RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 YIPF5Q969M3 257 aa12.82□□□□□ -0.36
CLCN4-201ENST00000380829 SMIM19Q96E16 107 aa12.82□□□□□ -0.36
CLCN4-201ENST00000380829 LRRC46Q96FV0 321 aa12.82□□□□□ -0.36
CLCN4-201ENST00000380829 ZNF587Q96SQ5 575 aaPredicted RBP12.82□□□□□ -0.36
CLCN4-201ENST00000380829 ARRDC1-AS1Q9H2J1 176 aa12.82□□□□□ -0.36
CLCN4-201ENST00000380829 CA10Q9NS85 328 aa12.82□□□□□ -0.36
CLCN4-201ENST00000380829 TRBV2A0A0J9YWF9 115 aa12.82□□□□□ -0.36
CLCN4-201ENST00000380829 AIPO00170 330 aa12.82□□□□□ -0.36
CLCN4-201ENST00000380829 SC5DO75845 299 aa12.82□□□□□ -0.36
CLCN4-201ENST00000380829 AHSA1O95433 338 aa12.82□□□□□ -0.36
CLCN4-201ENST00000380829 RENP00797 406 aa12.82□□□□□ -0.36
CLCN4-201ENST00000380829 TRA2AQ13595 282 aaKnown RBP eCLIP12.82□□□□□ -0.36
CLCN4-201ENST00000380829 TRAM1Q15629 374 aa12.82□□□□□ -0.36
CLCN4-201ENST00000380829 INPP5JQ15735 1006 aaPredicted RBP12.82□□□□□ -0.36
CLCN4-201ENST00000380829 ACKR1Q16570 336 aa12.82□□□□□ -0.36
CLCN4-201ENST00000380829 CCDC157Q569K6 752 aa12.82□□□□□ -0.36
CLCN4-201ENST00000380829 FGD2Q7Z6J4 655 aa12.82□□□□□ -0.36
CLCN4-201ENST00000380829 ZNF454Q8N9F8 522 aa12.82□□□□□ -0.36
CLCN4-201ENST00000380829 ADAMTS14Q8WXS8 1223 aa12.82□□□□□ -0.36
CLCN4-201ENST00000380829 MRPS24Q96EL2 167 aaKnown RBP12.82□□□□□ -0.36
CLCN4-201ENST00000380829 ARL5BQ96KC2 179 aa12.82□□□□□ -0.36
CLCN4-201ENST00000380829 FOXN4Q96NZ1 517 aa12.82□□□□□ -0.36
CLCN4-201ENST00000380829 DEFB126Q9BYW3 111 aa12.82□□□□□ -0.36
CLCN4-201ENST00000380829 COA4Q9NYJ1 87 aa12.82□□□□□ -0.36
CLCN4-201ENST00000380829 MRPL15Q9P015 296 aaKnown RBP12.82□□□□□ -0.36
CLCN4-201ENST00000380829 PTRH2Q9Y3E5 179 aaKnown RBP12.82□□□□□ -0.36
CLCN4-201ENST00000380829 NPTNQ9Y639 398 aa12.82□□□□□ -0.36
CLCN4-201ENST00000380829 FREM2Q5SZK8 3169 aa12.82□□□□□ -0.36
CLCN4-201ENST00000380829 OGG1O15527 345 aa12.81□□□□□ -0.36
CLCN4-201ENST00000380829 UMODP07911 640 aa12.81□□□□□ -0.36
CLCN4-201ENST00000380829 RBMS1P29558 406 aaKnown RBP12.81□□□□□ -0.36
CLCN4-201ENST00000380829 CCKBRP32239 447 aa12.81□□□□□ -0.36
CLCN4-201ENST00000380829 MPLP40238 635 aa12.81□□□□□ -0.36
CLCN4-201ENST00000380829 CAPZA2P47755 286 aa12.81□□□□□ -0.36
CLCN4-201ENST00000380829 FOXF1Q12946 379 aa12.81□□□□□ -0.36
CLCN4-201ENST00000380829 PCOLCEQ15113 449 aa12.81□□□□□ -0.36
CLCN4-201ENST00000380829 ESPNLQ6ZVH7 1005 aa12.81□□□□□ -0.36
CLCN4-201ENST00000380829 SLC16A9Q7RTY1 509 aa12.81□□□□□ -0.36
CLCN4-201ENST00000380829 OR1S1Q8NH92 325 aa12.81□□□□□ -0.36
CLCN4-201ENST00000380829 ZFP3Q96NJ6 502 aa12.81□□□□□ -0.36
CLCN4-201ENST00000380829 C20orf85Q9H1P6 137 aa12.81□□□□□ -0.36
CLCN4-201ENST00000380829 METTL7AQ9H8H3 244 aa12.81□□□□□ -0.36
CLCN4-201ENST00000380829 WDR76Q9H967 626 aa12.81□□□□□ -0.36
CLCN4-201ENST00000380829 WDR54Q9H977 334 aa12.81□□□□□ -0.36
CLCN4-201ENST00000380829 PPP4R1LQ9P1A2 415 aa12.81□□□□□ -0.36
CLCN4-201ENST00000380829 MOKQ9UQ07 419 aa12.81□□□□□ -0.36
CLCN4-201ENST00000380829 RASD1Q9Y272 281 aa12.81□□□□□ -0.36
CLCN4-201ENST00000380829 A0A087WV48 116 aa12.81□□□□□ -0.36
CLCN4-201ENST00000380829 TRAV20A0A0B4J274 112 aa12.81□□□□□ -0.36
CLCN4-201ENST00000380829 XKRYO14609 159 aa12.81□□□□□ -0.36
CLCN4-201ENST00000380829 RPP14O95059 124 aaKnown RBP12.81□□□□□ -0.36
CLCN4-201ENST00000380829 OR6A2O95222 327 aa12.81□□□□□ -0.36
CLCN4-201ENST00000380829 PXKQ7Z7A4 578 aa12.81□□□□□ -0.36
CLCN4-201ENST00000380829 SYT9Q86SS6 491 aa12.81□□□□□ -0.36
CLCN4-201ENST00000380829 RASL10BQ96S79 203 aa12.81□□□□□ -0.36
CLCN4-201ENST00000380829 UBL7Q96S82 380 aaPredicted RBP12.81□□□□□ -0.36
CLCN4-201ENST00000380829 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 PLPP3O14495 311 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 ABCD4O14678 606 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 DXOO77932 396 aaKnown RBP12.8□□□□□ -0.36
CLCN4-201ENST00000380829 AKR7A3O95154 331 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 ADRB1P08588 477 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 OR8G3PP0DMU2 310 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 HLA-DOBP13765 273 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 PTGDSP41222 190 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 MC2RQ01718 297 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 EEF1A1P5Q5VTE0 462 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 RPL22L1Q6P5R6 122 aaKnown RBP12.8□□□□□ -0.36
CLCN4-201ENST00000380829 ZNF600Q6ZNG1 722 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 OR6N2Q8NGY6 317 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 STK35Q8TDR2 534 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 RHBDD1Q8TEB9 315 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 ST8SIA1Q92185 356 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 ADAD1Q96M93 576 aaKnown RBP12.8□□□□□ -0.36
CLCN4-201ENST00000380829 OR14A2Q96R54 314 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 SLC39A1Q9NY26 324 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 NXT1Q9UKK6 140 aaKnown RBP12.8□□□□□ -0.36
CLCN4-201ENST00000380829 GPR179Q6PRD1 2367 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 PLSCR5A0PG75 271 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 H3BML4 177 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 KLF7O75840 302 aaPredicted RBP12.8□□□□□ -0.36
CLCN4-201ENST00000380829 SP9P0CG40 484 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 THBS2P35442 1172 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 CENPAP49450 140 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 VEGFCP49767 419 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 NANOS3P60323 173 aaKnown RBP12.8□□□□□ -0.36
CLCN4-201ENST00000380829 RPL27P61353 136 aaKnown RBP12.8□□□□□ -0.36
CLCN4-201ENST00000380829 RPS11P62280 158 aaKnown RBP eCLIP12.8□□□□□ -0.36
CLCN4-201ENST00000380829 OR7A5Q15622 319 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 PDSS1Q5T2R2 415 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 SFRP4Q6FHJ7 346 aaPredicted RBP12.8□□□□□ -0.36
CLCN4-201ENST00000380829 DPY19L4Q7Z388 723 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.8□□□□□ -0.36
CLCN4-201ENST00000380829 SLC22A8Q8TCC7 542 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 MED9Q9NWA0 146 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 MLXQ9UH92 298 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 CPAMD8Q8IZJ3 1885 aa12.8□□□□□ -0.36
CLCN4-201ENST00000380829 A0A0B4J203 849 aa12.79□□□□□ -0.36
CLCN4-201ENST00000380829 C9J4A7 227 aa12.79□□□□□ -0.36
CLCN4-201ENST00000380829 FTCDNL1E5RQL4 147 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms