RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 SH2B3Q9UQQ2 575 aa8.02□□□□□ -1.13
ATG4A-203ENST00000372232 MGAT4DA6NG13 374 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 C9J4A7 227 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 F8VVB4 439 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 F8VWA3 439 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 J3KTA2 159 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 DVL1O14640 695 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 PGRMC2O15173 223 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 MAGEB4O15481 346 aaPredicted RBP8.01□□□□□ -1.13
ATG4A-203ENST00000372232 CA11O75493 328 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 PCDH8O95206 1070 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 IGFBP1P08833 259 aaPredicted RBP8.01□□□□□ -1.13
ATG4A-203ENST00000372232 OR12D1P0DN82 309 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 RAB6AP20340 208 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 HTR2CP28335 458 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 TIA1P31483 386 aaKnown RBP eCLIP8.01□□□□□ -1.13
ATG4A-203ENST00000372232 SERPINF1P36955 418 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 OR1E2P47887 323 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 DGKEP52429 567 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 OR10A3P58181 314 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 SRSF4Q08170 494 aaKnown RBP8.01□□□□□ -1.13
ATG4A-203ENST00000372232 CNTN1Q12860 1018 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 ZNF234Q14588 700 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 TMEM52BQ4KMG9 183 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 SMARCD3Q6STE5 483 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 DHRS11Q6UWP2 260 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 FOXRED2Q8IWF2 684 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 LMNTD1Q8N9Z9 388 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 ACBD4Q8NC06 268 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 SLC30A7Q8NEW0 376 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 TERB2Q8NHR7 220 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 ZNF417Q8TAU3 575 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 MRGPRDQ8TDS7 321 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 HPSE2Q8WWQ2 592 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 PPP1R16AQ96I34 528 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 C5orf34Q96MH7 638 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 ZNF587Q96SQ5 575 aaPredicted RBP8.01□□□□□ -1.13
ATG4A-203ENST00000372232 EFCAB11Q9BUY7 163 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 GPR34Q9UPC5 381 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 CEP290O15078 2479 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 RANBP2P49792 3224 aaKnown RBP8.01□□□□□ -1.13
ATG4A-203ENST00000372232 TCRBV21S2A2A0A5A6 115 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 ANKRD20A5PA0PJZ0 165 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 C1orf226A1L170 272 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 GSAPA4D1B5 854 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 GABARAPH6UMI1 98 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 PYCARD-AS1I3L0S3 204 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 NARSO43776 548 aaKnown RBP8.01□□□□□ -1.13
ATG4A-203ENST00000372232 SOX14O95416 240 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 FAM157CP0CG43 387 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 DHPSP49366 369 aaPredicted RBP8.01□□□□□ -1.13
ATG4A-203ENST00000372232 ZNF84P51523 738 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 TSTA3Q13630 321 aaPredicted RBP8.01□□□□□ -1.13
ATG4A-203ENST00000372232 HAGHQ16775 308 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 C1orf185Q5T7R7 199 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 OR2A2Q6IF42 318 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 ERN2Q76MJ5 926 aaKnown RBP8.01□□□□□ -1.13
ATG4A-203ENST00000372232 SMIM15Q7Z3B0 74 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 ZNF573Q86YE8 665 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 MUC20Q8N307 709 aaPredicted RBP8.01□□□□□ -1.13
ATG4A-203ENST00000372232 NUBPLQ8TB37 319 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 ADAMTS18Q8TE60 1221 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 NANOS1Q8WY41 292 aaKnown RBP8.01□□□□□ -1.13
ATG4A-203ENST00000372232 SMARCD2Q92925 531 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 ADGRG7Q96K78 797 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 HSPA12BQ96MM6 686 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 ACTR3CQ9C0K3 210 aaPredicted RBP8.01□□□□□ -1.13
ATG4A-203ENST00000372232 DPEP2Q9H4A9 486 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 AP5S1Q9NUS5 200 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 TVP23BQ9NYZ1 205 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 ABRACLQ9P1F3 81 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 PTGFRNQ9P2B2 879 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 CHRNA9Q9UGM1 479 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 POMT1Q9Y6A1 747 aa8.01□□□□□ -1.13
ATG4A-203ENST00000372232 TMEM269A0A1B0GVZ9 245 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 F5H0A9 414 aaPredicted RBP8□□□□□ -1.13
ATG4A-203ENST00000372232 RNF13O43567 381 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 ATP1B1P05026 303 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 CD14P08571 375 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 SNRNP70P08621 437 aaKnown RBP8□□□□□ -1.13
ATG4A-203ENST00000372232 UCHL1P09936 223 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 TMIGD3P0DMS9 266 aaPredicted RBP8□□□□□ -1.13
ATG4A-203ENST00000372232 AQP1P29972 269 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 CASRP41180 1078 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 NAAAQ02083 359 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 BDH1Q02338 343 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 TLE4Q04727 773 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 ODF4Q2M2E3 257 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 SLC25A35Q3KQZ1 300 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 ABLIM2Q6H8Q1 611 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 C11orf87Q6NUJ2 197 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 LINGO2Q7L985 606 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 SZRD1Q7Z422 152 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 COMMD6Q7Z4G1 85 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 CD163Q86VB7 1156 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 CPOQ8IVL8 374 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 OR5AP2Q8NGF4 316 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 OR2L2Q8NH16 312 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 RNASEH2CQ8TDP1 164 aaKnown RBP8□□□□□ -1.13
ATG4A-203ENST00000372232 HMGB4Q8WW32 186 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms