RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 KLF14Q8TD94 323 aaPredicted RBP14.66□□□□□ -0.06
HMGN1-204ENST00000380749 GEMIN6Q8WXD5 167 aaKnown RBP14.66□□□□□ -0.06
HMGN1-204ENST00000380749 RCN3Q96D15 328 aa14.66□□□□□ -0.06
HMGN1-204ENST00000380749 GAL3ST1Q99999 423 aa14.66□□□□□ -0.06
HMGN1-204ENST00000380749 OR2J1Q9GZK6 312 aa14.66□□□□□ -0.06
HMGN1-204ENST00000380749 NDEL1Q9GZM8 345 aa14.66□□□□□ -0.06
HMGN1-204ENST00000380749 ELOVL3Q9HB03 270 aa14.66□□□□□ -0.06
HMGN1-204ENST00000380749 G6PC2Q9NQR9 355 aa14.66□□□□□ -0.06
HMGN1-204ENST00000380749 NDRG4Q9ULP0 352 aaKnown RBP14.66□□□□□ -0.06
HMGN1-204ENST00000380749 TIMM10BQ9Y5J6 103 aa14.66□□□□□ -0.06
HMGN1-204ENST00000380749 C12orf71A8MTZ7 269 aa14.65□□□□□ -0.06
HMGN1-204ENST00000380749 EFCAB9A8MZ26 197 aa14.65□□□□□ -0.06
HMGN1-204ENST00000380749 ICMTO60725 284 aa14.65□□□□□ -0.06
HMGN1-204ENST00000380749 VENTXO95231 258 aa14.65□□□□□ -0.06
HMGN1-204ENST00000380749 IGHV2-5P01817 119 aa14.65□□□□□ -0.06
HMGN1-204ENST00000380749 MAKP20794 623 aa14.65□□□□□ -0.06
HMGN1-204ENST00000380749 EPHA1P21709 976 aa14.65□□□□□ -0.06
HMGN1-204ENST00000380749 SLC9A3P48764 834 aa14.65□□□□□ -0.06
HMGN1-204ENST00000380749 SF3A3Q12874 501 aaKnown RBP eCLIP14.65□□□□□ -0.066e-7■□□□□ 11.3
HMGN1-204ENST00000380749 C12orf54Q6X4T0 127 aa14.65□□□□□ -0.06
HMGN1-204ENST00000380749 FOXL2NBQ6ZUU3 175 aa14.65□□□□□ -0.06
HMGN1-204ENST00000380749 CLDN22Q8N7P3 220 aa14.65□□□□□ -0.06
HMGN1-204ENST00000380749 OR51A7Q8NH64 312 aa14.65□□□□□ -0.06
HMGN1-204ENST00000380749 DIRC2Q96SL1 478 aa14.65□□□□□ -0.06
HMGN1-204ENST00000380749 WNT5BQ9H1J7 359 aa14.65□□□□□ -0.06
HMGN1-204ENST00000380749 CACNG2Q9Y698 323 aa14.65□□□□□ -0.06
HMGN1-204ENST00000380749 ISPDA4D126 451 aa14.64□□□□□ -0.07
HMGN1-204ENST00000380749 ZSCAN5BA6NJL1 495 aa14.64□□□□□ -0.07
HMGN1-204ENST00000380749 PLPP2O43688 288 aa14.64□□□□□ -0.07
HMGN1-204ENST00000380749 DEAF1O75398 565 aaPredicted RBP14.64□□□□□ -0.07
HMGN1-204ENST00000380749 SASH3O75995 380 aa14.64□□□□□ -0.07
HMGN1-204ENST00000380749 ZNF682O95780 498 aa14.64□□□□□ -0.07
HMGN1-204ENST00000380749 ADH4P08319 380 aa14.64□□□□□ -0.07
HMGN1-204ENST00000380749 YAP1P46937 504 aaKnown RBP14.64□□□□□ -0.07
HMGN1-204ENST00000380749 PRKCDQ05655 676 aa14.64□□□□□ -0.07
HMGN1-204ENST00000380749 DCAF12L2Q5VW00 463 aa14.64□□□□□ -0.07
HMGN1-204ENST00000380749 ZNF774Q6NX45 483 aa14.64□□□□□ -0.07
HMGN1-204ENST00000380749 VTCN1Q7Z7D3 282 aa14.64□□□□□ -0.07
HMGN1-204ENST00000380749 ZER1Q7Z7L7 766 aa14.64□□□□□ -0.07
HMGN1-204ENST00000380749 SYT9Q86SS6 491 aa14.64□□□□□ -0.07
HMGN1-204ENST00000380749 PEG10Q86TG7 708 aaKnown RBP14.64□□□□□ -0.07
HMGN1-204ENST00000380749 ACOT11Q8WXI4 607 aaPredicted RBP14.64□□□□□ -0.07
HMGN1-204ENST00000380749 CCL17Q92583 94 aa14.64□□□□□ -0.07
HMGN1-204ENST00000380749 MAN2C1Q9NTJ4 1040 aa14.64□□□□□ -0.07
HMGN1-204ENST00000380749 RHCGQ9UBD6 479 aa14.64□□□□□ -0.07
HMGN1-204ENST00000380749 ZDHHC8Q9ULC8 765 aa14.64□□□□□ -0.07
HMGN1-204ENST00000380749 LOC105371242A0A075B767 164 aa14.63□□□□□ -0.07
HMGN1-204ENST00000380749 J3QLI3 93 aa14.63□□□□□ -0.07
HMGN1-204ENST00000380749 XKRYO14609 159 aa14.63□□□□□ -0.07
HMGN1-204ENST00000380749 TIMM8AO60220 97 aaPredicted RBP14.63□□□□□ -0.07
HMGN1-204ENST00000380749 ABHD16AO95870 558 aa14.63□□□□□ -0.07
HMGN1-204ENST00000380749 GSTM3P21266 225 aa14.63□□□□□ -0.07
HMGN1-204ENST00000380749 GATA3P23771 443 aa14.63□□□□□ -0.07
HMGN1-204ENST00000380749 RPL4P36578 427 aaKnown RBP14.63□□□□□ -0.07
HMGN1-204ENST00000380749 ACTG1P63261 375 aa14.63□□□□□ -0.07
HMGN1-204ENST00000380749 SCRN3Q0VDG4 424 aa14.63□□□□□ -0.07
HMGN1-204ENST00000380749 IFI44LQ53G44 452 aa14.63□□□□□ -0.07
HMGN1-204ENST00000380749 CGB2Q6NT52 195 aa14.63□□□□□ -0.07
HMGN1-204ENST00000380749 ZNF730Q6ZMV8 503 aa14.63□□□□□ -0.07
HMGN1-204ENST00000380749 RNF113BQ8IZP6 322 aaKnown RBP14.63□□□□□ -0.07
HMGN1-204ENST00000380749 LRRC75AQ8NAA5 344 aa14.63□□□□□ -0.07
HMGN1-204ENST00000380749 NPEPL1Q8NDH3 523 aa14.63□□□□□ -0.07
HMGN1-204ENST00000380749 OR13C2Q8NGS9 318 aa14.63□□□□□ -0.07
HMGN1-204ENST00000380749 C4orf45Q96LM5 186 aa14.63□□□□□ -0.07
HMGN1-204ENST00000380749 JMJD8Q96S16 334 aa14.63□□□□□ -0.07
HMGN1-204ENST00000380749 WACQ9BTA9 647 aa14.63□□□□□ -0.07
HMGN1-204ENST00000380749 POLE4Q9NR33 117 aa14.63□□□□□ -0.07
HMGN1-204ENST00000380749 GRHPRQ9UBQ7 328 aa14.63□□□□□ -0.07
HMGN1-204ENST00000380749 PCDHB10Q9UN67 800 aa14.63□□□□□ -0.07
HMGN1-204ENST00000380749 H7C1C5 153 aa14.62□□□□□ -0.07
HMGN1-204ENST00000380749 J3KTA2 159 aa14.62□□□□□ -0.07
HMGN1-204ENST00000380749 GSTA4O15217 222 aa14.62□□□□□ -0.07
HMGN1-204ENST00000380749 RGS9O75916 674 aaPredicted RBP14.62□□□□□ -0.07
HMGN1-204ENST00000380749 LCN6P62502 163 aa14.62□□□□□ -0.07
HMGN1-204ENST00000380749 ENDOGQ14249 297 aaKnown RBP14.62□□□□□ -0.07
HMGN1-204ENST00000380749 MTX3Q5HYI7 312 aa14.62□□□□□ -0.07
HMGN1-204ENST00000380749 TMEM255AQ5JRV8 349 aa14.62□□□□□ -0.07
HMGN1-204ENST00000380749 USP43Q70EL4 1123 aa14.62□□□□□ -0.07
HMGN1-204ENST00000380749 RRM2BQ7LG56 351 aa14.62□□□□□ -0.07
HMGN1-204ENST00000380749 C1QL2Q7Z5L3 287 aa14.62□□□□□ -0.07
HMGN1-204ENST00000380749 CYP4Z1Q86W10 505 aa14.62□□□□□ -0.07
HMGN1-204ENST00000380749 POU5F2Q8N7G0 328 aa14.62□□□□□ -0.07
HMGN1-204ENST00000380749 FAM156AQ8NDB6 213 aa14.62□□□□□ -0.07
HMGN1-204ENST00000380749 RP9Q8TA86 221 aaKnown RBP14.62□□□□□ -0.07
HMGN1-204ENST00000380749 ZNF570Q96NI8 536 aa14.62□□□□□ -0.07
HMGN1-204ENST00000380749 TMPRSS13Q9BYE2 586 aa14.62□□□□□ -0.07
HMGN1-204ENST00000380749 CMTM6Q9NX76 183 aa14.62□□□□□ -0.07
HMGN1-204ENST00000380749 ARMCX1Q9P291 453 aa14.62□□□□□ -0.07
HMGN1-204ENST00000380749 SNX13Q9Y5W8 968 aa14.62□□□□□ -0.07
HMGN1-204ENST00000380749 TRIM77I1YAP6 450 aa14.61□□□□□ -0.07
HMGN1-204ENST00000380749 CXCR6O00574 342 aa14.61□□□□□ -0.07
HMGN1-204ENST00000380749 DOK2O60496 412 aa14.61□□□□□ -0.07
HMGN1-204ENST00000380749 UBOX5O94941 541 aa14.61□□□□□ -0.07
HMGN1-204ENST00000380749 NGFP01138 241 aa14.61□□□□□ -0.07
HMGN1-204ENST00000380749 CD55P08174 381 aa14.61□□□□□ -0.07
HMGN1-204ENST00000380749 COX5BP10606 129 aa14.61□□□□□ -0.07
HMGN1-204ENST00000380749 TNFSF4P23510 183 aa14.61□□□□□ -0.07
HMGN1-204ENST00000380749 GPR4P46093 362 aa14.61□□□□□ -0.07
HMGN1-204ENST00000380749 HTR5AP47898 357 aa14.61□□□□□ -0.07
HMGN1-204ENST00000380749 HILS1P60008 231 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms