RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 A0A1B0GW55 424 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 SMCO3A2RU48 225 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 K7EMT4 169 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 NUPL2O15504 423 aaKnown RBP2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 OR2F2O95006 317 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 GABARAPO95166 117 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 H6PDO95479 791 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 DUX4L2P0CJ85 424 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 DUX4L3P0CJ86 424 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 DUX4L5P0CJ88 424 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 DUX4L6P0CJ89 424 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 DUX4L7P0CJ90 424 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 OR5H8P0DN80 308 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 CEACAM6P40199 344 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 PRRX1P54821 245 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 RPS15P62841 145 aaKnown RBP2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 GBE1Q04446 702 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 PON2Q15165 354 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 RCN1Q15293 331 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 SHHQ15465 462 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 RGNQ15493 299 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 CCNJQ5T5M9 372 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 C9orf135Q5VTT2 229 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 FBXW12Q6X9E4 464 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 SLC16A14Q7RTX9 510 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 HDDC2Q7Z4H3 204 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 ZNF695Q8IW36 515 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 IQCKQ8N0W5 287 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 CARMIL3Q8ND23 1372 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 DOCK8Q8NF50 2099 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 CCDC148Q8NFR7 591 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 OR10G4Q8NGN3 311 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 NUBPLQ8TB37 319 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 SLC38A4Q969I6 547 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 ZNF578Q96N58 590 aaPredicted RBP2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 TSNARE1Q96NA8 513 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 PLIN2Q99541 437 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 C20orf24Q9BUV8 137 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 BEX1Q9HBH7 125 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 WFDC1Q9HC57 220 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 TMEM9BQ9NQ34 198 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 DUX4Q9UBX2 424 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 OR12D3Q9UGF7 316 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 ZNF222Q9UK12 451 aa2.04□□□□□ -2.08
ECHDC1-201ENST00000368287 TSPOAP1O95153 1857 aa2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 GPATCH8Q9UKJ3 1502 aaKnown RBP2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 AKNAQ7Z591 1439 aa2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 INSRP06213 1382 aa2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 IGHV3-74A0A0B4J1X5 117 aa2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 TRBV11-1A0A0K0K1C0 115 aa2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 SGK1O00141 431 aa2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 EIF4E2O60573 245 aaKnown RBP2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 DNAJB6O75190 326 aa2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 CDH16O75309 829 aa2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 WBP4O75554 376 aaKnown RBP2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 BCHEP06276 602 aa2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 IGFBP3P17936 291 aaPredicted RBP2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 CSNK1EP49674 416 aaKnown RBP2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 RAB10P61026 200 aa2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 LIPEQ05469 1076 aa2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 STK11Q15831 433 aa2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 C22orf42Q6IC83 251 aa2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 TMEM205Q6UW68 189 aa2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 CERS6Q6ZMG9 384 aa2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 MBOAT1Q6ZNC8 495 aa2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 ABHD13Q7L211 337 aa2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 PEX26Q7Z412 305 aa2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 OFCC1Q8IZS5 231 aa2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 OR10AD1Q8NGE0 317 aa2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 OR5W2Q8NH69 310 aa2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 LKAAEAR1Q8TD35 194 aa2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 CREB3L1Q96BA8 519 aa2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 PRRC1Q96M27 445 aa2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 GEMIN7Q9H840 131 aaKnown RBP2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 ZDHHC4Q9NPG8 344 aa2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 GPATCH2LQ9NWQ4 482 aa2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 HRASLS2Q9NWW9 162 aa2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 GCNT4Q9P109 453 aa2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 UXTQ9UBK9 157 aaPredicted RBP2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 LGALS13Q9UHV8 139 aa2.03□□□□□ -2.08
ECHDC1-201ENST00000368287 SLIT3O75094 1523 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 MROH7-TTC4A0A0A0MT08 1334 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 PHLPP2Q6ZVD8 1323 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 IGSF9BQ9UPX0 1349 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 A0A075B6Q4 140 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 TRBV9A0A0B4J1U6 114 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 A0A1W2PQ67 120 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 L7N2F9 121 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 SIRPB1O00241 398 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 KLHL41O60662 606 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 FKBP6O75344 327 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 CLDN11O75508 207 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 RAB3DO95716 219 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 AGTP01019 485 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 EIF4EP06730 217 aaKnown RBP2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 SERPINE2P07093 398 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 PGAM1P18669 254 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 GGT1P19440 569 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 BCKDHBP21953 392 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 RRM2P31350 389 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms