RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 HPF1Q9NWY4 346 aa10.08□□□□□ -0.8
SSU72-202ENST00000359060 COQ3Q9NZJ6 369 aa10.08□□□□□ -0.8
SSU72-202ENST00000359060 LRP12Q9Y561 859 aa10.08□□□□□ -0.8
SSU72-202ENST00000359060 NUP210Q8TEM1 1887 aaPredicted RBP10.08□□□□□ -0.8
SSU72-202ENST00000359060 A0A1W2PR77 199 aa10.08□□□□□ -0.8
SSU72-202ENST00000359060 PIN1P1O15428 100 aa10.08□□□□□ -0.8
SSU72-202ENST00000359060 WDPCPO95876 746 aa10.08□□□□□ -0.8
SSU72-202ENST00000359060 TMIGD3P0DMS9 266 aaPredicted RBP10.08□□□□□ -0.8
SSU72-202ENST00000359060 HLA-DOBP13765 273 aa10.08□□□□□ -0.8
SSU72-202ENST00000359060 C5orf46Q6UWT4 87 aa10.08□□□□□ -0.8
SSU72-202ENST00000359060 IDO2Q6ZQW0 420 aa10.08□□□□□ -0.8
SSU72-202ENST00000359060 CREB3L2Q70SY1 520 aa10.08□□□□□ -0.8
SSU72-202ENST00000359060 PXKQ7Z7A4 578 aa10.08□□□□□ -0.8
SSU72-202ENST00000359060 PEG10Q86TG7 708 aaKnown RBP10.08□□□□□ -0.8
SSU72-202ENST00000359060 ADGRG3Q86Y34 549 aa10.08□□□□□ -0.8
SSU72-202ENST00000359060 ZNF687Q8N1G0 1237 aa10.08□□□□□ -0.8
SSU72-202ENST00000359060 BEST3Q8N1M1 668 aa10.08□□□□□ -0.8
SSU72-202ENST00000359060 BPIFB2Q8N4F0 458 aa10.08□□□□□ -0.8
SSU72-202ENST00000359060 OR52B4Q8NGK2 314 aa10.08□□□□□ -0.8
SSU72-202ENST00000359060 OR5D18Q8NGL1 313 aa10.08□□□□□ -0.8
SSU72-202ENST00000359060 PRRG4Q9BZD6 226 aa10.08□□□□□ -0.8
SSU72-202ENST00000359060 KLHL13Q9P2N7 655 aa10.08□□□□□ -0.8
SSU72-202ENST00000359060 CNOT1A5YKK6 2376 aaKnown RBP10.08□□□□□ -0.8
SSU72-202ENST00000359060 OR4C45A6NMZ5 311 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 ZNF878C9JN71 531 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 ASAH2BP0C7U1 165 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 PGAM2P15259 253 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 APOBEC1P41238 236 aaKnown RBP10.07□□□□□ -0.8
SSU72-202ENST00000359060 LIMK1P53667 647 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 EGR4Q05215 589 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 SLC22A6Q4U2R8 563 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 PLA1AQ53H76 456 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 HDDC2Q7Z4H3 204 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 CPEB2Q7Z5Q1 589 aaKnown RBP10.07□□□□□ -0.8
SSU72-202ENST00000359060 D2HGDHQ8N465 521 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 OR5D14Q8NGL3 314 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 EDAQ92838 391 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 UBL7Q96S82 380 aaPredicted RBP10.07□□□□□ -0.8
SSU72-202ENST00000359060 ZNF649Q9BS31 505 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 A0A087WV48 116 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 SLC22A23A1A5C7 686 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 TMEM235A6NFC5 223 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 OR6C76A6NM76 312 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 RAB3AP20336 220 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 CLDN17P56750 224 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 IGLV3-21P80748 117 aaPredicted RBP10.07□□□□□ -0.8
SSU72-202ENST00000359060 FAM57BQ71RH2 274 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 FOXRED2Q8IWF2 684 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 FOXJ3Q9UPW0 622 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 UNC80Q8N2C7 3258 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 GGT3PA6NGU5 568 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 POM121CA8CG34 1229 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 MEN1O00255 615 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 RP2O75695 350 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 F10P00742 488 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 CD3DP04234 171 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 PLAURQ03405 335 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 LINC01590Q5TEZ4 76 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 CDC20BQ86Y33 519 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 CCDC28AQ8IWP9 274 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 SLC25A45Q8N413 288 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 LRRC18Q8N456 261 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 OR10G3Q8NGC4 313 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 SELENOIQ9C0D9 397 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 F5H5P2 479 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 SC5DO75845 299 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 ANKRD34CP0C6C1 535 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 BDKRB2P30411 391 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 CSF2RBP32927 897 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 TAS2R19P59542 299 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 GGTLC2Q14390 218 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 ISXQ2M1V0 245 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 NKAPLQ5M9Q1 402 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 RABEPKQ7Z6M1 372 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 ST8SIA1Q92185 356 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 CCDC74BQ96LY2 380 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 KLHDC3Q9BQ90 382 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 ASH2LQ9UBL3 628 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 SLC23A1Q9UHI7 598 aa10.07□□□□□ -0.8
SSU72-202ENST00000359060 EP300Q09472 2414 aaPredicted RBP10.06□□□□□ -0.8
SSU72-202ENST00000359060 EEF1E1-BLOC1S5C9J1V9 151 aa10.06□□□□□ -0.8
SSU72-202ENST00000359060 J3QRE1 110 aa10.06□□□□□ -0.8
SSU72-202ENST00000359060 CRTAPO75718 401 aaPredicted RBP10.06□□□□□ -0.8
SSU72-202ENST00000359060 HPXP02790 462 aa10.06□□□□□ -0.8
SSU72-202ENST00000359060 ERCC1P07992 297 aaPredicted RBP10.06□□□□□ -0.8
SSU72-202ENST00000359060 NR2C1P13056 603 aa10.06□□□□□ -0.8
SSU72-202ENST00000359060 THBS2P35442 1172 aa10.06□□□□□ -0.8
SSU72-202ENST00000359060 GSG1Q2KHT4 349 aa10.06□□□□□ -0.8
SSU72-202ENST00000359060 COL13A1Q5TAT6 717 aaPredicted RBP10.06□□□□□ -0.8
SSU72-202ENST00000359060 Q6ZTK2 550 aa10.06□□□□□ -0.8
SSU72-202ENST00000359060 OR4C16Q8NGL9 310 aa10.06□□□□□ -0.8
SSU72-202ENST00000359060 OR6M1Q8NGM8 313 aa10.06□□□□□ -0.8
SSU72-202ENST00000359060 SLAMF6Q96DU3 332 aa10.06□□□□□ -0.8
SSU72-202ENST00000359060 UCK1Q9HA47 277 aa10.06□□□□□ -0.8
SSU72-202ENST00000359060 ZNF160Q9HCG1 818 aa10.06□□□□□ -0.8
SSU72-202ENST00000359060 A0A0G2JK05 382 aa10.06□□□□□ -0.8
SSU72-202ENST00000359060 PLPP3O14495 311 aa10.06□□□□□ -0.8
SSU72-202ENST00000359060 ZNF35P13682 527 aa10.06□□□□□ -0.8
SSU72-202ENST00000359060 CCNOP22674 350 aa10.06□□□□□ -0.8
SSU72-202ENST00000359060 DPP4P27487 766 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms