RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 TSTD1Q8NFU3 115 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 CADM4Q8NFZ8 388 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 OR10H4Q8NGA5 316 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 OR4N2Q8NGD1 307 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 OR2T27Q8NH04 317 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 OR51A7Q8NH64 312 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 OR14A16Q8NHC5 309 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 ENKURQ8TC29 256 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 RPS4Y2Q8TD47 263 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 SMPDL3BQ92485 455 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 C3orf49Q96BT1 292 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 MRPL48Q96GC5 212 aaKnown RBP4.29□□□□□ -1.72
USP48-202ENST00000374730 SENP5Q96HI0 755 aaPredicted RBP4.29□□□□□ -1.72
USP48-202ENST00000374730 PGLYRP3Q96LB9 341 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 NEDD4LQ96PU5 975 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 TNFRSF13CQ96RJ3 184 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 CNN2Q99439 309 aaKnown RBP4.29□□□□□ -1.72
USP48-202ENST00000374730 DDOQ99489 341 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 MAP3K3Q99759 626 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 TMEM43Q9BTV4 400 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 ELOVL1Q9BW60 279 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 HDHD5Q9BXW7 423 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 NMNAT2Q9BZQ4 307 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 OR51V1Q9H2C8 321 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 HIPK2Q9H2X6 1198 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 RERGLQ9H628 205 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 ERVMER34-1Q9H9K5 563 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 C12orf10Q9HB07 376 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 PDE7BQ9NP56 450 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 RBFOX1Q9NWB1 397 aaKnown RBP4.29□□□□□ -1.72
USP48-202ENST00000374730 PPP1R14DQ9NXH3 145 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 COMMD3Q9UBI1 195 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 RPS6KB2Q9UBS0 482 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 ZNF221Q9UK13 617 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 ERVK-19Q9WJR5 959 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 DTX4Q9Y2E6 619 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 SLC6A5Q9Y345 797 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 ZNF337Q9Y3M9 751 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 LRP12Q9Y561 859 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 MTCH2Q9Y6C9 303 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 ADAMTS9Q9P2N4 1935 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 IGKV1D-42A0A075B6H8 117 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 IGKV3D-11A0A0A0MRZ8 115 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 TMEM272A0A1B0GTI8 110 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 A0A1B0GTQ1 180 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 C2orf92A0A1B0GVN3 265 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 SMIM30A4D0T7 59 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 FRG2CA6NGY1 282 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 TMEM150CB9EJG8 249 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 MCIDASD6RGH6 385 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 E9PI62 339 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 LMO7DNF2Z398 122 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 H3BMH7 237 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 IMPA2O14732 288 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 MBTPS2O43462 519 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 GPRIN2O60269 458 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 REM1O75628 298 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 GATBO75879 557 aaKnown RBP4.28□□□□□ -1.72
USP48-202ENST00000374730 TXNDC12O95881 172 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 WNT1P04628 370 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 KRT8P05787 483 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 MRPL3P09001 348 aaKnown RBP4.28□□□□□ -1.72
USP48-202ENST00000374730 PRKAR1AP10644 381 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 PNMTP11086 282 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 UBL4AP11441 157 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 HIST1H1CP16403 213 aaKnown RBP4.28□□□□□ -1.72
USP48-202ENST00000374730 NPR2P20594 1047 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 HLA-DMAP28067 261 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 PSMB10P40306 273 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 PPICP45877 212 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 RFX3P48380 749 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 GBX2P52951 348 aaPredicted RBP4.28□□□□□ -1.72
USP48-202ENST00000374730 SLC25A1P53007 311 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 GFERP55789 205 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 CLDN20P56880 219 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 PRPS1P60891 318 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 BTG2P78543 158 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 MAT1AQ00266 395 aaKnown RBP4.28□□□□□ -1.72
USP48-202ENST00000374730 CHAF1BQ13112 559 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 SKP2Q13309 424 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 TDGQ13569 410 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 IL18Q14116 193 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 INSL4Q14641 139 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 CDK5R1Q15078 307 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 P2RY14Q15391 338 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 TBRG1Q3YBR2 411 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 CCDC58Q4VC31 144 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 C14orf28Q4W4Y0 310 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 KLHL26Q53HC5 615 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 PIK3CD-AS1Q5SR53 167 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 ATAD3CQ5T2N8 411 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 WBP2NLQ6ICG8 309 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 RPUSD3Q6P087 351 aaKnown RBP4.28□□□□□ -1.72
USP48-202ENST00000374730 SFXN4Q6P4A7 337 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 RPL22L1Q6P5R6 122 aaKnown RBP4.28□□□□□ -1.72
USP48-202ENST00000374730 B3GLCTQ6Y288 498 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 H1FNTQ75WM6 255 aaPredicted RBP4.28□□□□□ -1.72
USP48-202ENST00000374730 NR2C2APQ86WQ0 139 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 SLC35F2Q8IXU6 374 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 TDHQ8IZJ6 230 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms