RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 ALKBH3Q96Q83 286 aaPredicted RBP16.01■□□□□ 0.15
SMARCD3-202ENST00000356800 COQ7Q99807 217 aa16.01■□□□□ 0.15
SMARCD3-202ENST00000356800 RBM24Q9BX46 236 aaKnown RBP16.01■□□□□ 0.15
SMARCD3-202ENST00000356800 SLC25A18Q9H1K4 315 aa16.01■□□□□ 0.15
SMARCD3-202ENST00000356800 SLCO5A1Q9H2Y9 848 aa16.01■□□□□ 0.15
SMARCD3-202ENST00000356800 CRLF2Q9HC73 371 aa16.01■□□□□ 0.15
SMARCD3-202ENST00000356800 GP6Q9HCN6 339 aa16.01■□□□□ 0.15
SMARCD3-202ENST00000356800 POLE4Q9NR33 117 aa16.01■□□□□ 0.15
SMARCD3-202ENST00000356800 PARPBPQ9NWS1 579 aa16.01■□□□□ 0.15
SMARCD3-202ENST00000356800 SSR3Q9UNL2 185 aa16.01■□□□□ 0.15
SMARCD3-202ENST00000356800 SIRT4Q9Y6E7 314 aaPredicted RBP16.01■□□□□ 0.15
SMARCD3-202ENST00000356800 PKD1L2Q7Z442 2459 aa16.01■□□□□ 0.15
SMARCD3-202ENST00000356800 ZGRF1Q86YA3 2104 aa16■□□□□ 0.15
SMARCD3-202ENST00000356800 PNMA8CA0A1B0GUJ8 204 aa16■□□□□ 0.15
SMARCD3-202ENST00000356800 PSMD9O00233 223 aa16■□□□□ 0.15
SMARCD3-202ENST00000356800 WNT11O96014 354 aa16■□□□□ 0.15
SMARCD3-202ENST00000356800 IGHV3-9P01782 118 aa16■□□□□ 0.15
SMARCD3-202ENST00000356800 ZNF823P16415 610 aa16■□□□□ 0.15
SMARCD3-202ENST00000356800 GALP22466 123 aa16■□□□□ 0.15
SMARCD3-202ENST00000356800 GBX2P52951 348 aaPredicted RBP16■□□□□ 0.15
SMARCD3-202ENST00000356800 RPS25P62851 125 aaKnown RBP16■□□□□ 0.15
SMARCD3-202ENST00000356800 SOWAHCQ53LP3 525 aaPredicted RBP16■□□□□ 0.15
SMARCD3-202ENST00000356800 RIPPLY2Q5TAB7 128 aa16■□□□□ 0.15
SMARCD3-202ENST00000356800 SLC18B1Q6NT16 456 aa16■□□□□ 0.15
SMARCD3-202ENST00000356800 RPTNQ6XPR3 784 aa16■□□□□ 0.15
SMARCD3-202ENST00000356800 LINC00346Q8IVM7 164 aa16■□□□□ 0.15
SMARCD3-202ENST00000356800 GPR137CQ8N3F9 429 aa16■□□□□ 0.15
SMARCD3-202ENST00000356800 C9orf106Q8NAJ2 232 aa16■□□□□ 0.15
SMARCD3-202ENST00000356800 KBTBD8Q8NFY9 601 aa16■□□□□ 0.15
SMARCD3-202ENST00000356800 DYNC2LI1Q8TCX1 351 aa16■□□□□ 0.15
SMARCD3-202ENST00000356800 WNT2BQ93097 391 aa16■□□□□ 0.15
SMARCD3-202ENST00000356800 NABP1Q96AH0 204 aa16■□□□□ 0.15
SMARCD3-202ENST00000356800 GMPPAQ96IJ6 420 aaPredicted RBP16■□□□□ 0.15
SMARCD3-202ENST00000356800 GPR35Q9HC97 309 aa16■□□□□ 0.15
SMARCD3-202ENST00000356800 SLC7A10Q9NS82 523 aa16■□□□□ 0.15
SMARCD3-202ENST00000356800 ASF1BQ9NVP2 202 aa16■□□□□ 0.15
SMARCD3-202ENST00000356800 GNG8Q9UK08 70 aa16■□□□□ 0.15
SMARCD3-202ENST00000356800 NBEAQ8NFP9 2946 aa16■□□□□ 0.15
SMARCD3-202ENST00000356800 OGG1O15527 345 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 SS18L1O75177 396 aaPredicted RBP15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 ABHD16AO95870 558 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 TACSTD2P09758 323 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 SIRPAP78324 504 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 MRPL28Q13084 256 aaKnown RBP15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 GUSBP1Q15486 140 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 NSUN5P2Q63ZY6 315 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 DMKNQ6E0U4 476 aaPredicted RBP15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 RTL6Q6ICC9 239 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 THEM6Q8WUY1 208 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 LINC00470Q9BZP3 86 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 DCSTAMPQ9H295 470 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 MRM2Q9UI43 246 aaKnown RBP15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 ST6GALNAC2Q9UJ37 374 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 LHFPL6Q9Y693 200 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 ACACBO00763 2458 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 TRDV1A0A1B0GX56 115 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 METTL15A6NJ78 407 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 HSPB2A8KAH6 182 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 LRRTM2O43300 516 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 HLA-DPB1P04440 258 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 CD1AP06126 327 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 TPOP07202 933 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 FGF9P31371 208 aaPredicted RBP15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 TGFBR1P36897 503 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 TGM4P49221 684 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 KLRB1Q12918 225 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 EIF2B1Q14232 305 aaKnown RBP15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 HSPB2Q16082 182 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 CORO6Q6QEF8 472 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 SEM1Q6ZVN7 128 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 GCNT2Q8N0V5 402 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 FAM57AQ8TBR7 257 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 CPT1CQ8TCG5 803 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 ST7LQ8TDW4 575 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 TMEM203Q969S6 136 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 RNF166Q96A37 237 aaPredicted RBP15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 APH1AQ96BI3 265 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 TRMT61AQ96FX7 289 aaKnown RBP15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 TM9SF2Q99805 663 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 TTYH2Q9BSA4 534 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 ABHD6Q9BV23 337 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 EXOSC4Q9NPD3 245 aaKnown RBP15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 B3GAT2Q9NPZ5 323 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 GLRX2Q9NS18 164 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 ACOXLQ9NUZ1 547 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 CYB5R1Q9UHQ9 305 aa15.99■□□□□ 0.15
SMARCD3-202ENST00000356800 ATRXP46100 2492 aa15.98■□□□□ 0.15
SMARCD3-202ENST00000356800 TPRP12270 2363 aaKnown RBP15.98■□□□□ 0.15
SMARCD3-202ENST00000356800 CD8B2A6NJW9 211 aa15.98■□□□□ 0.15
SMARCD3-202ENST00000356800 KRT8P05787 483 aa15.98■□□□□ 0.15
SMARCD3-202ENST00000356800 OR8G3PP0DMU2 310 aa15.98■□□□□ 0.15
SMARCD3-202ENST00000356800 ZNF84P51523 738 aa15.98■□□□□ 0.15
SMARCD3-202ENST00000356800 FABP5Q01469 135 aa15.98■□□□□ 0.15
SMARCD3-202ENST00000356800 ROR2Q01974 943 aaKnown RBP15.98■□□□□ 0.15
SMARCD3-202ENST00000356800 ROM1Q03395 351 aa15.98■□□□□ 0.15
SMARCD3-202ENST00000356800 CDK5R1Q15078 307 aa15.98■□□□□ 0.15
SMARCD3-202ENST00000356800 TRAM1Q15629 374 aa15.98■□□□□ 0.15
SMARCD3-202ENST00000356800 SGCAQ16586 387 aa15.98■□□□□ 0.15
SMARCD3-202ENST00000356800 CEACAM16Q2WEN9 425 aa15.98■□□□□ 0.15
SMARCD3-202ENST00000356800 RPL22L1Q6P5R6 122 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms