RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 PCBD1P61457 104 aa13.57□□□□□ -0.24
CKS1B-202ENST00000368436 PPP1CBP62140 327 aa13.57□□□□□ -0.24
CKS1B-202ENST00000368436 SLC3A1Q07837 685 aa13.57□□□□□ -0.24
CKS1B-202ENST00000368436 ENDOGQ14249 297 aaKnown RBP13.57□□□□□ -0.24
CKS1B-202ENST00000368436 ANKDD1AQ495B1 522 aa13.57□□□□□ -0.24
CKS1B-202ENST00000368436 LRRC23Q53EV4 343 aaPredicted RBP13.57□□□□□ -0.24
CKS1B-202ENST00000368436 DCAF12L2Q5VW00 463 aa13.57□□□□□ -0.24
CKS1B-202ENST00000368436 FAM205BPQ63HN1 556 aa13.57□□□□□ -0.24
CKS1B-202ENST00000368436 SYT9Q86SS6 491 aa13.57□□□□□ -0.24
CKS1B-202ENST00000368436 ABHD4Q8TB40 342 aa13.57□□□□□ -0.24
CKS1B-202ENST00000368436 TPD52L3Q96J77 140 aa13.57□□□□□ -0.24
CKS1B-202ENST00000368436 JMJD8Q96S16 334 aa13.57□□□□□ -0.24
CKS1B-202ENST00000368436 DIRC2Q96SL1 478 aa13.57□□□□□ -0.24
CKS1B-202ENST00000368436 WACQ9BTA9 647 aa13.57□□□□□ -0.24
CKS1B-202ENST00000368436 PLA2G12AQ9BZM1 189 aa13.57□□□□□ -0.24
CKS1B-202ENST00000368436 SAR1AQ9NR31 198 aa13.57□□□□□ -0.24
CKS1B-202ENST00000368436 FSHBP01225 129 aa13.56□□□□□ -0.24
CKS1B-202ENST00000368436 IFNA8P32881 189 aa13.56□□□□□ -0.24
CKS1B-202ENST00000368436 ACTG1P63261 375 aa13.56□□□□□ -0.24
CKS1B-202ENST00000368436 PRKCDQ05655 676 aa13.56□□□□□ -0.24
CKS1B-202ENST00000368436 MAPRE2Q15555 327 aa13.56□□□□□ -0.24
CKS1B-202ENST00000368436 SPRNQ5BIV9 151 aa13.56□□□□□ -0.24
CKS1B-202ENST00000368436 ZNF774Q6NX45 483 aa13.56□□□□□ -0.24
CKS1B-202ENST00000368436 IGFN1Q86VF2 1251 aa13.56□□□□□ -0.24
CKS1B-202ENST00000368436 MICU2Q8IYU8 434 aa13.56□□□□□ -0.24
CKS1B-202ENST00000368436 OR2T12Q8NG77 320 aa13.56□□□□□ -0.24
CKS1B-202ENST00000368436 NANPQ8TBE9 248 aa13.56□□□□□ -0.24
CKS1B-202ENST00000368436 C4orf45Q96LM5 186 aa13.56□□□□□ -0.24
CKS1B-202ENST00000368436 GAL3ST1Q99999 423 aa13.56□□□□□ -0.24
CKS1B-202ENST00000368436 RBM4Q9BWF3 364 aaKnown RBP13.56□□□□□ -0.24
CKS1B-202ENST00000368436 SUCNR1Q9BXA5 334 aa13.56□□□□□ -0.24
CKS1B-202ENST00000368436 ELOVL3Q9HB03 270 aa13.56□□□□□ -0.24
CKS1B-202ENST00000368436 MAN2C1Q9NTJ4 1040 aa13.56□□□□□ -0.24
CKS1B-202ENST00000368436 GID8Q9NWU2 228 aa13.56□□□□□ -0.24
CKS1B-202ENST00000368436 OPN4Q9UHM6 478 aa13.56□□□□□ -0.24
CKS1B-202ENST00000368436 LOC100653049A0A140TA62 436 aa13.55□□□□□ -0.24
CKS1B-202ENST00000368436 A6NIZ1 184 aa13.55□□□□□ -0.24
CKS1B-202ENST00000368436 C12orf71A8MTZ7 269 aa13.55□□□□□ -0.24
CKS1B-202ENST00000368436 KRT34O76011 436 aa13.55□□□□□ -0.24
CKS1B-202ENST00000368436 SCG5P05408 212 aa13.55□□□□□ -0.24
CKS1B-202ENST00000368436 ADRA2CP18825 462 aa13.55□□□□□ -0.24
CKS1B-202ENST00000368436 MSR1P21757 451 aa13.55□□□□□ -0.24
CKS1B-202ENST00000368436 GUCA1AP43080 201 aaPredicted RBP13.55□□□□□ -0.24
CKS1B-202ENST00000368436 LIMS1P48059 325 aa13.55□□□□□ -0.24
CKS1B-202ENST00000368436 ARHGDIAP52565 204 aa13.55□□□□□ -0.24
CKS1B-202ENST00000368436 RAP1BP61224 184 aa13.55□□□□□ -0.24
CKS1B-202ENST00000368436 RAP1AP62834 184 aa13.55□□□□□ -0.24
CKS1B-202ENST00000368436 PSG7Q13046 419 aa13.55□□□□□ -0.24
CKS1B-202ENST00000368436 CDK5R2Q13319 367 aa13.55□□□□□ -0.24
CKS1B-202ENST00000368436 ZMAT1Q5H9K5 638 aa13.55□□□□□ -0.24
CKS1B-202ENST00000368436 NRMQ8IXM6 262 aa13.55□□□□□ -0.24
CKS1B-202ENST00000368436 OFCC1Q8IZS5 231 aa13.55□□□□□ -0.24
CKS1B-202ENST00000368436 PCYOX1LQ8NBM8 494 aa13.55□□□□□ -0.24
CKS1B-202ENST00000368436 OR51A7Q8NH64 312 aa13.55□□□□□ -0.24
CKS1B-202ENST00000368436 GEMIN6Q8WXD5 167 aaKnown RBP13.55□□□□□ -0.24
CKS1B-202ENST00000368436 GCDHQ92947 438 aaPredicted RBP13.55□□□□□ -0.24
CKS1B-202ENST00000368436 C7orf69Q9H7B7 122 aa13.55□□□□□ -0.24
CKS1B-202ENST00000368436 MSL2Q9HCI7 577 aa13.55□□□□□ -0.24
CKS1B-202ENST00000368436 POLE4Q9NR33 117 aa13.55□□□□□ -0.24
CKS1B-202ENST00000368436 TBCCD1Q9NVR7 557 aa13.55□□□□□ -0.24
CKS1B-202ENST00000368436 SNX13Q9Y5W8 968 aa13.55□□□□□ -0.24
CKS1B-202ENST00000368436 PPIAL4EA0A075B759 164 aa13.54□□□□□ -0.24
CKS1B-202ENST00000368436 TRAV27A0A087WT01 109 aa13.54□□□□□ -0.24
CKS1B-202ENST00000368436 PPIAL4CA0A0B4J2A2 164 aa13.54□□□□□ -0.24
CKS1B-202ENST00000368436 A0A1W2PPL8 197 aa13.54□□□□□ -0.24
CKS1B-202ENST00000368436 ELOVL7A1L3X0 281 aa13.54□□□□□ -0.24
CKS1B-202ENST00000368436 PPIAL4DF5H284 164 aa13.54□□□□□ -0.24
CKS1B-202ENST00000368436 FFAR1O14842 300 aa13.54□□□□□ -0.24
CKS1B-202ENST00000368436 PPIAL4FP0DN26 164 aa13.54□□□□□ -0.24
CKS1B-202ENST00000368436 COX5BP10606 129 aa13.54□□□□□ -0.24
CKS1B-202ENST00000368436 TUBG1P23258 451 aa13.54□□□□□ -0.24
CKS1B-202ENST00000368436 YAP1P46937 504 aaKnown RBP13.54□□□□□ -0.24
CKS1B-202ENST00000368436 SLC9A3P48764 834 aa13.54□□□□□ -0.24
CKS1B-202ENST00000368436 TRAM2Q15035 370 aa13.54□□□□□ -0.24
CKS1B-202ENST00000368436 MTX3Q5HYI7 312 aa13.54□□□□□ -0.24
CKS1B-202ENST00000368436 ARL9Q6T311 187 aa13.54□□□□□ -0.24
CKS1B-202ENST00000368436 OAFQ86UD1 273 aa13.54□□□□□ -0.24
CKS1B-202ENST00000368436 RNF113BQ8IZP6 322 aaKnown RBP13.54□□□□□ -0.24
CKS1B-202ENST00000368436 FAM156AQ8NDB6 213 aa13.54□□□□□ -0.24
CKS1B-202ENST00000368436 LZICQ8WZA0 190 aa13.54□□□□□ -0.24
CKS1B-202ENST00000368436 SLC6A7Q99884 636 aa13.54□□□□□ -0.24
CKS1B-202ENST00000368436 TUBG2Q9NRH3 451 aa13.54□□□□□ -0.24
CKS1B-202ENST00000368436 RHCGQ9UBD6 479 aa13.54□□□□□ -0.24
CKS1B-202ENST00000368436 NDRG4Q9ULP0 352 aaKnown RBP13.54□□□□□ -0.24
CKS1B-202ENST00000368436 NPTNQ9Y639 398 aa13.54□□□□□ -0.24
CKS1B-202ENST00000368436 ISPDA4D126 451 aa13.53□□□□□ -0.24
CKS1B-202ENST00000368436 EFCAB9A8MZ26 197 aa13.53□□□□□ -0.24
CKS1B-202ENST00000368436 J3KTA2 159 aa13.53□□□□□ -0.24
CKS1B-202ENST00000368436 AHCYL1O43865 530 aa13.53□□□□□ -0.24
CKS1B-202ENST00000368436 FOXH1O75593 365 aa13.53□□□□□ -0.24
CKS1B-202ENST00000368436 IGHV2-70P01814 119 aa13.53□□□□□ -0.24
CKS1B-202ENST00000368436 TROVE2P10155 538 aaKnown RBP eCLIP13.53□□□□□ -0.24
CKS1B-202ENST00000368436 ZFP36P26651 326 aaKnown RBP13.53□□□□□ -0.24
CKS1B-202ENST00000368436 LCN2P80188 198 aa13.53□□□□□ -0.24
CKS1B-202ENST00000368436 TNFAIP6P98066 277 aaPredicted RBP13.53□□□□□ -0.24
CKS1B-202ENST00000368436 TUSC1Q2TAM9 212 aa13.53□□□□□ -0.24
CKS1B-202ENST00000368436 CGB2Q6NT52 195 aa13.53□□□□□ -0.24
CKS1B-202ENST00000368436 TMPRSS11FQ6ZWK6 438 aa13.53□□□□□ -0.24
CKS1B-202ENST00000368436 VTCN1Q7Z7D3 282 aa13.53□□□□□ -0.24
CKS1B-202ENST00000368436 ZER1Q7Z7L7 766 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms