RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 NUBP2Q9Y5Y2 271 aa20.64■□□□□ 0.89
VPS16-201ENST00000380443 LAMA1P25391 3075 aa20.63■□□□□ 0.89
VPS16-201ENST00000380443 LNP1A1A4G5 178 aa20.63■□□□□ 0.89
VPS16-201ENST00000380443 AQP7P3A6NL99 342 aa20.63■□□□□ 0.89
VPS16-201ENST00000380443 GABARAPH6UMI1 98 aa20.63■□□□□ 0.89
VPS16-201ENST00000380443 STK17BO94768 372 aa20.63■□□□□ 0.89
VPS16-201ENST00000380443 PNPP00491 289 aa20.63■□□□□ 0.89
VPS16-201ENST00000380443 FSTP19883 344 aa20.63■□□□□ 0.89
VPS16-201ENST00000380443 RAB25P57735 213 aa20.63■□□□□ 0.89
VPS16-201ENST00000380443 CHAF1BQ13112 559 aa20.63■□□□□ 0.89
VPS16-201ENST00000380443 TMEM225Q6GV28 225 aa20.63■□□□□ 0.89
VPS16-201ENST00000380443 OR7E24Q6IFN5 339 aa20.63■□□□□ 0.89
VPS16-201ENST00000380443 C6orf15Q6UXA7 325 aaPredicted RBP20.63■□□□□ 0.89
VPS16-201ENST00000380443 TMPPEQ6ZT21 453 aa20.63■□□□□ 0.89
VPS16-201ENST00000380443 RHOUQ7L0Q8 258 aa20.63■□□□□ 0.89
VPS16-201ENST00000380443 KRT74Q7RTS7 529 aa20.63■□□□□ 0.89
VPS16-201ENST00000380443 DCXRQ7Z4W1 244 aa20.63■□□□□ 0.89
VPS16-201ENST00000380443 TMPRSS12Q86WS5 348 aa20.63■□□□□ 0.89
VPS16-201ENST00000380443 TMEM156Q8N614 296 aa20.63■□□□□ 0.89
VPS16-201ENST00000380443 NOXO1Q8NFA2 376 aa20.63■□□□□ 0.89
VPS16-201ENST00000380443 UBASH3BQ8TF42 649 aa20.63■□□□□ 0.89
VPS16-201ENST00000380443 RNF133Q8WVZ7 376 aa20.63■□□□□ 0.89
VPS16-201ENST00000380443 UPRTQ96BW1 309 aa20.63■□□□□ 0.89
VPS16-201ENST00000380443 DDA1Q9BW61 102 aa20.63■□□□□ 0.89
VPS16-201ENST00000380443 NEK6Q9HC98 313 aa20.63■□□□□ 0.89
VPS16-201ENST00000380443 HPF1Q9NWY4 346 aa20.63■□□□□ 0.89
VPS16-201ENST00000380443 A0A0B4J293 547 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 MEGF11A6BM72 1044 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 TLX3O43711 291 aaPredicted RBP20.62■□□□□ 0.89
VPS16-201ENST00000380443 DHFRP00374 187 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 ZNF17P17021 662 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 RAG2P55895 527 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 CLRN1P58418 232 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 FMODQ06828 376 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 PRAMEF20Q5VT98 475 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 TMEM244Q5VVB8 128 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 TIGD3Q6B0B8 471 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.62■□□□□ 0.89
VPS16-201ENST00000380443 DTX3Q8N9I9 347 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 SYNPRQ8TBG9 265 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 TMEM41AQ96HV5 264 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 TAAR9Q96RI9 348 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 EDEM2Q9BV94 578 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 ZNF160Q9HCG1 818 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 SLC17A5Q9NRA2 495 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 ITGB1BP2Q9UKP3 347 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 HHLA2Q9UM44 414 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 TRAV8-7A0A075B6U6 113 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 A0A087WV48 116 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 NAP1L6A6NFF2 107 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 TRAF3IP2O43734 574 aaPredicted RBP20.62■□□□□ 0.89
VPS16-201ENST00000380443 EIF1BO60739 113 aaKnown RBP20.62■□□□□ 0.89
VPS16-201ENST00000380443 MPZL1O95297 269 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 CELA2AP08217 269 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 PGA4P0DJD7 388 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 PGA3P0DJD8 388 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 LIFP15018 202 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 MMP16P51512 607 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 DGCR2P98153 550 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 SSPNQ14714 243 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 INPP5JQ15735 1006 aaPredicted RBP20.62■□□□□ 0.89
VPS16-201ENST00000380443 TMEM176BQ3YBM2 270 aaPredicted RBP20.62■□□□□ 0.89
VPS16-201ENST00000380443 OR1J4Q8NGS1 313 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 OR10AC1Q8NH08 325 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 OR2B2Q9GZK3 357 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 CDV3Q9UKY7 258 aaKnown RBP20.62■□□□□ 0.89
VPS16-201ENST00000380443 SLC22A13Q9Y226 551 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 ALG5Q9Y673 324 aa20.62■□□□□ 0.89
VPS16-201ENST00000380443 RIF1Q5UIP0 2472 aaKnown RBP20.62■□□□□ 0.89
VPS16-201ENST00000380443 EP300Q09472 2414 aaPredicted RBP20.61■□□□□ 0.89
VPS16-201ENST00000380443 SULT2B1O00204 365 aa20.61■□□□□ 0.89
VPS16-201ENST00000380443 VAMP5O95183 116 aa20.61■□□□□ 0.89
VPS16-201ENST00000380443 MAS1P04201 325 aa20.61■□□□□ 0.89
VPS16-201ENST00000380443 H2BFMP0C1H6 154 aa20.61■□□□□ 0.89
VPS16-201ENST00000380443 GSTT2BP0CG30 244 aa20.61■□□□□ 0.89
VPS16-201ENST00000380443 UBCP0CG48 685 aaKnown RBP20.61■□□□□ 0.89
VPS16-201ENST00000380443 CD37P11049 281 aa20.61■□□□□ 0.89
VPS16-201ENST00000380443 ZNF43P17038 809 aa20.61■□□□□ 0.89
VPS16-201ENST00000380443 ZFP69Q49AA0 526 aa20.61■□□□□ 0.89
VPS16-201ENST00000380443 OR51A4Q8NGJ6 313 aa20.61■□□□□ 0.89
VPS16-201ENST00000380443 DEDD2Q8WXF8 326 aa20.61■□□□□ 0.89
VPS16-201ENST00000380443 C11orf40Q8WZ69 217 aa20.61■□□□□ 0.89
VPS16-201ENST00000380443 C1orf198Q9H425 327 aa20.61■□□□□ 0.89
VPS16-201ENST00000380443 NIPAL2Q9H841 368 aa20.61■□□□□ 0.89
VPS16-201ENST00000380443 CYB5R1Q9UHQ9 305 aa20.61■□□□□ 0.89
VPS16-201ENST00000380443 OR52A1Q9UKL2 312 aa20.61■□□□□ 0.89
VPS16-201ENST00000380443 TCFL5Q9UL49 500 aa20.61■□□□□ 0.89
VPS16-201ENST00000380443 FAM186AA6NE01 2351 aa20.61■□□□□ 0.89
VPS16-201ENST00000380443 TEX51A0A1B0GUA7 166 aa20.6■□□□□ 0.89
VPS16-201ENST00000380443 CBR3O75828 277 aa20.6■□□□□ 0.89
VPS16-201ENST00000380443 HPP00738 406 aa20.6■□□□□ 0.89
VPS16-201ENST00000380443 CD3GP09693 182 aa20.6■□□□□ 0.89
VPS16-201ENST00000380443 KLF9Q13886 244 aaPredicted RBP20.6■□□□□ 0.89
VPS16-201ENST00000380443 TOMM20Q15388 145 aa20.6■□□□□ 0.89
VPS16-201ENST00000380443 LINGO2Q7L985 606 aa20.6■□□□□ 0.89
VPS16-201ENST00000380443 SIAH3Q8IW03 269 aa20.6■□□□□ 0.89
VPS16-201ENST00000380443 FCAMRQ8WWV6 532 aa20.6■□□□□ 0.89
VPS16-201ENST00000380443 ASB5Q8WWX0 329 aa20.6■□□□□ 0.89
VPS16-201ENST00000380443 RELTQ969Z4 430 aa20.6■□□□□ 0.89
VPS16-201ENST00000380443 ACTR6Q9GZN1 396 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms