LQ96EE3 360 aa14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 MNTQ99583 582 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms