RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 GALP22466 123 aa13.86□□□□□ -0.19
NIPAL3-204ENST00000374399 GDI2P50395 445 aaKnown RBP13.86□□□□□ -0.19
NIPAL3-204ENST00000374399 TUBA1BP68363 451 aa13.86□□□□□ -0.19
NIPAL3-204ENST00000374399 PLEKHN1Q494U1 663 aaPredicted RBP13.86□□□□□ -0.19
NIPAL3-204ENST00000374399 TUBA1AQ71U36 451 aa13.86□□□□□ -0.19
NIPAL3-204ENST00000374399 SPATC1Q76KD6 591 aa13.86□□□□□ -0.19
NIPAL3-204ENST00000374399 ADGRE4PQ86SQ3 457 aa13.86□□□□□ -0.19
NIPAL3-204ENST00000374399 TUSC5Q8IXB3 177 aa13.86□□□□□ -0.19
NIPAL3-204ENST00000374399 PRSS35Q8N3Z0 413 aa13.86□□□□□ -0.19
NIPAL3-204ENST00000374399 YIPF7Q8N8F6 280 aa13.86□□□□□ -0.19
NIPAL3-204ENST00000374399 KBTBD8Q8NFY9 601 aa13.86□□□□□ -0.19
NIPAL3-204ENST00000374399 ABHD4Q8TB40 342 aa13.86□□□□□ -0.19
NIPAL3-204ENST00000374399 CDADC1Q9BWV3 514 aa13.86□□□□□ -0.19
NIPAL3-204ENST00000374399 SEC61A2Q9H9S3 476 aa13.86□□□□□ -0.19
NIPAL3-204ENST00000374399 IKZF2Q9UKS7 526 aa13.86□□□□□ -0.19
NIPAL3-204ENST00000374399 ZZEF1O43149 2961 aa13.85□□□□□ -0.19
NIPAL3-204ENST00000374399 TAF4O00268 1085 aa13.85□□□□□ -0.19
NIPAL3-204ENST00000374399 AQP7O14520 342 aa13.85□□□□□ -0.19
NIPAL3-204ENST00000374399 RGS9O75916 674 aaPredicted RBP13.85□□□□□ -0.19
NIPAL3-204ENST00000374399 ZFPL1O95159 310 aa13.85□□□□□ -0.19
NIPAL3-204ENST00000374399 SYNGR4O95473 234 aa13.85□□□□□ -0.19
NIPAL3-204ENST00000374399 PNPP00491 289 aa13.85□□□□□ -0.19
NIPAL3-204ENST00000374399 TACSTD2P09758 323 aa13.85□□□□□ -0.19
NIPAL3-204ENST00000374399 CLEC2LP0C7M8 214 aa13.85□□□□□ -0.19
NIPAL3-204ENST00000374399 FDX2Q6P4F2 183 aa13.85□□□□□ -0.19
NIPAL3-204ENST00000374399 CFAP77Q6ZQR2 320 aa13.85□□□□□ -0.19
NIPAL3-204ENST00000374399 RNF133Q8WVZ7 376 aa13.85□□□□□ -0.19
NIPAL3-204ENST00000374399 EXTL1Q92935 676 aa13.85□□□□□ -0.19
NIPAL3-204ENST00000374399 COQ7Q99807 217 aa13.85□□□□□ -0.19
NIPAL3-204ENST00000374399 BARHL1Q9BZE3 327 aa13.85□□□□□ -0.19
NIPAL3-204ENST00000374399 NXF2Q9GZY0 626 aaKnown RBP13.85□□□□□ -0.19
NIPAL3-204ENST00000374399 RNF122Q9H9V4 155 aa13.85□□□□□ -0.19
NIPAL3-204ENST00000374399 PNRC2Q9NPJ4 139 aaKnown RBP13.85□□□□□ -0.19
NIPAL3-204ENST00000374399 MCTS1Q9ULC4 181 aaKnown RBP13.85□□□□□ -0.19
NIPAL3-204ENST00000374399 CAMK2AQ9UQM7 478 aa13.85□□□□□ -0.19
NIPAL3-204ENST00000374399 LRP12Q9Y561 859 aa13.85□□□□□ -0.19
NIPAL3-204ENST00000374399 NCOR2Q9Y618 2525 aa13.85□□□□□ -0.19
NIPAL3-204ENST00000374399 ARHGAP21Q5T5U3 1957 aa13.85□□□□□ -0.19
NIPAL3-204ENST00000374399 CACNA1AO00555 2505 aa13.85□□□□□ -0.19
NIPAL3-204ENST00000374399 TRBV2A0A0J9YWF9 115 aa13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 OR4C45A6NMZ5 311 aa13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 RRP8O43159 456 aaKnown RBP13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 SLC43A1O75387 559 aa13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 CLPXO76031 633 aa13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 NR2C1P13056 603 aa13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 OPRL1P41146 370 aa13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 KIR3DL2P43630 455 aa13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 ALKBH1Q13686 389 aaKnown RBP13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 ENDOGQ14249 297 aaKnown RBP13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 FAM27D1Q5T7N8 215 aa13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 FAM220AQ7Z4H9 259 aa13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 FGD2Q7Z6J4 655 aa13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 OR2G2Q8NGZ5 317 aa13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 PNPLA2Q96AD5 504 aa13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 MYCBPQ99417 103 aaPredicted RBP13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 ULBP2Q9BZM5 246 aa13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 GDF2Q9UK05 429 aaPredicted RBP13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 FBXL3Q9UKT7 428 aa13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 CLEC4AQ9UMR7 237 aa13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 B3GNT3Q9Y2A9 372 aa13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 HSPB2A8KAH6 182 aa13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 ZNF724A8MTY0 619 aa13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 MKRN2OSH3BPM6 223 aa13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 INHBBP09529 407 aa13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 ID4P47928 161 aa13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 MFGE8Q08431 387 aaPredicted RBP13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 HSPB2Q16082 182 aa13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 DGUOKQ16854 277 aa13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 OR7E24Q6IFN5 339 aa13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 RPUSD3Q6P087 351 aaKnown RBP13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 SNRNP27Q8WVK2 155 aaKnown RBP13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 PPP1R14AQ96A00 147 aa13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 KCTD7Q96MP8 289 aa13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 ALKBH3Q96Q83 286 aaPredicted RBP13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 ZNF416Q9BWM5 594 aa13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 RBM24Q9BX46 236 aaKnown RBP13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 MROQ9BYG7 248 aa13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 CCDC59Q9P031 241 aaKnown RBP13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 TP53TG5Q9Y2B4 290 aa13.84□□□□□ -0.19
NIPAL3-204ENST00000374399 GPR171O14626 319 aa13.83□□□□□ -0.2
NIPAL3-204ENST00000374399 CDRT1O95170 752 aa13.83□□□□□ -0.2
NIPAL3-204ENST00000374399 SDC2P34741 201 aa13.83□□□□□ -0.2
NIPAL3-204ENST00000374399 LSM6P62312 80 aaKnown RBP13.83□□□□□ -0.2
NIPAL3-204ENST00000374399 MRPL28Q13084 256 aaKnown RBP13.83□□□□□ -0.2
NIPAL3-204ENST00000374399 WDR38Q5JTN6 314 aa13.83□□□□□ -0.2
NIPAL3-204ENST00000374399 TSPO2Q5TGU0 170 aa13.83□□□□□ -0.2
NIPAL3-204ENST00000374399 KCTD18Q6PI47 426 aaPredicted RBP13.83□□□□□ -0.2
NIPAL3-204ENST00000374399 UNQ9370/PRO34162Q6UXP9 181 aa13.83□□□□□ -0.2
NIPAL3-204ENST00000374399 KRT77Q7Z794 578 aa13.83□□□□□ -0.2
NIPAL3-204ENST00000374399 MS4A15Q8N5U1 240 aa13.83□□□□□ -0.2
NIPAL3-204ENST00000374399 IL17RDQ8NFM7 739 aa13.83□□□□□ -0.2
NIPAL3-204ENST00000374399 OR10H5Q8NGA6 315 aa13.83□□□□□ -0.2
NIPAL3-204ENST00000374399 SLAMF6Q96DU3 332 aa13.83□□□□□ -0.2
NIPAL3-204ENST00000374399 C4orf45Q96LM5 186 aa13.83□□□□□ -0.2
NIPAL3-204ENST00000374399 MED18Q9BUE0 208 aa13.83□□□□□ -0.2
NIPAL3-204ENST00000374399 NELFAQ9H3P2 528 aa13.83□□□□□ -0.2
NIPAL3-204ENST00000374399 CALHM2Q9HA72 323 aa13.83□□□□□ -0.2
NIPAL3-204ENST00000374399 SIAEQ9HAT2 523 aa13.83□□□□□ -0.2
NIPAL3-204ENST00000374399 CRLF2Q9HC73 371 aa13.83□□□□□ -0.2
NIPAL3-204ENST00000374399 CLCF1Q9UBD9 225 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms