RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 IL3RAP26951 378 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 METAP1P53582 386 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 HNF4GQ14541 408 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 ATPAF1Q5TC12 328 aaPredicted RBP10.74□□□□□ -0.69
COL9A1-202ENST00000357250 BCDIN3DQ7Z5W3 292 aaKnown RBP10.74□□□□□ -0.69
COL9A1-202ENST00000357250 DND1Q8IYX4 353 aaKnown RBP10.74□□□□□ -0.69
COL9A1-202ENST00000357250 UBE2FQ969M7 185 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 YIPF6Q96EC8 236 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 CMTM3Q96MX0 182 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 BARHL1Q9BZE3 327 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 PLAC1Q9HBJ0 212 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 SHPKQ9UHJ6 478 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 PPIL1Q9Y3C6 166 aa10.74□□□□□ -0.69
COL9A1-202ENST00000357250 QSER1Q2KHR3 1735 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 SPINT2O43291 252 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 CAPZBP47756 277 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 DPPA2Q7Z7J5 298 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 CALHM3Q86XJ0 350 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 CA13Q8N1Q1 262 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 OR1M1Q8NGA1 313 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 INTS12Q96CB8 462 aaKnown RBP10.73□□□□□ -0.69
COL9A1-202ENST00000357250 S1PR5Q9H228 398 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 HIPK2Q9H2X6 1198 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 GAREM1Q9H706 876 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 SLC39A9Q9NUM3 307 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 HAO2Q9NYQ3 351 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 LOC107986453A0A1B0GWG9 222 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 SNRPGP15A8MWD9 76 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 PDGFAP04085 211 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 EVX1P49640 407 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 TBC1D28Q2M2D7 210 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 DMBX1Q8NFW5 382 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 SLC35B4Q969S0 331 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 MARC2Q969Z3 335 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 APH1AQ96BI3 265 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 SDSLQ96GA7 329 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 SEC22AQ96IW7 307 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 PDCD1LG2Q9BQ51 273 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 PHF7Q9BWX1 381 aaPredicted RBP10.73□□□□□ -0.69
COL9A1-202ENST00000357250 ZCCHC4Q9H5U6 513 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 SLC23A2Q9UGH3 650 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 ZDBF2Q9HCK1 2354 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 A0A087WZY1 265 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 F6UZH7 168 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 H0Y8X5 98 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 DSCR3O14972 297 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 DOK2O60496 412 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 NXPH2O95156 264 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 GABRA2P47869 451 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 RBP2P50120 134 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 CDK5R1Q15078 307 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 FAM109BQ6ICB4 259 aaPredicted RBP10.73□□□□□ -0.69
COL9A1-202ENST00000357250 TMEM81Q6P7N7 255 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 LIMS2Q7Z4I7 341 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 RBPMSQ93062 196 aaKnown RBP10.73□□□□□ -0.69
COL9A1-202ENST00000357250 TCEAL2Q9H3H9 227 aaPredicted RBP10.73□□□□□ -0.69
COL9A1-202ENST00000357250 CACFD1Q9UGQ2 172 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 SBF2Q86WG5 1849 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 PAPPA2Q9BXP8 1791 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 ZNF705FA8MVS1 300 aaPredicted RBP10.73□□□□□ -0.69
COL9A1-202ENST00000357250 ZNF705DP0CH99 300 aaPredicted RBP10.73□□□□□ -0.69
COL9A1-202ENST00000357250 ZNF705BP0CI00 300 aaPredicted RBP10.73□□□□□ -0.69
COL9A1-202ENST00000357250 TCN2P20062 427 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 GALP22466 123 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 ITGB8P26012 769 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 RPS23P62266 143 aaKnown RBP10.73□□□□□ -0.69
COL9A1-202ENST00000357250 BEX5Q5H9J7 111 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 ASTLQ6HA08 431 aaPredicted RBP10.73□□□□□ -0.69
COL9A1-202ENST00000357250 CADM3Q8N126 398 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 TMEM99Q8N816 258 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 PLPP7Q8NBV4 271 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 OR52H1Q8NGJ2 320 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 TTC9Q92623 222 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 LIN37Q96GY3 246 aaPredicted RBP10.73□□□□□ -0.69
COL9A1-202ENST00000357250 MRGPRX4Q96LA9 322 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 SERTAD4Q9NUC0 356 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 QPCTLQ9NXS2 382 aa10.73□□□□□ -0.69
COL9A1-202ENST00000357250 TIMM8BQ9Y5J9 83 aaPredicted RBP10.73□□□□□ -0.69
COL9A1-202ENST00000357250 TUBAL3A6NHL2 446 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 ST8SIA3O43173 380 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 PEX11BO96011 259 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 NFYBP25208 207 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 PPT1P50897 306 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 CCR6P51684 374 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 OLIG3Q7RTU3 272 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 SPRED2Q7Z698 418 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 OR2A1Q8NGT9 310 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 OR4A16Q8NH70 328 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 OR2A14Q96R47 310 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 NIPSNAP3BQ9BS92 247 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 TXNIPQ9H3M7 391 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 ZNF385DQ9H6B1 395 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 ACOXLQ9NUZ1 547 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 PIGLQ9Y2B2 252 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 MN1Q10571 1320 aaPredicted RBP10.72□□□□□ -0.69
COL9A1-202ENST00000357250 TRAV1-2A0A0B4J238 106 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 A0A1W2PPH5 198 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 RPS10-NUDT3A0A1W2PQS6 291 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 LILRA5A6NI73 299 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 PHF1O43189 567 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms