RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 HS3ST1O14792 307 aa16.25■□□□□ 0.19
SSU72-203ENST00000378725 PTHP01270 115 aa16.25■□□□□ 0.19
SSU72-203ENST00000378725 CRYAAP02489 173 aa16.25■□□□□ 0.19
SSU72-203ENST00000378725 GYPBP06028 91 aa16.25■□□□□ 0.19
SSU72-203ENST00000378725 PRR23D2P0DMB1 279 aaPredicted RBP16.25■□□□□ 0.19
SSU72-203ENST00000378725 BLVRAP53004 296 aa16.25■□□□□ 0.19
SSU72-203ENST00000378725 PLP2Q04941 152 aa16.25■□□□□ 0.19
SSU72-203ENST00000378725 AQP6Q13520 282 aa16.25■□□□□ 0.19
SSU72-203ENST00000378725 MEP1BQ16820 701 aa16.25■□□□□ 0.19
SSU72-203ENST00000378725 PLBD1Q6P4A8 553 aa16.25■□□□□ 0.19
SSU72-203ENST00000378725 SLC22A25Q6T423 547 aa16.25■□□□□ 0.19
SSU72-203ENST00000378725 CPOQ8IVL8 374 aa16.25■□□□□ 0.19
SSU72-203ENST00000378725 CPEB3Q8NE35 698 aaKnown RBP16.25■□□□□ 0.19
SSU72-203ENST00000378725 OR51L1Q8NGJ5 315 aa16.25■□□□□ 0.19
SSU72-203ENST00000378725 AKAP1Q92667 903 aaKnown RBP eCLIP16.25■□□□□ 0.19
SSU72-203ENST00000378725 NEUROG1Q92886 237 aa16.25■□□□□ 0.19
SSU72-203ENST00000378725 PLEKHA8Q96JA3 519 aa16.25■□□□□ 0.19
SSU72-203ENST00000378725 C1orf198Q9H425 327 aa16.25■□□□□ 0.19
SSU72-203ENST00000378725 FBN2P35556 2912 aa16.24■□□□□ 0.19
SSU72-203ENST00000378725 IQCMA0A1B0GVH7 501 aa16.24■□□□□ 0.19
SSU72-203ENST00000378725 CYSRT1A8MQ03 144 aa16.24■□□□□ 0.19
SSU72-203ENST00000378725 CASQ2O14958 399 aaPredicted RBP16.24■□□□□ 0.19
SSU72-203ENST00000378725 PRKYO43930 277 aa16.24■□□□□ 0.19
SSU72-203ENST00000378725 FMO3P31513 532 aa16.24■□□□□ 0.19
SSU72-203ENST00000378725 GGT2P36268 569 aa16.24■□□□□ 0.19
SSU72-203ENST00000378725 HIST1H3AP68431 136 aa16.24■□□□□ 0.19
SSU72-203ENST00000378725 SCRN3Q0VDG4 424 aa16.24■□□□□ 0.19
SSU72-203ENST00000378725 HIST2H3PS2Q5TEC6 136 aa16.24■□□□□ 0.19
SSU72-203ENST00000378725 OTPQ5XKR4 325 aa16.24■□□□□ 0.19
SSU72-203ENST00000378725 HIST2H3AQ71DI3 136 aa16.24■□□□□ 0.19
SSU72-203ENST00000378725 KCNS3Q9BQ31 491 aa16.24■□□□□ 0.19
SSU72-203ENST00000378725 C8orf4Q9NR00 106 aa16.24■□□□□ 0.19
SSU72-203ENST00000378725 CISD1Q9NZ45 108 aaKnown RBP16.24■□□□□ 0.19
SSU72-203ENST00000378725 ASH2LQ9UBL3 628 aa16.24■□□□□ 0.19
SSU72-203ENST00000378725 KCNG2Q9UJ96 466 aa16.24■□□□□ 0.19
SSU72-203ENST00000378725 LHFPL6Q9Y693 200 aa16.24■□□□□ 0.19
SSU72-203ENST00000378725 CRYBG3Q68DQ2 2970 aa16.24■□□□□ 0.19
SSU72-203ENST00000378725 E7EQL1 145 aa16.23■□□□□ 0.19
SSU72-203ENST00000378725 ATP6V1G2-DDX39BF2Z307 99 aa16.23■□□□□ 0.19
SSU72-203ENST00000378725 GLCEO94923 617 aa16.23■□□□□ 0.19
SSU72-203ENST00000378725 HLA-DQA2P01906 255 aa16.23■□□□□ 0.19
SSU72-203ENST00000378725 SLC2A5P22732 501 aa16.23■□□□□ 0.19
SSU72-203ENST00000378725 HGFACQ04756 655 aa16.23■□□□□ 0.19
SSU72-203ENST00000378725 TRIP10Q15642 601 aa16.23■□□□□ 0.19
SSU72-203ENST00000378725 PCK2Q16822 640 aa16.23■□□□□ 0.19
SSU72-203ENST00000378725 ZIK1Q3SY52 487 aaPredicted RBP16.23■□□□□ 0.19
SSU72-203ENST00000378725 TEX30Q5JUR7 227 aa16.23■□□□□ 0.19
SSU72-203ENST00000378725 LPCAT4Q643R3 524 aa16.23■□□□□ 0.19
SSU72-203ENST00000378725 ZNF771Q7L3S4 317 aaPredicted RBP16.23■□□□□ 0.19
SSU72-203ENST00000378725 ALDH16A1Q8IZ83 802 aa16.23■□□□□ 0.19
SSU72-203ENST00000378725 ZNF611Q8N823 705 aa16.23■□□□□ 0.19
SSU72-203ENST00000378725 ZNF511Q8NB15 262 aa16.23■□□□□ 0.19
SSU72-203ENST00000378725 SLC30A7Q8NEW0 376 aa16.23■□□□□ 0.19
SSU72-203ENST00000378725 OR10H5Q8NGA6 315 aa16.23■□□□□ 0.19
SSU72-203ENST00000378725 OR4F15Q8NGB8 312 aa16.23■□□□□ 0.19
SSU72-203ENST00000378725 AKR7LQ8NHP1 331 aa16.23■□□□□ 0.19
SSU72-203ENST00000378725 HRASLS5Q96KN8 279 aa16.23■□□□□ 0.19
SSU72-203ENST00000378725 POM121L2Q96KW2 1035 aa16.23■□□□□ 0.19
SSU72-203ENST00000378725 MBOAT4Q96T53 435 aa16.23■□□□□ 0.19
SSU72-203ENST00000378725 OR51V1Q9H2C8 321 aa16.23■□□□□ 0.19
SSU72-203ENST00000378725 LIME1Q9H400 295 aa16.23■□□□□ 0.19
SSU72-203ENST00000378725 TOR3AQ9H497 397 aa16.23■□□□□ 0.19
SSU72-203ENST00000378725 MARCH7Q9H992 704 aa16.23■□□□□ 0.19
SSU72-203ENST00000378725 NKX1-2Q9UD57 310 aaPredicted RBP16.23■□□□□ 0.19
SSU72-203ENST00000378725 CYB5R1Q9UHQ9 305 aa16.23■□□□□ 0.19
SSU72-203ENST00000378725 TVP23AA6NH52 213 aa16.22■□□□□ 0.19
SSU72-203ENST00000378725 PRODHO43272 600 aa16.22■□□□□ 0.19
SSU72-203ENST00000378725 TLX2O43763 284 aaPredicted RBP16.22■□□□□ 0.19
SSU72-203ENST00000378725 COX5BP10606 129 aa16.22■□□□□ 0.19
SSU72-203ENST00000378725 ZNF823P16415 610 aa16.22■□□□□ 0.19
SSU72-203ENST00000378725 STOMP27105 288 aa16.22■□□□□ 0.19
SSU72-203ENST00000378725 APEX1P27695 318 aaKnown RBP16.22■□□□□ 0.19
SSU72-203ENST00000378725 CDH11P55287 796 aa16.22■□□□□ 0.19
SSU72-203ENST00000378725 CCDC92Q53HC0 331 aaPredicted RBP16.22■□□□□ 0.19
SSU72-203ENST00000378725 SLC35D3Q5M8T2 416 aa16.22■□□□□ 0.19
SSU72-203ENST00000378725 OGFRL1Q5TC84 451 aaPredicted RBP16.22■□□□□ 0.19
SSU72-203ENST00000378725 SLC18B1Q6NT16 456 aa16.22■□□□□ 0.19
SSU72-203ENST00000378725 ZNF774Q6NX45 483 aa16.22■□□□□ 0.19
SSU72-203ENST00000378725 LYPD4Q6UWN0 246 aa16.22■□□□□ 0.19
SSU72-203ENST00000378725 B3GLCTQ6Y288 498 aa16.22■□□□□ 0.19
SSU72-203ENST00000378725 CXXC5Q7LFL8 322 aaKnown RBP16.22■□□□□ 0.19
SSU72-203ENST00000378725 PACRGLQ8N7B6 248 aa16.22■□□□□ 0.19
SSU72-203ENST00000378725 TCEANCQ8N8B7 351 aa16.22■□□□□ 0.19
SSU72-203ENST00000378725 NUP37Q8NFH4 326 aa16.22■□□□□ 0.19
SSU72-203ENST00000378725 BBS1Q8NFJ9 593 aa16.22■□□□□ 0.19
SSU72-203ENST00000378725 GJC3Q8NFK1 279 aa16.22■□□□□ 0.19
SSU72-203ENST00000378725 OR1J2Q8NGS2 313 aa16.22■□□□□ 0.19
SSU72-203ENST00000378725 TMEM163Q8TC26 289 aa16.22■□□□□ 0.19
SSU72-203ENST00000378725 NRGNQ92686 78 aa16.22■□□□□ 0.19
SSU72-203ENST00000378725 OTULINQ96BN8 352 aa16.22■□□□□ 0.19
SSU72-203ENST00000378725 RDH12Q96NR8 316 aa16.22■□□□□ 0.19
SSU72-203ENST00000378725 CDADC1Q9BWV3 514 aa16.22■□□□□ 0.19
SSU72-203ENST00000378725 UBTD1Q9HAC8 227 aa16.22■□□□□ 0.19
SSU72-203ENST00000378725 ATP23Q9Y6H3 246 aa16.22■□□□□ 0.19
SSU72-203ENST00000378725 DCHS2Q6V1P9 2916 aa16.21■□□□□ 0.19
SSU72-203ENST00000378725 LOC100509620A0A075B734 347 aa16.21■□□□□ 0.19
SSU72-203ENST00000378725 DLGAP1O14490 977 aa16.21■□□□□ 0.19
SSU72-203ENST00000378725 RER1O15258 196 aa16.21■□□□□ 0.19
SSU72-203ENST00000378725 SGCEO43556 437 aa16.21■□□□□ 0.19
SSU72-203ENST00000378725 SNAP29O95721 258 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms