RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 LINC00614P0C842 121 aa8.65□□□□□ -1.03
SF3A3-201ENST00000373019 PPP2R1BP30154 601 aa8.65□□□□□ -1.03
SF3A3-201ENST00000373019 PTGER1P34995 402 aa8.65□□□□□ -1.03
SF3A3-201ENST00000373019 DHPSP49366 369 aaPredicted RBP8.65□□□□□ -1.03
SF3A3-201ENST00000373019 RGS19P49795 217 aa8.65□□□□□ -1.03
SF3A3-201ENST00000373019 ELOBQ15370 118 aa8.65□□□□□ -1.03
SF3A3-201ENST00000373019 HIST2H3PS2Q5TEC6 136 aa8.65□□□□□ -1.03
SF3A3-201ENST00000373019 ZNF343Q6P1L6 599 aa8.65□□□□□ -1.03
SF3A3-201ENST00000373019 ZNF836Q6ZNA1 936 aa8.65□□□□□ -1.03
SF3A3-201ENST00000373019 Q6ZRG5 221 aa8.65□□□□□ -1.03
SF3A3-201ENST00000373019 SLC25A42Q86VD7 318 aa8.65□□□□□ -1.03
SF3A3-201ENST00000373019 CBARPQ8N350 705 aaPredicted RBP8.65□□□□□ -1.03
SF3A3-201ENST00000373019 SUN3Q8TAQ9 357 aa8.65□□□□□ -1.03
SF3A3-201ENST00000373019 SLC41A3Q96GZ6 507 aa8.65□□□□□ -1.03
SF3A3-201ENST00000373019 GNRHR2Q96P88 292 aa8.65□□□□□ -1.03
SF3A3-201ENST00000373019 SLC5A7Q9GZV3 580 aa8.65□□□□□ -1.03
SF3A3-201ENST00000373019 SLCO1B1Q9Y6L6 691 aa8.65□□□□□ -1.03
SF3A3-201ENST00000373019 NUP210LQ5VU65 1888 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 SCN5AQ14524 2016 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 TVP23AA6NH52 213 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 RTCAO00442 366 aaKnown RBP8.64□□□□□ -1.03
SF3A3-201ENST00000373019 AMY2AP04746 511 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 PRSS3P35030 304 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 SLC10A1Q14973 349 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 SHHQ15465 462 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 SAPCD1Q5SSQ6 148 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 RPL7L1Q6DKI1 246 aaKnown RBP8.64□□□□□ -1.03
SF3A3-201ENST00000373019 SZRD1Q7Z422 152 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 LILRA3Q8N6C8 439 aaPredicted RBP8.64□□□□□ -1.03
SF3A3-201ENST00000373019 OR7G2Q8NG99 324 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 RELTQ969Z4 430 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 SLC6A7Q99884 636 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 POTEKPQ9BYX7 375 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 XIRP2A4UGR9 3374 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 TSPAN11A1L157 253 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 TMEM235A6NFC5 223 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 NPIPB15A6NHN6 443 aaPredicted RBP8.64□□□□□ -1.03
SF3A3-201ENST00000373019 UNC119BA6NIH7 251 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 K7ERQ8 282 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 TXNDC12O95881 172 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 RHOCP08134 193 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 UCP2P55851 309 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 TRA2AQ13595 282 aaKnown RBP eCLIP8.64□□□□□ -1.038e-15■■■■□ 24.4
SF3A3-201ENST00000373019 DCAF10Q5QP82 559 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 RNF219Q5W0B1 726 aaPredicted RBP8.64□□□□□ -1.03
SF3A3-201ENST00000373019 WDR88Q6ZMY6 472 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 TTC9BQ8N6N2 239 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 M1APQ8TC57 530 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 ZMYND19Q96E35 227 aaPredicted RBP8.64□□□□□ -1.03
SF3A3-201ENST00000373019 SEH1LQ96EE3 360 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 SLC35G5Q96KT7 338 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 PRSS27Q9BQR3 290 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 CUTCQ9NTM9 273 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 MARCH5Q9NX47 278 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 OR5AC2Q9NZP5 309 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 CHRNA9Q9UGM1 479 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 IL36AQ9UHA7 158 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 ZNF223Q9UK11 482 aaPredicted RBP8.64□□□□□ -1.03
SF3A3-201ENST00000373019 SLC7A7Q9UM01 511 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 ICAM5Q9UMF0 924 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 YBX2Q9Y2T7 364 aaKnown RBP8.64□□□□□ -1.03
SF3A3-201ENST00000373019 ZNF281Q9Y2X9 895 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 CDH23Q9H251 3354 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 COL4A3Q01955 1670 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 ZNF727A8MUV8 499 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 PLPP1O14494 284 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 SLCO2B1O94956 709 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 GPANK1O95872 356 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 TRGC2P03986 189 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 RAB6AP20340 208 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 TAS2R19P59542 299 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 ERVFRD-1P60508 538 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 RAB1AP62820 205 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 ZNHIT3Q15649 155 aaPredicted RBP8.64□□□□□ -1.03
SF3A3-201ENST00000373019 C14orf28Q4W4Y0 310 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 GLB1LQ6UWU2 654 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 RTL10Q7L3V2 364 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 TAF8Q7Z7C8 310 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 TMPRSS12Q86WS5 348 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 PFN4Q8NHR9 129 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 SLC2A12Q8TD20 617 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 ZNRF4Q8WWF5 429 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 WDR34Q96EX3 536 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 JSRP1Q96MG2 331 aaPredicted RBP8.64□□□□□ -1.03
SF3A3-201ENST00000373019 TAF9BQ9HBM6 251 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 CXXC1Q9P0U4 656 aaPredicted RBP8.64□□□□□ -1.03
SF3A3-201ENST00000373019 TMED7Q9Y3B3 224 aa8.64□□□□□ -1.03
SF3A3-201ENST00000373019 VCANP13611 3396 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 TRAV8-7A0A075B6U6 113 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 PRR32B1ATL7 298 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 GPRIN2O60269 458 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 RAMP1O60894 148 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 ZIC2O95409 532 aaPredicted RBP8.63□□□□□ -1.03
SF3A3-201ENST00000373019 VNN2O95498 520 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 ATP1B2P14415 290 aaPredicted RBP8.63□□□□□ -1.03
SF3A3-201ENST00000373019 FGF7P21781 194 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 HTR2CP28335 458 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 HNF4GQ14541 408 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 TOMM34Q15785 309 aaPredicted RBP8.63□□□□□ -1.03
SF3A3-201ENST00000373019 ZNF674Q2M3X9 581 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms