RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 SFRP5Q5T4F7 317 aa20.11■□□□□ 0.81
HLA-C-202ENST00000376237 RNLSQ5VYX0 342 aa20.11■□□□□ 0.81
HLA-C-202ENST00000376237 OR10H4Q8NGA5 316 aa20.11■□□□□ 0.81
HLA-C-202ENST00000376237 OR2AJ1Q8NGZ0 328 aa20.11■□□□□ 0.81
HLA-C-202ENST00000376237 SIGLEC11Q96RL6 698 aa20.11■□□□□ 0.81
HLA-C-202ENST00000376237 ZNF416Q9BWM5 594 aa20.11■□□□□ 0.81
HLA-C-202ENST00000376237 EMC7Q9NPA0 242 aa20.11■□□□□ 0.81
HLA-C-202ENST00000376237 LAMP5Q9UJQ1 280 aa20.11■□□□□ 0.81
HLA-C-202ENST00000376237 EXOSC1Q9Y3B2 195 aaKnown RBP20.11■□□□□ 0.81
HLA-C-202ENST00000376237 CFAP46Q8IYW2 2715 aa20.1■□□□□ 0.81
HLA-C-202ENST00000376237 INTS1Q8N201 2190 aaKnown RBP20.1■□□□□ 0.81
HLA-C-202ENST00000376237 ZNF670-ZNF695F2Z2N8 137 aa20.1■□□□□ 0.81
HLA-C-202ENST00000376237 SEC14L2O76054 403 aa20.1■□□□□ 0.81
HLA-C-202ENST00000376237 ALOX5APP20292 161 aa20.1■□□□□ 0.81
HLA-C-202ENST00000376237 PSMB1P20618 241 aaKnown RBP20.1■□□□□ 0.81
HLA-C-202ENST00000376237 PCBD1P61457 104 aa20.1■□□□□ 0.81
HLA-C-202ENST00000376237 AQP6Q13520 282 aa20.1■□□□□ 0.81
HLA-C-202ENST00000376237 ENDOGQ14249 297 aaKnown RBP20.1■□□□□ 0.81
HLA-C-202ENST00000376237 GABRA6Q16445 453 aa20.1■□□□□ 0.81
HLA-C-202ENST00000376237 SLC18B1Q6NT16 456 aa20.1■□□□□ 0.81
HLA-C-202ENST00000376237 KLHL24Q6TFL4 600 aa20.1■□□□□ 0.81
HLA-C-202ENST00000376237 LRRC18Q8N456 261 aa20.1■□□□□ 0.81
HLA-C-202ENST00000376237 LILRB4Q8NHJ6 448 aa20.1■□□□□ 0.81
HLA-C-202ENST00000376237 BCL2L2Q92843 193 aaPredicted RBP20.1■□□□□ 0.81
HLA-C-202ENST00000376237 USB1Q9BQ65 265 aaKnown RBP20.1■□□□□ 0.81
HLA-C-202ENST00000376237 CDCA4Q9BXL8 241 aa20.1■□□□□ 0.81
HLA-C-202ENST00000376237 CCDC90BQ9GZT6 254 aa20.1■□□□□ 0.81
HLA-C-202ENST00000376237 GALNT8Q9NY28 637 aa20.1■□□□□ 0.81
HLA-C-202ENST00000376237 ERVK-18Q9QC07 812 aa20.1■□□□□ 0.81
HLA-C-202ENST00000376237 SLC5A6Q9Y289 635 aa20.1■□□□□ 0.81
HLA-C-202ENST00000376237 FREM1Q5H8C1 2179 aa20.09■□□□□ 0.81
HLA-C-202ENST00000376237 DAPL1A0PJW8 107 aa20.09■□□□□ 0.81
HLA-C-202ENST00000376237 LYZL6O75951 148 aa20.09■□□□□ 0.81
HLA-C-202ENST00000376237 C21orf33P30042 268 aaPredicted RBP20.09■□□□□ 0.81
HLA-C-202ENST00000376237 SLC16A14Q7RTX9 510 aa20.09■□□□□ 0.81
HLA-C-202ENST00000376237 CXorf67Q86X51 503 aaPredicted RBP20.09■□□□□ 0.81
HLA-C-202ENST00000376237 EGFL6Q8IUX8 553 aa20.09■□□□□ 0.81
HLA-C-202ENST00000376237 SKA3Q8IX90 412 aa20.09■□□□□ 0.81
HLA-C-202ENST00000376237 C17orf78Q8N4C9 275 aa20.09■□□□□ 0.81
HLA-C-202ENST00000376237 ASB17Q8WXJ9 295 aa20.09■□□□□ 0.81
HLA-C-202ENST00000376237 MRPL48Q96GC5 212 aaKnown RBP20.09■□□□□ 0.81
HLA-C-202ENST00000376237 SH3GL3Q99963 347 aa20.09■□□□□ 0.81
HLA-C-202ENST00000376237 ASH2LQ9UBL3 628 aa20.09■□□□□ 0.81
HLA-C-202ENST00000376237 SNX5Q9Y5X3 404 aa20.09■□□□□ 0.81
HLA-C-202ENST00000376237 ESPL1Q14674 2120 aa20.09■□□□□ 0.81
HLA-C-202ENST00000376237 NBASA2RRP1 2371 aa20.09■□□□□ 0.81
HLA-C-202ENST00000376237 RPSAP08865 295 aaKnown RBP20.08■□□□□ 0.81
HLA-C-202ENST00000376237 SLC36A2Q495M3 483 aa20.08■□□□□ 0.81
HLA-C-202ENST00000376237 C1QTNF12Q5T7M4 302 aa20.08■□□□□ 0.81
HLA-C-202ENST00000376237 OTPQ5XKR4 325 aa20.08■□□□□ 0.81
HLA-C-202ENST00000376237 ZNF773Q6PK81 442 aa20.08■□□□□ 0.81
HLA-C-202ENST00000376237 GJC3Q8NFK1 279 aa20.08■□□□□ 0.81
HLA-C-202ENST00000376237 TSPAN14Q8NG11 270 aa20.08■□□□□ 0.81
HLA-C-202ENST00000376237 THEM6Q8WUY1 208 aa20.08■□□□□ 0.81
HLA-C-202ENST00000376237 NANOS1Q8WY41 292 aaKnown RBP20.08■□□□□ 0.81
HLA-C-202ENST00000376237 SGCDQ92629 289 aa20.08■□□□□ 0.81
HLA-C-202ENST00000376237 HTRA1Q92743 480 aa20.08■□□□□ 0.81
HLA-C-202ENST00000376237 C1orf198Q9H425 327 aa20.08■□□□□ 0.81
HLA-C-202ENST00000376237 ERVK13-1Q9NX77 482 aa20.08■□□□□ 0.81
HLA-C-202ENST00000376237 LHFPL6Q9Y693 200 aa20.08■□□□□ 0.81
HLA-C-202ENST00000376237 CHD6Q8TD26 2715 aa20.08■□□□□ 0.8
HLA-C-202ENST00000376237 A0A087WXM4 84 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 A0A096LPE4 126 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 A0A1W2PPZ6 126 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 A0A1W2PQL4 384 aaPredicted RBP20.07■□□□□ 0.8
HLA-C-202ENST00000376237 RAD51DO75771 328 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 AGAP20933 346 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 RPS27P42677 84 aaKnown RBP20.07■□□□□ 0.8
HLA-C-202ENST00000376237 ASCL1P50553 236 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 HCCSP53701 268 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 MVKQ03426 396 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 SCRN3Q0VDG4 424 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 EIF2B1Q14232 305 aaKnown RBP20.07■□□□□ 0.8
HLA-C-202ENST00000376237 GALEQ14376 348 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 TBRG1Q3YBR2 411 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 KCTD18Q6PI47 426 aaPredicted RBP20.07■□□□□ 0.8
HLA-C-202ENST00000376237 STAC2Q6ZMT1 411 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 RHOUQ7L0Q8 258 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 BHLHA15Q7RTS1 189 aaPredicted RBP20.07■□□□□ 0.8
HLA-C-202ENST00000376237 CA5BP1Q8WTZ4 195 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 SMAP2Q8WU79 429 aaPredicted RBP20.07■□□□□ 0.8
HLA-C-202ENST00000376237 TBX5Q99593 518 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 ERGIC3Q9Y282 383 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 TIMM10BQ9Y5J6 103 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 HTR1AP08908 422 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 IL32P24001 234 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 HOXC12P31275 282 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 CD79BP40259 229 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 CDH15P55291 814 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 PIGFQ07326 219 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 FBXL19-AS1Q494R0 122 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 XKRXQ6PP77 449 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 DCXRQ7Z4W1 244 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 LINC00346Q8IVM7 164 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 SVOPQ8N4V2 548 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 FBXO17Q96EF6 278 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 LRRC46Q96FV0 321 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 ABHD6Q9BV23 337 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 OBP2BQ9NPH6 170 aa20.07■□□□□ 0.8
HLA-C-202ENST00000376237 GDF2Q9UK05 429 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms