RNA–Protein interactions for RNA: ENST00000360535.8

CLIP3-201, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP3, Length 3,370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-201ENST00000360535 LOC101059948A0A1B0GTJ6 334 aa10.93□□□□□ -0.66
CLIP3-201ENST00000360535 TMEM150CB9EJG8 249 aa10.93□□□□□ -0.66
CLIP3-201ENST00000360535 LDOC1O95751 146 aaPredicted RBP10.93□□□□□ -0.66
CLIP3-201ENST00000360535 HLA-AP01891 365 aaKnown RBP10.93□□□□□ -0.66
CLIP3-201ENST00000360535 HOXC4P09017 264 aaPredicted RBP10.93□□□□□ -0.66
CLIP3-201ENST00000360535 ZP3P21754 424 aa10.93□□□□□ -0.66
CLIP3-201ENST00000360535 LUMP51884 338 aaPredicted RBP10.93□□□□□ -0.66
CLIP3-201ENST00000360535 RIDAP52758 137 aaKnown RBP10.93□□□□□ -0.66
CLIP3-201ENST00000360535 HYAL1Q12794 435 aa10.93□□□□□ -0.66
CLIP3-201ENST00000360535 SHHQ15465 462 aa10.93□□□□□ -0.66
CLIP3-201ENST00000360535 TMEM225Q6GV28 225 aa10.93□□□□□ -0.66
CLIP3-201ENST00000360535 C3orf33Q6P1S2 294 aa10.93□□□□□ -0.66
CLIP3-201ENST00000360535 SLC51BQ86UW2 128 aa10.93□□□□□ -0.66
CLIP3-201ENST00000360535 ZNF440Q8IYI8 595 aa10.93□□□□□ -0.66
CLIP3-201ENST00000360535 ESX1Q8N693 406 aa10.93□□□□□ -0.66
CLIP3-201ENST00000360535 OR10K1Q8NGX5 313 aa10.93□□□□□ -0.66
CLIP3-201ENST00000360535 C15orf40Q8WUR7 153 aa10.93□□□□□ -0.66
CLIP3-201ENST00000360535 TAS2R8Q9NYW2 309 aa10.93□□□□□ -0.66
CLIP3-201ENST00000360535 TAS2R3Q9NYW6 316 aa10.93□□□□□ -0.66
CLIP3-201ENST00000360535 MSRAQ9UJ68 235 aa10.93□□□□□ -0.66
CLIP3-201ENST00000360535 CD207Q9UJ71 328 aa10.93□□□□□ -0.66
CLIP3-201ENST00000360535 EEF1E1-BLOC1S5C9J1V9 151 aa10.93□□□□□ -0.66
CLIP3-201ENST00000360535 P2RY10O00398 339 aa10.93□□□□□ -0.66
CLIP3-201ENST00000360535 IGHV4-34P06331 123 aa10.93□□□□□ -0.66
CLIP3-201ENST00000360535 MYF5P13349 255 aa10.93□□□□□ -0.66
CLIP3-201ENST00000360535 ARL4DP49703 201 aa10.93□□□□□ -0.66
CLIP3-201ENST00000360535 GLT8D1Q68CQ7 371 aa10.93□□□□□ -0.66
CLIP3-201ENST00000360535 FBXW5Q969U6 566 aa10.93□□□□□ -0.66
CLIP3-201ENST00000360535 KLHDC7BQ96G42 594 aa10.93□□□□□ -0.66
CLIP3-201ENST00000360535 OR8B4Q96RC9 309 aa10.93□□□□□ -0.66
CLIP3-201ENST00000360535 GPX7Q96SL4 187 aaPredicted RBP10.93□□□□□ -0.66
CLIP3-201ENST00000360535 ABHD6Q9BV23 337 aa10.93□□□□□ -0.66
CLIP3-201ENST00000360535 SLC19A3Q9BZV2 496 aa10.93□□□□□ -0.66
CLIP3-201ENST00000360535 COMMD9Q9P000 198 aa10.93□□□□□ -0.66
CLIP3-201ENST00000360535 GMEB2Q9UKD1 530 aa10.93□□□□□ -0.66
CLIP3-201ENST00000360535 MRTO4Q9UKD2 239 aaKnown RBP10.93□□□□□ -0.66
CLIP3-201ENST00000360535 TRBV5-7A0A0A0MS05 114 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 SPTY2D1-AS1A0A0U1RR47 76 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 C13orf42A0A1B0GVH6 325 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 OR5K4A6NMS3 321 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 ZNF736B4DX44 427 aaPredicted RBP10.92□□□□□ -0.66
CLIP3-201ENST00000360535 PRAMEF26H0Y7S4 382 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 NSA2O95478 260 aaKnown RBP10.92□□□□□ -0.66
CLIP3-201ENST00000360535 GP1BBP13224 206 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 AKR1C4P17516 323 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 RORAP35398 523 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 SLC37A1P57057 533 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 CXADRP78310 365 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 PLCXD2Q0VAA5 305 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 NR0B2Q15466 257 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 NSDHLQ15738 373 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 ASPHD2Q6ICH7 369 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 UNQ6126/PRO20091Q6UXV3 157 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 HDDC2Q7Z4H3 204 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 COMMD2Q86X83 199 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 HOXB13Q92826 284 aaPredicted RBP10.92□□□□□ -0.66
CLIP3-201ENST00000360535 SEH1LQ96EE3 360 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 NUDT22Q9BRQ3 303 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 MRI1Q9BV20 369 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 LRRC61Q9BV99 259 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 DZANK1Q9NVP4 752 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 MRPL22Q9NWU5 206 aaKnown RBP10.92□□□□□ -0.66
CLIP3-201ENST00000360535 LRP12Q9Y561 859 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 SLC17A2O00624 439 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 CD34P28906 385 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 AVPR2P30518 371 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 INSM1Q01101 510 aaPredicted RBP10.92□□□□□ -0.66
CLIP3-201ENST00000360535 DMWDQ09019 674 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.92□□□□□ -0.66
CLIP3-201ENST00000360535 GFOD2Q3B7J2 385 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 ZNF679Q8IYX0 411 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 CLEC1AQ8NC01 280 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 OR1S1Q8NH92 325 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 MCHR2Q969V1 340 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 WBP1Q96G27 269 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 ZNF587Q96SQ5 575 aaPredicted RBP10.92□□□□□ -0.66
CLIP3-201ENST00000360535 SLC6A7Q99884 636 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 EMC6Q9BV81 110 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 NUDT9Q9BW91 350 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 VDAC3Q9Y277 283 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 SDK2Q58EX2 2172 aa10.92□□□□□ -0.66
CLIP3-201ENST00000360535 PRSS37A4D1T9 235 aa10.91□□□□□ -0.66
CLIP3-201ENST00000360535 SHISA8B8ZZ34 492 aa10.91□□□□□ -0.66
CLIP3-201ENST00000360535 ZNF432O94892 652 aa10.91□□□□□ -0.66
CLIP3-201ENST00000360535 DCNP07585 359 aaKnown RBP10.91□□□□□ -0.66
CLIP3-201ENST00000360535 EGR3Q06889 387 aa10.91□□□□□ -0.66
CLIP3-201ENST00000360535 FBXO46Q6PJ61 603 aaPredicted RBP10.91□□□□□ -0.66
CLIP3-201ENST00000360535 MAMDC2Q7Z304 686 aaPredicted RBP10.91□□□□□ -0.66
CLIP3-201ENST00000360535 RTN4RL2Q86UN3 420 aa10.91□□□□□ -0.66
CLIP3-201ENST00000360535 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.91□□□□□ -0.66
CLIP3-201ENST00000360535 CDH26Q8IXH8 852 aa10.91□□□□□ -0.66
CLIP3-201ENST00000360535 RPS4Y2Q8TD47 263 aa10.91□□□□□ -0.66
CLIP3-201ENST00000360535 NUDCD2Q8WVJ2 157 aa10.91□□□□□ -0.66
CLIP3-201ENST00000360535 ASB5Q8WWX0 329 aa10.91□□□□□ -0.66
CLIP3-201ENST00000360535 SLC25A28Q96A46 364 aa10.91□□□□□ -0.66
CLIP3-201ENST00000360535 NPAS1Q99742 590 aa10.91□□□□□ -0.66
CLIP3-201ENST00000360535 MESP1Q9BRJ9 268 aa10.91□□□□□ -0.66
CLIP3-201ENST00000360535 POTEKPQ9BYX7 375 aa10.91□□□□□ -0.66
CLIP3-201ENST00000360535 OR5H14A6NHG9 310 aa10.91□□□□□ -0.66
CLIP3-201ENST00000360535 IL33O95760 270 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms