RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 SPAARA0A1B0GVQ0 90 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 NME2P1O60361 137 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 LAP3P28838 519 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 CLDN20P56880 219 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 SEMA3BQ13214 749 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 TMEM41BQ5BJD5 291 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 FAM219BQ5XKK7 198 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 ASTLQ6HA08 431 aaPredicted RBP10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 GINS3Q9BRX5 216 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 UBQLN3Q9H347 655 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 SLC39A9Q9NUM3 307 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 HS3ST2Q9Y278 367 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 SH2D7A6NKC9 451 aaPredicted RBP10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 LGI1O95970 557 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 KITLGP21583 273 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 ZNF93P35789 620 aaPredicted RBP10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 LIM2P55344 173 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 OR10A3P58181 314 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 PPIAP62937 165 aaKnown RBP10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 FER1L6Q2WGJ9 1857 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 PDLIM3Q53GG5 364 aaPredicted RBP10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 NECAP2Q9NVZ3 263 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 RAB22AQ9UL26 194 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 NDUFB7P17568 137 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 CSNK1G2P78368 415 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 SLC35D3Q5M8T2 416 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 FAAP20Q6NZ36 180 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 C17orf107Q6ZR85 190 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 BAGE3Q86Y29 109 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 BAGE2Q86Y30 109 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 RIMKLAQ8IXN7 391 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 SLC22A12Q96S37 553 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 OSGIN2Q9Y236 505 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 ASB1Q9Y576 335 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 ZNF195O14628 629 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 MAGEB4O15481 346 aaPredicted RBP10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 OR2C1O95371 312 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 LY86O95711 162 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 CSF3P09919 207 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 AADACP22760 399 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 PTGER4P35408 488 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 ZNF385BQ569K4 471 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 TIGD3Q6B0B8 471 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 ADAMTSL4Q6UY14 1074 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 ZNF439Q8NDP4 499 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 KCNG3Q8TAE7 436 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 PHIPQ8WWQ0 1821 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 MCRIP1C9JLW8 97 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 NRG2O14511 850 aaPredicted RBP10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 SOD1P00441 154 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 TEAD1P28347 426 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 EXOSC2Q13868 293 aaKnown RBP10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 RNF151Q2KHN1 245 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 MFSD12Q6NUT3 480 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 GLIPR1L1Q6UWM5 242 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 OR13C5Q8NGS8 318 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 LURAP1Q96LR2 239 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 NIPSNAP3BQ9BS92 247 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 ADAM19Q9H013 955 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 PIGLQ9Y2B2 252 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 A0A1W2PRV1 198 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 A1L4Q6 167 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 IAH1Q2TAA2 248 aaPredicted RBP10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 UHRF2Q96PU4 802 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 LANCL2Q9NS86 450 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 MARCH5Q9NX47 278 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 TAF1P21675 1872 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 A0A0B4J203 849 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 TMEM200CA6NKL6 621 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 ZFP92A6NM28 416 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 K7ESM1 405 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 SYT5O00445 386 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 CLDN1O95832 211 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 RD3LP0DJH9 198 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 HLA-DOBP13765 273 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 ELSPBP1Q96BH3 223 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 DUS3LQ96G46 650 aaKnown RBP10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 BSCL2Q96G97 398 aaPredicted RBP10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 LRFN5Q96NI6 719 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 FGF21Q9NSA1 209 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 MEX3AA1L020 520 aaKnown RBP10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 HLA-BQ31612 363 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 ACSM5Q6NUN0 579 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 BANF2Q9H503 90 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 UFSP2Q9NUQ7 469 aa10.98□□□□□ -0.65
PCDHA9-201ENST00000378122 IGLV3-10A0A075B6K4 115 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 H0Y8X5 98 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 PPP1R2P9O14990 202 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 KLKB1P03952 638 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 OPN5Q6U736 354 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 CD300LGQ6UXG3 332 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 HSD17B11Q8NBQ5 300 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 GABARAPH6UMI1 98 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 HCRTR1O43613 425 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 AQP6Q13520 282 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 ZNF425Q6IV72 752 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 Q6ZS52 159 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 RDH10Q8IZV5 341 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 UPRTQ96BW1 309 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms