RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 THAP5Q7Z6K1 395 aa12.98□□□□□ -0.33
CCNE1-202ENST00000357943 P2RY8Q86VZ1 359 aa12.98□□□□□ -0.33
CCNE1-202ENST00000357943 ERI1Q8IV48 349 aaKnown RBP12.98□□□□□ -0.33
CCNE1-202ENST00000357943 TIGD4Q8IY51 512 aa12.98□□□□□ -0.33
CCNE1-202ENST00000357943 SMAP2Q8WU79 429 aaPredicted RBP12.98□□□□□ -0.33
CCNE1-202ENST00000357943 HSD17B8Q92506 261 aa12.98□□□□□ -0.33
CCNE1-202ENST00000357943 USB1Q9BQ65 265 aaKnown RBP12.98□□□□□ -0.33
CCNE1-202ENST00000357943 CXorf56Q9H5V9 222 aa12.98□□□□□ -0.33
CCNE1-202ENST00000357943 AMBNQ9NP70 447 aa12.98□□□□□ -0.33
CCNE1-202ENST00000357943 BATF3Q9NR55 127 aa12.98□□□□□ -0.33
CCNE1-202ENST00000357943 CLN6Q9NWW5 311 aa12.98□□□□□ -0.33
CCNE1-202ENST00000357943 B3GNT2Q9NY97 397 aa12.98□□□□□ -0.33
CCNE1-202ENST00000357943 ASH2LQ9UBL3 628 aa12.98□□□□□ -0.33
CCNE1-202ENST00000357943 NDRG3Q9UGV2 375 aa12.98□□□□□ -0.33
CCNE1-202ENST00000357943 SPTAN1Q13813 2472 aaKnown RBP12.97□□□□□ -0.33
CCNE1-202ENST00000357943 MRPL3P09001 348 aaKnown RBP12.97□□□□□ -0.33
CCNE1-202ENST00000357943 CST2P09228 141 aa12.97□□□□□ -0.33
CCNE1-202ENST00000357943 MMP7P09237 267 aaPredicted RBP12.97□□□□□ -0.33
CCNE1-202ENST00000357943 HOXB1P14653 301 aaPredicted RBP12.97□□□□□ -0.33
CCNE1-202ENST00000357943 ZNF823P16415 610 aa12.97□□□□□ -0.33
CCNE1-202ENST00000357943 ZNF32P17041 273 aa12.97□□□□□ -0.33
CCNE1-202ENST00000357943 MYF6P23409 242 aa12.97□□□□□ -0.33
CCNE1-202ENST00000357943 NAA10P41227 235 aaPredicted RBP12.97□□□□□ -0.33
CCNE1-202ENST00000357943 RAB1AP62820 205 aa12.97□□□□□ -0.33
CCNE1-202ENST00000357943 CDK5R2Q13319 367 aa12.97□□□□□ -0.33
CCNE1-202ENST00000357943 PPA1Q15181 289 aa12.97□□□□□ -0.33
CCNE1-202ENST00000357943 LAIR2Q6ISS4 152 aa12.97□□□□□ -0.33
CCNE1-202ENST00000357943 CORO6Q6QEF8 472 aa12.97□□□□□ -0.33
CCNE1-202ENST00000357943 SEZ6L2Q6UXD5 910 aa12.97□□□□□ -0.33
CCNE1-202ENST00000357943 MDP1Q86V88 176 aa12.97□□□□□ -0.33
CCNE1-202ENST00000357943 LINC00346Q8IVM7 164 aa12.97□□□□□ -0.33
CCNE1-202ENST00000357943 OR10H5Q8NGA6 315 aa12.97□□□□□ -0.33
CCNE1-202ENST00000357943 FBLIM1Q8WUP2 373 aa12.97□□□□□ -0.33
CCNE1-202ENST00000357943 RFKQ969G6 155 aa12.97□□□□□ -0.33
CCNE1-202ENST00000357943 MUCL1Q96DR8 90 aa12.97□□□□□ -0.33
CCNE1-202ENST00000357943 CNBD2Q96M20 576 aa12.97□□□□□ -0.33
CCNE1-202ENST00000357943 C1QTNF6Q9BXI9 259 aa12.97□□□□□ -0.33
CCNE1-202ENST00000357943 MARCH7Q9H992 704 aa12.97□□□□□ -0.33
CCNE1-202ENST00000357943 UBAP1Q9NZ09 502 aa12.97□□□□□ -0.33
CCNE1-202ENST00000357943 AMDHD2Q9Y303 409 aa12.97□□□□□ -0.33
CCNE1-202ENST00000357943 LHFPL6Q9Y693 200 aa12.97□□□□□ -0.33
CCNE1-202ENST00000357943 PRR14LQ5THK1 2151 aa12.97□□□□□ -0.33
CCNE1-202ENST00000357943 ZNF593O00488 134 aaPredicted RBP12.96□□□□□ -0.33
CCNE1-202ENST00000357943 UBL3O95164 117 aa12.96□□□□□ -0.33
CCNE1-202ENST00000357943 APOL3O95236 402 aa12.96□□□□□ -0.33
CCNE1-202ENST00000357943 PPP3CBP16298 524 aa12.96□□□□□ -0.33
CCNE1-202ENST00000357943 GGTLC2Q14390 218 aa12.96□□□□□ -0.33
CCNE1-202ENST00000357943 GSG1Q2KHT4 349 aa12.96□□□□□ -0.33
CCNE1-202ENST00000357943 SLC36A2Q495M3 483 aa12.96□□□□□ -0.33
CCNE1-202ENST00000357943 LCN1P1Q5VSP4 162 aa12.96□□□□□ -0.33
CCNE1-202ENST00000357943 DPY19L4Q7Z388 723 aa12.96□□□□□ -0.33
CCNE1-202ENST00000357943 DMRTC2Q8IXT2 367 aaPredicted RBP12.96□□□□□ -0.33
CCNE1-202ENST00000357943 CCDC36Q8IYA8 594 aa12.96□□□□□ -0.33
CCNE1-202ENST00000357943 OR51G2Q8NGK0 314 aa12.96□□□□□ -0.33
CCNE1-202ENST00000357943 OR6N2Q8NGY6 317 aa12.96□□□□□ -0.33
CCNE1-202ENST00000357943 NANOS1Q8WY41 292 aaKnown RBP12.96□□□□□ -0.33
CCNE1-202ENST00000357943 Q96MT0 163 aa12.96□□□□□ -0.33
CCNE1-202ENST00000357943 INTS14Q96SY0 518 aa12.96□□□□□ -0.33
CCNE1-202ENST00000357943 CDADC1Q9BWV3 514 aa12.96□□□□□ -0.33
CCNE1-202ENST00000357943 KCNN2Q9H2S1 579 aa12.96□□□□□ -0.33
CCNE1-202ENST00000357943 RNF121Q9H920 327 aa12.96□□□□□ -0.33
CCNE1-202ENST00000357943 OBP2BQ9NPH6 170 aa12.96□□□□□ -0.33
CCNE1-202ENST00000357943 HAO2Q9NYQ3 351 aa12.96□□□□□ -0.33
CCNE1-202ENST00000357943 NPAP1Q9NZP6 1156 aa12.96□□□□□ -0.33
CCNE1-202ENST00000357943 CRIM1Q9NZV1 1036 aa12.96□□□□□ -0.33
CCNE1-202ENST00000357943 WARS2Q9UGM6 360 aaKnown RBP12.96□□□□□ -0.33
CCNE1-202ENST00000357943 CYB5R1Q9UHQ9 305 aa12.96□□□□□ -0.33
CCNE1-202ENST00000357943 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.96□□□□□ -0.33
CCNE1-202ENST00000357943 POLR1DQ9Y2S0 133 aa12.96□□□□□ -0.33
CCNE1-202ENST00000357943 PCDHGB5Q9Y5G0 923 aa12.96□□□□□ -0.33
CCNE1-202ENST00000357943 C12orf71A8MTZ7 269 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 RER1O15258 196 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 SPARCP09486 303 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 KIR2DL3P43628 341 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 MTNR1AP48039 350 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 ENTPD1P49961 510 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 ZNF91Q05481 1191 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 AQP6Q13520 282 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 PCK2Q16822 640 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 SLC18B1Q6NT16 456 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 SHFQ7M4L6 423 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 WFDC8Q8IUA0 241 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 ACBD4Q8NC06 268 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 ADGRL4Q9HBW9 690 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 KCNG2Q9UJ96 466 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 WNT11O96014 354 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 IGKV3-15P01624 115 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 CELA3BP08861 270 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 SBK2P0C263 348 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 DBTP11182 482 aaKnown RBP12.95□□□□□ -0.34
CCNE1-202ENST00000357943 HCCSP53701 268 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 PSG4Q00888 419 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 TEX30Q5JUR7 227 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 SYT9Q86SS6 491 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 MYPOPQ86VE0 399 aaPredicted RBP12.95□□□□□ -0.34
CCNE1-202ENST00000357943 OR4F15Q8NGB8 312 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 AKR7LQ8NHP1 331 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 RNFT2Q96EX2 444 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 MS4A3Q96HJ5 214 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 ZNF75AQ96N20 296 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms