RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 ULBP3Q9BZM4 244 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 CKAP5Q14008 2032 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 GPR31O00270 319 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 ARNTLO00327 626 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 SLC25A6P12236 298 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 SDC1P18827 310 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 RTL8AQ9BWD3 113 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 JAM3Q9BX67 310 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 CCR7P32248 378 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 FCN2Q15485 313 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 ETFDHQ16134 617 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 DHRS7BQ6IAN0 325 aaPredicted RBP10.73□□□□□ -0.69
VPS13A-205ENST00000376636 C14orf80Q86SX3 495 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 OR5AP2Q8NGF4 316 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 FAM174AQ8TBP5 190 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 OR2A14Q96R47 310 aa10.73□□□□□ -0.69
VPS13A-205ENST00000376636 SH2D1BO14796 132 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 POU3F3P20264 500 aaPredicted RBP10.72□□□□□ -0.69
VPS13A-205ENST00000376636 PSMB6P28072 239 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 DRAM2Q6UX65 266 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 ZNF813Q6ZN06 617 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 OR2AK2Q8NG84 335 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 NDUFB11Q9NX14 153 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 MARCH4Q9P2E8 410 aaPredicted RBP10.72□□□□□ -0.69
VPS13A-205ENST00000376636 LOC102724200A0A096LPH7 203 aaPredicted RBP10.72□□□□□ -0.69
VPS13A-205ENST00000376636 CBLL1Q75N03 491 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 NDUFB7P17568 137 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 PPOXP50336 477 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 SSBP1Q04837 148 aaKnown RBP10.72□□□□□ -0.69
VPS13A-205ENST00000376636 SLC5A12Q1EHB4 618 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 ZNF628Q5EBL2 1059 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 OR51S1Q8NGJ8 323 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 HS3ST1O14792 307 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 INHBCP55103 352 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 ZNF761Q86XN6 746 aaPredicted RBP10.72□□□□□ -0.69
VPS13A-205ENST00000376636 MTCL1Q9Y4B5 1905 aaKnown RBP10.72□□□□□ -0.69
VPS13A-205ENST00000376636 DEFB110Q30KQ9 67 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 TMEM176BQ3YBM2 270 aaPredicted RBP10.72□□□□□ -0.69
VPS13A-205ENST00000376636 TP53BP1Q12888 1972 aaPredicted RBP10.72□□□□□ -0.69
VPS13A-205ENST00000376636 M0QYG6 137 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 OR8G3PP0DMU2 310 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 CLDN12P56749 244 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 PAX5Q02548 391 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 OR5AR1Q8NGP9 310 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 UBALD1Q8TB05 177 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 FOXN4Q96NZ1 517 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 TOX3O15405 576 aaPredicted RBP10.72□□□□□ -0.69
VPS13A-205ENST00000376636 ZNF354AO60765 605 aaPredicted RBP10.72□□□□□ -0.69
VPS13A-205ENST00000376636 DOC2BQ14184 412 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 EDDM3AQ14507 147 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 A3GALT2U3KPV4 340 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 PMCHP20382 165 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 HERVK_113P61574 105 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 SPANXN5Q5MJ07 72 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 WDR73Q6P4I2 378 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 RTP4Q96DX8 246 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 UBQLN3Q9H347 655 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 ZNF768Q9H5H4 540 aaKnown RBP10.72□□□□□ -0.69
VPS13A-205ENST00000376636 TRAV36DV7A0A075B6V5 113 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 ZNF814B7Z6K7 855 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 RAB27BO00194 218 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 MT-ATP6P00846 226 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 CFHP08603 1231 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 GPR78Q96P69 363 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 PECRQ9BY49 303 aa10.72□□□□□ -0.69
VPS13A-205ENST00000376636 CRISP2P16562 243 aa10.71□□□□□ -0.69
VPS13A-205ENST00000376636 MAP2K6P52564 334 aa10.71□□□□□ -0.69
VPS13A-205ENST00000376636 C12orf42Q96LP6 360 aa10.71□□□□□ -0.69
VPS13A-205ENST00000376636 AJAP1Q9UKB5 411 aaPredicted RBP10.71□□□□□ -0.69
VPS13A-205ENST00000376636 CSO75390 466 aaKnown RBP10.71□□□□□ -0.69
VPS13A-205ENST00000376636 LYSMD4Q5XG99 296 aa10.71□□□□□ -0.69
VPS13A-205ENST00000376636 PLPP7Q8NBV4 271 aa10.71□□□□□ -0.69
VPS13A-205ENST00000376636 FAM3CQ92520 227 aa10.71□□□□□ -0.69
VPS13A-205ENST00000376636 OR1A1Q9P1Q5 309 aa10.71□□□□□ -0.69
VPS13A-205ENST00000376636 DIMT1Q9UNQ2 313 aaKnown RBP10.71□□□□□ -0.69
VPS13A-205ENST00000376636 MDC1Q14676 2089 aaKnown RBP10.71□□□□□ -0.69
VPS13A-205ENST00000376636 NUP188Q5SRE5 1749 aa10.71□□□□□ -0.69
VPS13A-205ENST00000376636 GASTP01350 101 aa10.71□□□□□ -0.69
VPS13A-205ENST00000376636 ASAH1Q13510 395 aa10.71□□□□□ -0.69
VPS13A-205ENST00000376636 ZNF528Q3MIS6 628 aa10.71□□□□□ -0.69
VPS13A-205ENST00000376636 AAED1Q7RTV5 226 aa10.71□□□□□ -0.69
VPS13A-205ENST00000376636 DRD1P21728 446 aa10.71□□□□□ -0.69
VPS13A-205ENST00000376636 RPL12P30050 165 aaKnown RBP10.71□□□□□ -0.69
VPS13A-205ENST00000376636 KCNJ10P78508 379 aa10.71□□□□□ -0.69
VPS13A-205ENST00000376636 CYHR1Q6ZMK1 362 aa10.71□□□□□ -0.69
VPS13A-205ENST00000376636 DDOQ99489 341 aa10.71□□□□□ -0.69
VPS13A-205ENST00000376636 DCAF12Q5T6F0 453 aa10.71□□□□□ -0.69
VPS13A-205ENST00000376636 LHFPL2Q6ZUX7 228 aa10.71□□□□□ -0.69
VPS13A-205ENST00000376636 LYSMD2Q8IV50 215 aa10.71□□□□□ -0.69
VPS13A-205ENST00000376636 OR13F1Q8NGS4 319 aa10.71□□□□□ -0.69
VPS13A-205ENST00000376636 SLC35B4Q969S0 331 aa10.71□□□□□ -0.69
VPS13A-205ENST00000376636 OR10C1Q96KK4 312 aa10.71□□□□□ -0.69
VPS13A-205ENST00000376636 IER5LQ5T953 404 aa10.71□□□□□ -0.7
VPS13A-205ENST00000376636 ARRDC3Q96B67 414 aa10.71□□□□□ -0.7
VPS13A-205ENST00000376636 MACROD1Q9BQ69 325 aa10.71□□□□□ -0.7
VPS13A-205ENST00000376636 PSORS1C1Q9UIG5 152 aa10.71□□□□□ -0.7
VPS13A-205ENST00000376636 CCDC187A0A096LP49 1063 aa10.71□□□□□ -0.7
VPS13A-205ENST00000376636 GOSR1O95249 250 aa10.71□□□□□ -0.7
VPS13A-205ENST00000376636 FABP4P15090 132 aa10.71□□□□□ -0.7
VPS13A-205ENST00000376636 OR51H1Q8NH63 302 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms