RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 SLC25A18Q9H1K4 315 aa16.02■□□□□ 0.16
HLA-DQB1-201ENST00000374943 MALT1Q9UDY8 824 aa16.02■□□□□ 0.16
HLA-DQB1-201ENST00000374943 CYB5R1Q9UHQ9 305 aa16.02■□□□□ 0.16
HLA-DQB1-201ENST00000374943 IFITM5A6NNB3 132 aa16.02■□□□□ 0.15
HLA-DQB1-201ENST00000374943 TLX3O43711 291 aaPredicted RBP16.02■□□□□ 0.15
HLA-DQB1-201ENST00000374943 CNR1P21554 472 aa16.02■□□□□ 0.15
HLA-DQB1-201ENST00000374943 MAGEB1P43366 347 aa16.02■□□□□ 0.15
HLA-DQB1-201ENST00000374943 RFX2P48378 723 aa16.02■□□□□ 0.15
HLA-DQB1-201ENST00000374943 MFGE8Q08431 387 aaPredicted RBP16.02■□□□□ 0.15
HLA-DQB1-201ENST00000374943 KCNMB1Q16558 191 aa16.02■□□□□ 0.15
HLA-DQB1-201ENST00000374943 DCAF10Q5QP82 559 aa16.02■□□□□ 0.15
HLA-DQB1-201ENST00000374943 LRRTM1Q86UE6 522 aa16.02■□□□□ 0.15
HLA-DQB1-201ENST00000374943 OR5H6Q8NGV6 325 aa16.02■□□□□ 0.15
HLA-DQB1-201ENST00000374943 NEURL2Q9BR09 285 aa16.02■□□□□ 0.15
HLA-DQB1-201ENST00000374943 TCF7L1Q9HCS4 588 aa16.02■□□□□ 0.15
HLA-DQB1-201ENST00000374943 DEPPQ9NTK1 212 aa16.02■□□□□ 0.15
HLA-DQB1-201ENST00000374943 STMN3Q9NZ72 180 aa16.02■□□□□ 0.15
HLA-DQB1-201ENST00000374943 V9GY05 133 aa16.02■□□□□ 0.15
HLA-DQB1-201ENST00000374943 RIF1Q5UIP0 2472 aaKnown RBP16.01■□□□□ 0.15
HLA-DQB1-201ENST00000374943 A0A0J9YW62 118 aa16.01■□□□□ 0.15
HLA-DQB1-201ENST00000374943 ZNF726A6NNF4 738 aa16.01■□□□□ 0.15
HLA-DQB1-201ENST00000374943 SNRPBP14678 240 aaKnown RBP16.01■□□□□ 0.15
HLA-DQB1-201ENST00000374943 CD82P27701 267 aa16.01■□□□□ 0.15
HLA-DQB1-201ENST00000374943 DCTDP32321 178 aa16.01■□□□□ 0.15
HLA-DQB1-201ENST00000374943 ZNF133P52736 654 aaPredicted RBP16.01■□□□□ 0.15
HLA-DQB1-201ENST00000374943 AIMP2Q13155 320 aaKnown RBP16.01■□□□□ 0.15
HLA-DQB1-201ENST00000374943 TRIQKQ629K1 86 aa16.01■□□□□ 0.15
HLA-DQB1-201ENST00000374943 LINC00346Q8IVM7 164 aa16.01■□□□□ 0.15
HLA-DQB1-201ENST00000374943 OR10AC1Q8NH08 325 aa16.01■□□□□ 0.15
HLA-DQB1-201ENST00000374943 ADAMTS14Q8WXS8 1223 aa16.01■□□□□ 0.15
HLA-DQB1-201ENST00000374943 ORAI1Q96D31 301 aa16.01■□□□□ 0.15
HLA-DQB1-201ENST00000374943 SLC22A4Q9H015 551 aa16.01■□□□□ 0.15
HLA-DQB1-201ENST00000374943 BRD7Q9NPI1 651 aa16.01■□□□□ 0.15
HLA-DQB1-201ENST00000374943 ABI3Q9P2A4 366 aa16.01■□□□□ 0.15
HLA-DQB1-201ENST00000374943 SPTBN4Q9H254 2564 aa16.01■□□□□ 0.15
HLA-DQB1-201ENST00000374943 MED13Q9UHV7 2174 aa16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 A0A0G2JMP0 313 aa16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 A0A0X1KG70 313 aa16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 SSX4O60224 188 aa16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 CFPP27918 469 aa16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 CASRP41180 1078 aa16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 NR4A2P43354 598 aa16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 SOX2P48431 317 aa16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 PITPNBP48739 271 aa16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 OC90Q02509 493 aaPredicted RBP16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 TAB1Q15750 504 aa16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 STPG1Q5TH74 334 aa16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 ABHD17BQ5VST6 288 aa16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 PYHIN1Q6K0P9 492 aa16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 BAIAP2L2Q6UXY1 529 aa16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 CREB3L2Q70SY1 520 aa16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 SPATC1Q76KD6 591 aa16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 NRARPQ7Z6K4 114 aa16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 OR4M2Q8NGB6 313 aa16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 OR51A4Q8NGJ6 313 aa16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 OR14L1PQ8NHC6 308 aa16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 NKD1Q969G9 470 aa16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 TMEM106AQ96A25 262 aa16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 SMAD5Q99717 465 aaKnown RBP16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 ZFP64Q9NPA5 681 aa16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 LRFN1Q9P244 771 aa16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 RABL2AQ9UBK7 228 aaPredicted RBP16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 BOKQ9UMX3 212 aaPredicted RBP16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 RABL2BQ9UNT1 228 aa16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 SLC22A13Q9Y226 551 aa16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 PCDHGA9Q9Y5G4 932 aaKnown RBP16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 PTPRBP23467 1997 aa16■□□□□ 0.15
HLA-DQB1-201ENST00000374943 TTLL8A6PVC2 850 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 CDK2AP1O14519 115 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 SLC43A1O75387 559 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 NEURL1O76050 574 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 HNRNPCP07910 306 aaKnown RBP eCLIP15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 ADRA2CP18825 462 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 CD96P40200 585 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 CLDN17P56750 224 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 RAC3P60763 192 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 FOXO1Q12778 655 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 UBE2NLQ5JXB2 153 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 RHOUQ7L0Q8 258 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 YRDCQ86U90 279 aaKnown RBP15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 GGNQ86UU5 652 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 RDH10Q8IZV5 341 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 OR9K2Q8NGE7 335 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 LGALS14Q8TCE9 139 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 TMEM54Q969K7 222 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 SLAMF6Q96DU3 332 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 SF3B5Q9BWJ5 86 aaKnown RBP15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 C1orf198Q9H425 327 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 G6PC2Q9NQR9 355 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 IL17BQ9UHF5 180 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 NCOA6Q14686 2063 aaPredicted RBP15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 A0A0B4J203 849 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 A0A1W2PPL8 197 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 TNFSF11O14788 317 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 PLA2G10O15496 165 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 ISG15P05161 165 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 H2BFMP0C1H6 154 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 RFPL3SP0C7P2 107 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 CALCBP10092 127 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 MMP16P51512 607 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms