RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 ITPKCQ96DU7 683 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 SMAD5Q99717 465 aaKnown RBP9.72□□□□□ -0.85
H3F3A-202ENST00000366814 NEURL2Q9BR09 285 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 ZCCHC4Q9H5U6 513 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 TMEM185BQ9H7F4 350 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 ELOVL3Q9HB03 270 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 MRPL22Q9NWU5 206 aaKnown RBP9.72□□□□□ -0.85
H3F3A-202ENST00000366814 SLCO1C1Q9NYB5 712 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 FRRS1LQ9P0K9 344 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 AK6Q9Y3D8 172 aaKnown RBP9.72□□□□□ -0.85
H3F3A-202ENST00000366814 PIEZO2Q9H5I5 2752 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 COL6A6A6NMZ7 2263 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 LINC00854A0A1B0GVQ3 168 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 ACOD1A6NK06 481 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 SULT2B1O00204 365 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 ZNF254O75437 659 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 AQP8O94778 261 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 IGHG1P01857 330 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 HRGP04196 525 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 P04436 131 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 FAM87AP0C7U9 286 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 SFTPDP35247 375 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 RPS27P42677 84 aaKnown RBP9.72□□□□□ -0.85
H3F3A-202ENST00000366814 NR4A2P43354 598 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 BIDP55957 195 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 CLRN1P58418 232 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 ROM1Q03395 351 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 P2RY14Q15391 338 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 DEFB109BQ30KR1 87 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 SLC25A35Q3KQZ1 300 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 THEM4Q5T1C6 240 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 LRRN1Q6UXK5 716 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 PPP1R32Q7Z5V6 425 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 NRARPQ7Z6K4 114 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 RAB43Q86YS6 212 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 ZNF433Q8N7K0 673 aaPredicted RBP9.72□□□□□ -0.85
H3F3A-202ENST00000366814 OR52N5Q8NH56 324 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 TSEN15Q8WW01 171 aaKnown RBP9.72□□□□□ -0.85
H3F3A-202ENST00000366814 MAP6Q96JE9 813 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 JSRP1Q96MG2 331 aaPredicted RBP9.72□□□□□ -0.85
H3F3A-202ENST00000366814 MED29Q9NX70 200 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 KLHL9Q9P2J3 617 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 SPATA2Q9UM82 520 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 LOC400499M0QZD8 3231 aa9.72□□□□□ -0.85
H3F3A-202ENST00000366814 TRBV5-5A0A0J9YX44 114 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 A0A1W2PNR3 127 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 OR4C45A6NMZ5 311 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 GJE1A6NN92 205 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 C21orf140B9A014 251 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 AIPO00170 330 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 GPR171O14626 319 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 EFNA2O43921 213 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 CBR3O75828 277 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 EIF4EP06730 217 aaKnown RBP9.71□□□□□ -0.85
H3F3A-202ENST00000366814 CCL3P10147 92 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 SPNP16150 400 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 ZNF17P17021 662 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 ZNF43P17038 809 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 CD97P48960 835 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 MADCAM1Q13477 382 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 INPP5JQ15735 1006 aaPredicted RBP9.71□□□□□ -0.85
H3F3A-202ENST00000366814 TMEM176BQ3YBM2 270 aaPredicted RBP9.71□□□□□ -0.85
H3F3A-202ENST00000366814 CEP78Q5JTW2 689 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 TEX30Q5JUR7 227 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 UBE2NLQ5JXB2 153 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 ATP1A1-AS1Q5TC04 95 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 HACD4Q5VWC8 232 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 RAET1LQ5VY80 246 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 GPAT4Q86UL3 456 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 GLB1L2Q8IW92 636 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 SLC26A10Q8NG04 563 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 OR5M1Q8NGP8 315 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 RNF128Q8TEB7 428 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 HSD17B8Q92506 261 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 MIB2Q96AX9 1013 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 TMEM41AQ96HV5 264 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 TXNDC15Q96J42 360 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 C4orf45Q96LM5 186 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 FOXN4Q96NZ1 517 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 OXGR1Q96P68 337 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 ABHD6Q9BV23 337 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 GPR87Q9BY21 358 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 HDHD2Q9H0R4 259 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 GTF2A1LQ9UNN4 478 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 HRH3Q9Y5N1 445 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 V9GY05 133 aa9.71□□□□□ -0.85
H3F3A-202ENST00000366814 ANXA2P2A6NMY6 339 aa9.7□□□□□ -0.86
H3F3A-202ENST00000366814 ZNF726A6NNF4 738 aa9.7□□□□□ -0.86
H3F3A-202ENST00000366814 BOLA2-SMG1P6H3BVE0 249 aa9.7□□□□□ -0.86
H3F3A-202ENST00000366814 EIF1BO60739 113 aaKnown RBP9.7□□□□□ -0.86
H3F3A-202ENST00000366814 PMS2P2O95744 297 aa9.7□□□□□ -0.86
H3F3A-202ENST00000366814 ANXA2P07355 339 aaKnown RBP9.7□□□□□ -0.86
H3F3A-202ENST00000366814 SFTPCP11686 197 aa9.7□□□□□ -0.86
H3F3A-202ENST00000366814 ATF1P18846 271 aa9.7□□□□□ -0.86
H3F3A-202ENST00000366814 PTGS2P35354 604 aa9.7□□□□□ -0.86
H3F3A-202ENST00000366814 GPR85P60893 370 aa9.7□□□□□ -0.86
H3F3A-202ENST00000366814 RPS18P62269 152 aaKnown RBP9.7□□□□□ -0.86
H3F3A-202ENST00000366814 CSNK2A1P68400 391 aaPredicted RBP9.7□□□□□ -0.86
H3F3A-202ENST00000366814 ETFDHQ16134 617 aa9.7□□□□□ -0.86
H3F3A-202ENST00000366814 ZNF239Q16600 458 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms