RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 NGFP01138 241 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 RPL4P36578 427 aaKnown RBP12.11□□□□□ -0.47
NELFE-201ENST00000375425 GPR4P46093 362 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 MMP15P51511 669 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 LCN6P62502 163 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 MVKQ03426 396 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 ENDOGQ14249 297 aaKnown RBP12.11□□□□□ -0.47
NELFE-201ENST00000375425 ZBED5Q49AG3 693 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 TMEM255AQ5JRV8 349 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 AVPI1Q5T686 147 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 MBNL2Q5VZF2 373 aaKnown RBP12.11□□□□□ -0.47
NELFE-201ENST00000375425 ZNF774Q6NX45 483 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 TMPRSS11FQ6ZWK6 438 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 USP51Q70EK9 711 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 TSEN54Q7Z6J9 526 aaKnown RBP12.11□□□□□ -0.47
NELFE-201ENST00000375425 OR51F2Q8NH61 342 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 ABHD4Q8TB40 342 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 KLF14Q8TD94 323 aaPredicted RBP12.11□□□□□ -0.47
NELFE-201ENST00000375425 IPCEF1Q8WWN9 437 aaPredicted RBP12.11□□□□□ -0.47
NELFE-201ENST00000375425 FAM162AQ96A26 154 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 SAP30LQ9HAJ7 183 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 GRHPRQ9UBQ7 328 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 CACNG2Q9Y698 323 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 PLSCR5A0PG75 271 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 NDUFAB1O14561 156 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 TCF21O43680 179 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 IGHV1-46P01743 117 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 CD14P08571 375 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 ANPEPP15144 967 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 NCK1P16333 377 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 ZNF26P17031 533 aaPredicted RBP12.11□□□□□ -0.47
NELFE-201ENST00000375425 MSR1P21757 451 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 NUDT2P50583 147 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 HFEQ30201 348 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 FAM209AQ5JX71 171 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 HACD2Q6Y1H2 254 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 RFPL4BQ6ZWI9 263 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 SYT9Q86SS6 491 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 CYP4Z1Q86W10 505 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 C1orf174Q8IYL3 243 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 SLC7A13Q8TCU3 470 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 C4orf45Q96LM5 186 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 Q96M85 177 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 LRRC37BQ96QE4 947 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 KCTD14Q9BQ13 255 aaPredicted RBP12.11□□□□□ -0.47
NELFE-201ENST00000375425 POLE4Q9NR33 117 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 METRNQ9UJH8 293 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 GRIP1Q9Y3R0 1128 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 ENPP4Q9Y6X5 453 aa12.11□□□□□ -0.47
NELFE-201ENST00000375425 C12orf71A8MTZ7 269 aa12.1□□□□□ -0.47
NELFE-201ENST00000375425 XKRYO14609 159 aa12.1□□□□□ -0.47
NELFE-201ENST00000375425 ICMTO60725 284 aa12.1□□□□□ -0.47
NELFE-201ENST00000375425 ARHGDIAP52565 204 aa12.1□□□□□ -0.47
NELFE-201ENST00000375425 PPP1CBP62140 327 aa12.1□□□□□ -0.47
NELFE-201ENST00000375425 FAHD2BQ6P2I3 314 aaPredicted RBP12.1□□□□□ -0.47
NELFE-201ENST00000375425 FAM122BQ7Z309 247 aa12.1□□□□□ -0.47
NELFE-201ENST00000375425 FAM156AQ8NDB6 213 aa12.1□□□□□ -0.47
NELFE-201ENST00000375425 CCL17Q92583 94 aa12.1□□□□□ -0.47
NELFE-201ENST00000375425 FAHD2AQ96GK7 314 aa12.1□□□□□ -0.47
NELFE-201ENST00000375425 ANKRD19PQ9H560 264 aa12.1□□□□□ -0.47
NELFE-201ENST00000375425 ZNF665Q9H7R5 613 aa12.1□□□□□ -0.47
NELFE-201ENST00000375425 ELOVL3Q9HB03 270 aa12.1□□□□□ -0.47
NELFE-201ENST00000375425 EMC7Q9NPA0 242 aa12.1□□□□□ -0.47
NELFE-201ENST00000375425 MED4Q9NPJ6 270 aa12.1□□□□□ -0.47
NELFE-201ENST00000375425 KLHL21Q9UJP4 597 aa12.1□□□□□ -0.47
NELFE-201ENST00000375425 A0A1W2PRQ8 180 aa12.09□□□□□ -0.47
NELFE-201ENST00000375425 PRSS37A4D1T9 235 aa12.09□□□□□ -0.47
NELFE-201ENST00000375425 CLDN25C9JDP6 229 aa12.09□□□□□ -0.47
NELFE-201ENST00000375425 AHCYL1O43865 530 aa12.09□□□□□ -0.47
NELFE-201ENST00000375425 PTP4A3O75365 173 aa12.09□□□□□ -0.47
NELFE-201ENST00000375425 H1F0P07305 194 aaKnown RBP12.09□□□□□ -0.47
NELFE-201ENST00000375425 LIPAP38571 399 aa12.09□□□□□ -0.47
NELFE-201ENST00000375425 PSME3P61289 254 aa12.09□□□□□ -0.47
NELFE-201ENST00000375425 DGCR6Q14129 220 aa12.09□□□□□ -0.47
NELFE-201ENST00000375425 MESTQ5EB52 335 aa12.09□□□□□ -0.47
NELFE-201ENST00000375425 GLYATQ6IB77 296 aa12.09□□□□□ -0.47
NELFE-201ENST00000375425 ACSM5Q6NUN0 579 aa12.09□□□□□ -0.47
NELFE-201ENST00000375425 ARL9Q6T311 187 aa12.09□□□□□ -0.47
NELFE-201ENST00000375425 CMTM5Q96DZ9 223 aa12.09□□□□□ -0.47
NELFE-201ENST00000375425 ELMOD3Q96FG2 381 aa12.09□□□□□ -0.47
NELFE-201ENST00000375425 FAM46AQ96IP4 442 aaKnown RBP12.09□□□□□ -0.47
NELFE-201ENST00000375425 ZNF570Q96NI8 536 aa12.09□□□□□ -0.47
NELFE-201ENST00000375425 ELAC2Q9BQ52 826 aaKnown RBP12.09□□□□□ -0.47
NELFE-201ENST00000375425 WACQ9BTA9 647 aa12.09□□□□□ -0.47
NELFE-201ENST00000375425 OCEL1Q9H607 264 aa12.09□□□□□ -0.47
NELFE-201ENST00000375425 METTL17Q9H7H0 456 aaPredicted RBP12.09□□□□□ -0.47
NELFE-201ENST00000375425 CYSLTR2Q9NS75 346 aa12.09□□□□□ -0.47
NELFE-201ENST00000375425 NDUFAF4Q9P032 175 aa12.09□□□□□ -0.47
NELFE-201ENST00000375425 ABCD2Q9UBJ2 740 aa12.09□□□□□ -0.47
NELFE-201ENST00000375425 EGFL7Q9UHF1 273 aa12.09□□□□□ -0.47
NELFE-201ENST00000375425 RPS6KA6Q9UK32 745 aa12.09□□□□□ -0.47
NELFE-201ENST00000375425 NDRG4Q9ULP0 352 aaKnown RBP12.09□□□□□ -0.47
NELFE-201ENST00000375425 TMEM5Q9Y2B1 443 aa12.09□□□□□ -0.47
NELFE-201ENST00000375425 FAM32AQ9Y421 112 aaKnown RBP12.09□□□□□ -0.47
NELFE-201ENST00000375425 WIPI2Q9Y4P8 454 aa12.09□□□□□ -0.47
NELFE-201ENST00000375425 TRAV20A0A0B4J274 112 aa12.08□□□□□ -0.48
NELFE-201ENST00000375425 ZSCAN5BA6NJL1 495 aa12.08□□□□□ -0.48
NELFE-201ENST00000375425 UBOX5O94941 541 aa12.08□□□□□ -0.48
NELFE-201ENST00000375425 ABHD16AO95870 558 aa12.08□□□□□ -0.48
NELFE-201ENST00000375425 CTLA4P16410 223 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms