RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 EMC7Q9NPA0 242 aa10.85□□□□□ -0.67
NIF3L1-201ENST00000359683 SLC17A5Q9NRA2 495 aa10.85□□□□□ -0.67
NIF3L1-201ENST00000359683 UBAP1Q9NZ09 502 aa10.85□□□□□ -0.67
NIF3L1-201ENST00000359683 ZNF224Q9NZL3 707 aa10.85□□□□□ -0.67
NIF3L1-201ENST00000359683 KCNG2Q9UJ96 466 aa10.85□□□□□ -0.67
NIF3L1-201ENST00000359683 RPL36Q9Y3U8 105 aaKnown RBP10.85□□□□□ -0.67
NIF3L1-201ENST00000359683 PCDHGB5Q9Y5G0 923 aa10.85□□□□□ -0.67
NIF3L1-201ENST00000359683 COMMD3-BMI1R4GMX3 469 aa10.85□□□□□ -0.67
NIF3L1-201ENST00000359683 CACNA1CQ13936 2221 aa10.85□□□□□ -0.67
NIF3L1-201ENST00000359683 ARPC4-TTLL3A0A0A6YYG9 625 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 OR5H1A6NKK0 313 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 ZNF593O00488 134 aaPredicted RBP10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 SBK2P0C263 348 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 DBTP11182 482 aaKnown RBP10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 ZNF823P16415 610 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 SLC15A1P46059 708 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 ENTPD1P49961 510 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 NUDT6P53370 316 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 CSNK2BP67870 215 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 ZNF91Q05481 1191 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 MED21Q13503 144 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 TIMM23BQ5SRD1 257 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 OTPQ5XKR4 325 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 KRT80Q6KB66 452 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 DPPA2Q7Z7J5 298 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 SYT9Q86SS6 491 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 LRRC18Q8N456 261 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 OR10H5Q8NGA6 315 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 FGFBP3Q8TAT2 258 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 S100PBPQ96BU1 408 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 FBXO17Q96EF6 278 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 RNFT2Q96EX2 444 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 INTS14Q96SY0 518 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 ACTR6Q9GZN1 396 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 ADGRL4Q9HBW9 690 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 OBP2BQ9NPH6 170 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 B3GNT2Q9NY97 397 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 CYB5R1Q9UHQ9 305 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 EXOGQ9Y2C4 368 aaKnown RBP10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 DOPEY1Q5JWR5 2465 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 HCFC1P51610 2035 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 C12orf71A8MTZ7 269 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 SELENOFO60613 162 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 MMP7P09237 267 aaPredicted RBP10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 GRNP28799 593 aaKnown RBP10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 ADAM8P78325 824 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 SORDQ00796 357 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 POU4F2Q12837 409 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 SLC16A14Q7RTX9 510 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 SLC16A9Q7RTY1 509 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 ERI1Q8IV48 349 aaKnown RBP10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 CNN2Q99439 309 aaKnown RBP10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 YIPF3Q9GZM5 350 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 KCNN2Q9H2S1 579 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 SLC25A15Q9Y619 301 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 LHFPL6Q9Y693 200 aa10.84□□□□□ -0.67
NIF3L1-201ENST00000359683 UNC79Q9P2D8 2635 aa10.83□□□□□ -0.67
NIF3L1-201ENST00000359683 ZNF503-AS2A6NEH8 195 aa10.83□□□□□ -0.68
NIF3L1-201ENST00000359683 J3QRE1 110 aa10.83□□□□□ -0.68
NIF3L1-201ENST00000359683 TMCC2O75069 709 aa10.83□□□□□ -0.68
NIF3L1-201ENST00000359683 HLA-HP01893 362 aa10.83□□□□□ -0.68
NIF3L1-201ENST00000359683 PATE4P0C8F1 98 aa10.83□□□□□ -0.68
NIF3L1-201ENST00000359683 PSKH1P11801 424 aa10.83□□□□□ -0.68
NIF3L1-201ENST00000359683 PPP3CBP16298 524 aa10.83□□□□□ -0.68
NIF3L1-201ENST00000359683 UBE2NP61088 152 aaKnown RBP10.83□□□□□ -0.68
NIF3L1-201ENST00000359683 HIST1H3AP68431 136 aa10.83□□□□□ -0.68
NIF3L1-201ENST00000359683 RAB40BQ12829 278 aa10.83□□□□□ -0.68
NIF3L1-201ENST00000359683 SLC36A2Q495M3 483 aa10.83□□□□□ -0.68
NIF3L1-201ENST00000359683 HIST2H3PS2Q5TEC6 136 aa10.83□□□□□ -0.68
NIF3L1-201ENST00000359683 SLC18B1Q6NT16 456 aa10.83□□□□□ -0.68
NIF3L1-201ENST00000359683 C22orf34Q6ZV56 151 aa10.83□□□□□ -0.68
NIF3L1-201ENST00000359683 HIST2H3AQ71DI3 136 aa10.83□□□□□ -0.68
NIF3L1-201ENST00000359683 SHFQ7M4L6 423 aa10.83□□□□□ -0.68
NIF3L1-201ENST00000359683 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.83□□□□□ -0.68
NIF3L1-201ENST00000359683 BPIFB6Q8NFQ5 453 aa10.83□□□□□ -0.68
NIF3L1-201ENST00000359683 OR51G2Q8NGK0 314 aa10.83□□□□□ -0.68
NIF3L1-201ENST00000359683 HSD17B8Q92506 261 aa10.83□□□□□ -0.68
NIF3L1-201ENST00000359683 GGHQ92820 318 aa10.83□□□□□ -0.68
NIF3L1-201ENST00000359683 LGALS12Q96DT0 336 aa10.83□□□□□ -0.68
NIF3L1-201ENST00000359683 CDADC1Q9BWV3 514 aa10.83□□□□□ -0.68
NIF3L1-201ENST00000359683 NPDC1Q9NQX5 325 aaPredicted RBP10.83□□□□□ -0.68
NIF3L1-201ENST00000359683 PSORS1C1Q9UIG5 152 aa10.83□□□□□ -0.68
NIF3L1-201ENST00000359683 AMDHD2Q9Y303 409 aa10.83□□□□□ -0.68
NIF3L1-201ENST00000359683 NOTCH2Q04721 2471 aa10.82□□□□□ -0.68
NIF3L1-201ENST00000359683 SLC1A7O00341 560 aa10.82□□□□□ -0.68
NIF3L1-201ENST00000359683 XPNPEP2O43895 674 aa10.82□□□□□ -0.68
NIF3L1-201ENST00000359683 UBL3O95164 117 aa10.82□□□□□ -0.68
NIF3L1-201ENST00000359683 CLDN1O95832 211 aa10.82□□□□□ -0.68
NIF3L1-201ENST00000359683 MRPL3P09001 348 aaKnown RBP10.82□□□□□ -0.68
NIF3L1-201ENST00000359683 CCDC159P0C7I6 412 aa10.82□□□□□ -0.68
NIF3L1-201ENST00000359683 ZNF32P17041 273 aa10.82□□□□□ -0.68
NIF3L1-201ENST00000359683 PAX7P23759 505 aa10.82□□□□□ -0.68
NIF3L1-201ENST00000359683 COL8A1P27658 744 aa10.82□□□□□ -0.68
NIF3L1-201ENST00000359683 ATP6V1E1P36543 226 aa10.82□□□□□ -0.68
NIF3L1-201ENST00000359683 ARR3P36575 388 aa10.82□□□□□ -0.68
NIF3L1-201ENST00000359683 NAA10P41227 235 aaPredicted RBP10.82□□□□□ -0.68
NIF3L1-201ENST00000359683 RPS27P42677 84 aaKnown RBP10.82□□□□□ -0.68
NIF3L1-201ENST00000359683 PCBD1P61457 104 aa10.82□□□□□ -0.68
NIF3L1-201ENST00000359683 AQP6Q13520 282 aa10.82□□□□□ -0.68
NIF3L1-201ENST00000359683 TAB1Q15750 504 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms