RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 SDHAP31040 664 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 BLOC1S1P78537 153 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 CCDC157Q569K6 752 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 ACOT7LQ6ZUV0 252 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 OR13C8Q8NGS7 320 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 GABRG3Q99928 467 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 CCDC3Q9BQI4 270 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 TLNRD1Q9H1K6 362 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 ELOVL3Q9HB03 270 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 FAM60AQ9NP50 221 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 PCOLCE2Q9UKZ9 415 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 SLC17A2O00624 439 aa13.35□□□□□ -0.27
COL9A2-202ENST00000372748 KCNJ3P48549 501 aa13.35□□□□□ -0.27
COL9A2-202ENST00000372748 ZNF345Q14585 488 aa13.35□□□□□ -0.27
COL9A2-202ENST00000372748 MEP1BQ16820 701 aa13.35□□□□□ -0.27
COL9A2-202ENST00000372748 KCTD9Q7L273 389 aa13.35□□□□□ -0.27
COL9A2-202ENST00000372748 RAB11FIP2Q7L804 512 aa13.35□□□□□ -0.27
COL9A2-202ENST00000372748 BAHD1Q8TBE0 780 aaPredicted RBP13.35□□□□□ -0.27
COL9A2-202ENST00000372748 PMM1Q92871 262 aa13.35□□□□□ -0.27
COL9A2-202ENST00000372748 FAM131CQ96AQ9 280 aa13.35□□□□□ -0.27
COL9A2-202ENST00000372748 MRGPRX1Q96LB2 322 aa13.35□□□□□ -0.27
COL9A2-202ENST00000372748 DCBLD2Q96PD2 775 aa13.35□□□□□ -0.27
COL9A2-202ENST00000372748 LPAR4Q99677 370 aa13.35□□□□□ -0.27
COL9A2-202ENST00000372748 SLC25A21Q9BQT8 299 aaPredicted RBP13.35□□□□□ -0.27
COL9A2-202ENST00000372748 MBD2Q9UBB5 411 aa13.35□□□□□ -0.27
COL9A2-202ENST00000372748 KCNK7Q9Y2U2 307 aa13.35□□□□□ -0.27
COL9A2-202ENST00000372748 EPOPA6NHQ4 379 aa13.35□□□□□ -0.27
COL9A2-202ENST00000372748 PNPP00491 289 aa13.35□□□□□ -0.27
COL9A2-202ENST00000372748 H2AFB1P0C5Y9 115 aa13.35□□□□□ -0.27
COL9A2-202ENST00000372748 SLC25A1P53007 311 aa13.35□□□□□ -0.27
COL9A2-202ENST00000372748 SKP1P63208 163 aa13.35□□□□□ -0.27
COL9A2-202ENST00000372748 RPL18Q07020 188 aaKnown RBP13.35□□□□□ -0.27
COL9A2-202ENST00000372748 ZNF74Q16587 644 aa13.35□□□□□ -0.27
COL9A2-202ENST00000372748 PLEKHN1Q494U1 663 aaPredicted RBP13.35□□□□□ -0.27
COL9A2-202ENST00000372748 POMZP3Q6PJE2 187 aa13.35□□□□□ -0.27
COL9A2-202ENST00000372748 PM20D2Q8IYS1 436 aa13.35□□□□□ -0.27
COL9A2-202ENST00000372748 THAP6Q8TBB0 222 aa13.35□□□□□ -0.27
COL9A2-202ENST00000372748 TSPAN32Q96QS1 320 aa13.35□□□□□ -0.27
COL9A2-202ENST00000372748 KLHDC3Q9BQ90 382 aa13.35□□□□□ -0.27
COL9A2-202ENST00000372748 VSIG4Q9Y279 399 aa13.35□□□□□ -0.27
COL9A2-202ENST00000372748 SERINC4A6NH21 518 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 C2orf74A8MZ97 194 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 OIP5O43482 229 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 ZNF735P0CB33 412 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 PRKXP51817 358 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 SCAND1P57086 179 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 PPP1R1AQ13522 171 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 ISXQ2M1V0 245 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 H3F3CQ6NXT2 135 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 CBLN3Q6UW01 205 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 Q6ZSR6 202 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 ELSPBP1Q96BH3 223 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 ZNF524Q96C55 264 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 RBM18Q96H35 190 aaKnown RBP13.34□□□□□ -0.27
COL9A2-202ENST00000372748 GPX7Q96SL4 187 aaPredicted RBP13.34□□□□□ -0.27
COL9A2-202ENST00000372748 GAS2L1Q99501 681 aaPredicted RBP13.34□□□□□ -0.27
COL9A2-202ENST00000372748 CST11Q9H112 138 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 COA4Q9NYJ1 87 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 MKL2Q9ULH7 1088 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 HIF3AQ9Y2N7 669 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 CCDC85CA6NKD9 419 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 SULT2B1O00204 365 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 ZNF432O94892 652 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 SPP1P10451 314 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 HNRNPA2B1P22626 353 aaKnown RBP13.34□□□□□ -0.27
COL9A2-202ENST00000372748 VAMP1P23763 118 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 RASGEF1BQ0VAM2 473 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 C1orf61Q13536 156 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 ZNF141Q15928 474 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 SLC22A6Q4U2R8 563 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 GTPBP8Q8N3Z3 284 aaPredicted RBP13.34□□□□□ -0.27
COL9A2-202ENST00000372748 LRRC75AQ8NAA5 344 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 TMEM229BQ8NBD8 167 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 INO80EQ8NBZ0 244 aaPredicted RBP13.34□□□□□ -0.27
COL9A2-202ENST00000372748 OR51A2Q8NGJ7 313 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 ASB13Q8WXK3 278 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 VSTM2LQ96N03 204 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 INTS14Q96SY0 518 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 CMKLR1Q99788 373 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 MTIF3Q9H2K0 278 aaKnown RBP13.34□□□□□ -0.27
COL9A2-202ENST00000372748 KLK13Q9UKR3 277 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 TMED7Q9Y3B3 224 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 MRPS18BQ9Y676 258 aaKnown RBP13.34□□□□□ -0.27
COL9A2-202ENST00000372748 ARID1AO14497 2285 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 CPED1A4D0V7 1026 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 TMEM200CA6NKL6 621 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 EFCAB7A8K855 629 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 TGFBR3LH3BV60 316 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 SULT1C2O00338 296 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 APBB3O95704 486 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 SLC35E2P0CK97 266 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 NPBWR1P48145 328 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 CXADRP78310 365 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 INPP5JQ15735 1006 aaPredicted RBP13.34□□□□□ -0.27
COL9A2-202ENST00000372748 ZNF528Q3MIS6 628 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 CORO6Q6QEF8 472 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 MDGA2Q7Z553 956 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 KTI12Q96EK9 354 aaPredicted RBP13.34□□□□□ -0.27
COL9A2-202ENST00000372748 MMP25Q9NPA2 562 aa13.34□□□□□ -0.27
COL9A2-202ENST00000372748 TAS2R4Q9NYW5 299 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms