RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 OR5V1Q9UGF6 321 aa7.99□□□□□ -1.13
PCDH9-202ENST00000377865 SUSD2Q9UGT4 822 aa7.99□□□□□ -1.13
PCDH9-202ENST00000377865 BHLHE40O14503 412 aa7.99□□□□□ -1.13
PCDH9-202ENST00000377865 ZNF728P0DKX0 622 aa7.99□□□□□ -1.13
PCDH9-202ENST00000377865 ZNF44P15621 663 aa7.99□□□□□ -1.13
PCDH9-202ENST00000377865 EFNA3P52797 238 aa7.99□□□□□ -1.13
PCDH9-202ENST00000377865 ZP2Q05996 745 aa7.99□□□□□ -1.13
PCDH9-202ENST00000377865 EIF2S3LQ2VIR3 472 aaKnown RBP7.99□□□□□ -1.13
PCDH9-202ENST00000377865 GPR157Q5UAW9 335 aa7.99□□□□□ -1.13
PCDH9-202ENST00000377865 C1orf140Q5VVS0 124 aa7.99□□□□□ -1.13
PCDH9-202ENST00000377865 GLIPR1L1Q6UWM5 242 aa7.99□□□□□ -1.13
PCDH9-202ENST00000377865 FAM57BQ71RH2 274 aa7.99□□□□□ -1.13
PCDH9-202ENST00000377865 DCXRQ7Z4W1 244 aa7.99□□□□□ -1.13
PCDH9-202ENST00000377865 PPP1R1CQ8WVI7 109 aa7.99□□□□□ -1.13
PCDH9-202ENST00000377865 HHIPL1Q96JK4 782 aa7.99□□□□□ -1.13
PCDH9-202ENST00000377865 SSX3Q99909 188 aa7.99□□□□□ -1.13
PCDH9-202ENST00000377865 ZNF346Q9UL40 294 aaKnown RBP7.99□□□□□ -1.13
PCDH9-202ENST00000377865 MCM3APO60318 1980 aa7.99□□□□□ -1.13
PCDH9-202ENST00000377865 MAP2K6P52564 334 aa7.99□□□□□ -1.13
PCDH9-202ENST00000377865 ATP1B3P54709 279 aa7.99□□□□□ -1.13
PCDH9-202ENST00000377865 EEF1A1P68104 462 aaKnown RBP7.99□□□□□ -1.13
PCDH9-202ENST00000377865 SSX2Q16385 188 aa7.99□□□□□ -1.13
PCDH9-202ENST00000377865 FBXW12Q6X9E4 464 aa7.99□□□□□ -1.13
PCDH9-202ENST00000377865 ZNF793Q6ZN11 406 aa7.99□□□□□ -1.13
PCDH9-202ENST00000377865 TMEM91Q6ZNR0 172 aa7.99□□□□□ -1.13
PCDH9-202ENST00000377865 OR2W3Q7Z3T1 314 aa7.99□□□□□ -1.13
PCDH9-202ENST00000377865 ARIH2OSQ8N7S6 290 aa7.99□□□□□ -1.13
PCDH9-202ENST00000377865 GLYATL2Q8WU03 294 aa7.99□□□□□ -1.13
PCDH9-202ENST00000377865 SLAMF9Q96A28 289 aa7.99□□□□□ -1.13
PCDH9-202ENST00000377865 RRNAD1Q96FB5 475 aaKnown RBP7.99□□□□□ -1.13
PCDH9-202ENST00000377865 TRMT61AQ96FX7 289 aaKnown RBP7.99□□□□□ -1.13
PCDH9-202ENST00000377865 OR5B2Q96R09 309 aa7.99□□□□□ -1.13
PCDH9-202ENST00000377865 NIT2Q9NQR4 276 aa7.99□□□□□ -1.13
PCDH9-202ENST00000377865 SPHK1Q9NYA1 384 aa7.99□□□□□ -1.13
PCDH9-202ENST00000377865 LOC102725191A0A1B0GVB3 256 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 CXCL10P02778 98 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 KLK3P07288 261 aaPredicted RBP7.98□□□□□ -1.13
PCDH9-202ENST00000377865 CXCL3P19876 107 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 NPY4RP50391 375 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 SNRPNP63162 240 aaKnown RBP7.98□□□□□ -1.13
PCDH9-202ENST00000377865 PNLIPRP3Q17RR3 467 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 FAM69BQ5VUD6 431 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 ASTLQ6HA08 431 aaPredicted RBP7.98□□□□□ -1.13
PCDH9-202ENST00000377865 MEX3BQ6ZN04 569 aaKnown RBP7.98□□□□□ -1.13
PCDH9-202ENST00000377865 GRINAQ7Z429 371 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 ZNF761Q86XN6 746 aaPredicted RBP7.98□□□□□ -1.13
PCDH9-202ENST00000377865 ZNF687Q8N1G0 1237 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 MUC20Q8N307 709 aaPredicted RBP7.98□□□□□ -1.13
PCDH9-202ENST00000377865 CXorf58Q96LI9 332 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 KLHL13Q9P2N7 655 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 SLC23A2Q9UGH3 650 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 ZNF107Q9UII5 783 aaPredicted RBP7.98□□□□□ -1.13
PCDH9-202ENST00000377865 SMCO3A2RU48 225 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 TRIM77I1YAP6 450 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 GSTP1P09211 210 aaKnown RBP7.98□□□□□ -1.13
PCDH9-202ENST00000377865 GABRA1P14867 456 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 PTAFRP25105 342 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 RAB13P51153 203 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 PLP2Q04941 152 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 RPL18Q07020 188 aaKnown RBP7.98□□□□□ -1.13
PCDH9-202ENST00000377865 TMEM65Q6PI78 240 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 C19orf48Q6RUI8 117 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 MAMSTRQ6ZN01 415 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 DOK3Q7L591 496 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 ZFP82Q8N141 532 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 FBXL6Q8N531 539 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 FAM213BQ8TBF2 198 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 NPRL2Q8WTW4 380 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 SDHCQ99643 169 aaPredicted RBP7.98□□□□□ -1.13
PCDH9-202ENST00000377865 GHITMQ9H3K2 345 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 ENY2Q9NPA8 101 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.98□□□□□ -1.13
PCDH9-202ENST00000377865 CUTCQ9NTM9 273 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 ZSWIM8A7E2V4 1837 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 A0A087WUJ7 227 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 MAGEB4O15481 346 aaPredicted RBP7.98□□□□□ -1.13
PCDH9-202ENST00000377865 GPR85P60893 370 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 RAB30Q15771 203 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 FAM74A1Q5RGS3 127 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 RAET1LQ5VY80 246 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 RHOUQ7L0Q8 258 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 C17orf47Q8NEP4 570 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 BAHD1Q8TBE0 780 aaPredicted RBP7.98□□□□□ -1.13
PCDH9-202ENST00000377865 C2CD4CQ8TF44 421 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 TMED6Q8WW62 240 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 SRPK3Q9UPE1 567 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 PUS1Q9Y606 427 aaKnown RBP eCLIP7.98□□□□□ -1.13
PCDH9-202ENST00000377865 MSTNO14793 375 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 ARPC3O15145 178 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 BLVRBP30043 206 aaPredicted RBP7.98□□□□□ -1.13
PCDH9-202ENST00000377865 IDH3GP51553 393 aaPredicted RBP7.98□□□□□ -1.13
PCDH9-202ENST00000377865 HNRNPKP61978 463 aaKnown RBP eCLIP7.98□□□□□ -1.13
PCDH9-202ENST00000377865 KCNIP4Q6PIL6 250 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 OR9K2Q8NGE7 335 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 OIT3Q8WWZ8 545 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 FGF13Q92913 245 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 EMG1Q92979 244 aaKnown RBP7.98□□□□□ -1.13
PCDH9-202ENST00000377865 PTDSS2Q9BVG9 487 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 VN1R3Q9BXE9 311 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 CHRDQ9H2X0 955 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms