RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 Q6ZSR6 202 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 OR5D18Q8NGL1 313 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 OR1S2Q8NGQ3 325 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 ABHD1Q96SE0 405 aa12.75□□□□□ -0.37
SMC5-201ENST00000361138 KIR2DS5A0A0G2JLQ3 304 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 A0A0G2JNG1 304 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 KIR2DS3K7RE56 304 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 CTRB1P17538 263 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 HRH1P35367 487 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 GZMMP51124 257 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 SNRPEP62304 92 aaKnown RBP12.74□□□□□ -0.37
SMC5-201ENST00000361138 RPP30P78346 268 aaKnown RBP12.74□□□□□ -0.37
SMC5-201ENST00000361138 KIR2DS5Q14953 304 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 CTRB2Q6GPI1 263 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 MED16Q9Y2X0 877 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 CCL27Q9Y4X3 112 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 GJE1A6NN92 205 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 MCRIP1C9JLW8 97 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 YY2O15391 372 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 GLSO94925 669 aaPredicted RBP12.74□□□□□ -0.37
SMC5-201ENST00000361138 NQO2P16083 231 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 GNB3P16520 340 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 TRHRP34981 398 aaPredicted RBP12.74□□□□□ -0.37
SMC5-201ENST00000361138 RPUSD3Q6P087 351 aaKnown RBP12.74□□□□□ -0.37
SMC5-201ENST00000361138 ZNF683Q8IZ20 524 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 MUC20Q8N307 709 aaPredicted RBP12.74□□□□□ -0.37
SMC5-201ENST00000361138 KIR3DX1Q9H7L2 352 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 A0A0A6YYD5 115 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 LOC107986453A0A1B0GWG9 222 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 HSBP1L1C9JCN9 74 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 ZNF587BE7ETH6 402 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 ERVH48-1M5A8F1 160 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 TK1P04183 234 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 RPL12P30050 165 aaKnown RBP12.74□□□□□ -0.37
SMC5-201ENST00000361138 MRPL49Q13405 166 aaKnown RBP12.74□□□□□ -0.37
SMC5-201ENST00000361138 MOB3CQ70IA8 216 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 OR13C8Q8NGS7 320 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 PCDHB10Q9UN67 800 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 MRPS17Q9Y2R5 130 aaKnown RBP12.74□□□□□ -0.37
SMC5-201ENST00000361138 SULT2B1O00204 365 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 BHLHE40O14503 412 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 BET1O15155 118 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 RPL27P61353 136 aaKnown RBP12.74□□□□□ -0.37
SMC5-201ENST00000361138 UBXN2BQ14CS0 331 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 NPSR1Q6W5P4 371 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 TMEM217Q8N7C4 229 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 TEX19Q8NA77 164 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 AKR1E2Q96JD6 320 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 TOLLIPQ9H0E2 274 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 ENKD1Q9H0I2 346 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 FBXO4Q9UKT5 387 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 GAB2Q9UQC2 676 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 MTCP1P56278 107 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 TMEM65Q6PI78 240 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 C10orf111Q8N326 155 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 HPSE2Q8WWQ2 592 aa12.74□□□□□ -0.37
SMC5-201ENST00000361138 CTDSPLO15194 276 aa12.73□□□□□ -0.37
SMC5-201ENST00000361138 CALCRP30988 508 aa12.73□□□□□ -0.37
SMC5-201ENST00000361138 ZNF133P52736 654 aaPredicted RBP12.73□□□□□ -0.37
SMC5-201ENST00000361138 MRPL58Q14197 206 aaKnown RBP12.73□□□□□ -0.37
SMC5-201ENST00000361138 SMAD2Q15796 467 aaKnown RBP12.73□□□□□ -0.37
SMC5-201ENST00000361138 COA3Q9Y2R0 106 aaPredicted RBP12.73□□□□□ -0.37
SMC5-201ENST00000361138 DBHP09172 617 aa12.73□□□□□ -0.37
SMC5-201ENST00000361138 CPN1P15169 458 aa12.73□□□□□ -0.37
SMC5-201ENST00000361138 CST5P28325 142 aaPredicted RBP12.73□□□□□ -0.37
SMC5-201ENST00000361138 PCBP3P57721 371 aaKnown RBP12.73□□□□□ -0.37
SMC5-201ENST00000361138 TRILQ7L0X0 811 aa12.73□□□□□ -0.37
SMC5-201ENST00000361138 FBXL6Q8N531 539 aa12.73□□□□□ -0.37
SMC5-201ENST00000361138 ZNF611Q8N823 705 aa12.73□□□□□ -0.37
SMC5-201ENST00000361138 OR4D10Q8NGI6 311 aa12.73□□□□□ -0.37
SMC5-201ENST00000361138 OR6K3Q8NGY3 331 aa12.73□□□□□ -0.37
SMC5-201ENST00000361138 C2orf50Q96LR7 162 aa12.73□□□□□ -0.37
SMC5-201ENST00000361138 WISP3O95389 354 aaPredicted RBP12.73□□□□□ -0.37
SMC5-201ENST00000361138 SEMA4FO95754 770 aa12.73□□□□□ -0.37
SMC5-201ENST00000361138 ALOX5APP20292 161 aa12.73□□□□□ -0.37
SMC5-201ENST00000361138 DUSP1P28562 367 aa12.73□□□□□ -0.37
SMC5-201ENST00000361138 ADIRFQ15847 76 aa12.73□□□□□ -0.37
SMC5-201ENST00000361138 SDSLQ96GA7 329 aa12.73□□□□□ -0.37
SMC5-201ENST00000361138 JAM3Q9BX67 310 aa12.73□□□□□ -0.37
SMC5-201ENST00000361138 AK3Q9UIJ7 227 aa12.73□□□□□ -0.37
SMC5-201ENST00000361138 KCNE3Q9Y6H6 103 aa12.73□□□□□ -0.37
SMC5-201ENST00000361138 TCRBV16S1A1N1A0A5B0 115 aa12.73□□□□□ -0.37
SMC5-201ENST00000361138 ANKRD20A5PA0PJZ0 165 aa12.73□□□□□ -0.37
SMC5-201ENST00000361138 DFFBO76075 338 aa12.73□□□□□ -0.37
SMC5-201ENST00000361138 FBXO46Q6PJ61 603 aaPredicted RBP12.73□□□□□ -0.37
SMC5-201ENST00000361138 LGI3Q8N145 548 aa12.73□□□□□ -0.37
SMC5-201ENST00000361138 SFT2D1Q8WV19 159 aa12.73□□□□□ -0.37
SMC5-201ENST00000361138 HSD17B8Q92506 261 aa12.73□□□□□ -0.37
SMC5-201ENST00000361138 BANF2Q9H503 90 aa12.73□□□□□ -0.37
SMC5-201ENST00000361138 LILRB3O75022 631 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 MT-ATP6P00846 226 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 RPA2P15927 270 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 TBPP20226 339 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 OR1D4P47884 311 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 TAF9Q16594 264 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 RTN4RL1Q86UN2 441 aaPredicted RBP12.72□□□□□ -0.37
SMC5-201ENST00000361138 PLXDC1Q8IUK5 500 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 RCBTB1Q8NDN9 531 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 NXT1Q9UKK6 140 aaKnown RBP12.72□□□□□ -0.37
SMC5-201ENST00000361138 FTCDNL1E5RQL4 147 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms