RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 INTS1Q8N201 2190 aaKnown RBP6.16□□□□□ -1.42
VPS13A-201ENST00000355766 TMED7-TICAM2A0A0A6YYA0 188 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 LOC102725191A0A1B0GVB3 256 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 HSPB2A8KAH6 182 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 CENPBD1B2RD01 187 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 FTCDNL1E5RQL4 147 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 PRR23D1E9PI22 279 aaPredicted RBP6.16□□□□□ -1.42
VPS13A-201ENST00000355766 J3QRE1 110 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 KPNA4O00629 521 aaPredicted RBP6.16□□□□□ -1.42
VPS13A-201ENST00000355766 MYL12BO14950 172 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 ZNF354AO60765 605 aaPredicted RBP6.16□□□□□ -1.42
VPS13A-201ENST00000355766 GOSR1O95249 250 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 NUDT14O95848 222 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 BGLAPP02818 100 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 PRR23D2P0DMB1 279 aaPredicted RBP6.16□□□□□ -1.42
VPS13A-201ENST00000355766 ADORA3P0DMS8 318 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 GAAP10253 952 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 NR2C1P13056 603 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 IDUAP35475 653 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 RPS19P39019 145 aaKnown RBP6.16□□□□□ -1.42
VPS13A-201ENST00000355766 MASP1P48740 699 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 CYB561P49447 251 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 DAP3P51398 398 aaKnown RBP6.16□□□□□ -1.42
VPS13A-201ENST00000355766 DSCR4P56555 118 aaPredicted RBP6.16□□□□□ -1.42
VPS13A-201ENST00000355766 CD83Q01151 205 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 HSF2Q03933 536 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 ZP4Q12836 540 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 FOXL1Q12952 345 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 MLLT11Q13015 90 aaPredicted RBP6.16□□□□□ -1.42
VPS13A-201ENST00000355766 MRPL28Q13084 256 aaKnown RBP6.16□□□□□ -1.42
VPS13A-201ENST00000355766 HSPB2Q16082 182 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 CNPY1Q3B7I2 92 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 ALG10Q5BKT4 473 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 CLEC12AQ5QGZ9 265 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 TMEM236Q5W0B7 351 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 C16orf47Q6ZP98 133 aaPredicted RBP6.16□□□□□ -1.42
VPS13A-201ENST00000355766 FAM122BQ7Z309 247 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 P2RY8Q86VZ1 359 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 ADGRG3Q86Y34 549 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 PLCZ1Q86YW0 608 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 ERI1Q8IV48 349 aaKnown RBP6.16□□□□□ -1.42
VPS13A-201ENST00000355766 LRRC75A-AS1Q8N1F1 130 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 TMEM156Q8N614 296 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 IQCF1Q8N6M8 205 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 LRRC75AQ8NAA5 344 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 GATSQ8NAP1 163 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 OR2M3Q8NG83 312 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 OR4K17Q8NGC6 315 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 OR9Q1Q8NGQ5 310 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 OR5J2Q8NH18 312 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 IL17DQ8TAD2 202 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 FNDC8Q8TC99 324 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 DUSP19Q8WTR2 217 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 SH3YL1Q96HL8 342 aaPredicted RBP6.16□□□□□ -1.42
VPS13A-201ENST00000355766 Q96MF0 132 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 PTDSS2Q9BVG9 487 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 NMNAT2Q9BZQ4 307 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 CCDC90BQ9GZT6 254 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 CDCP1Q9H5V8 836 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 DNAJC27Q9NZQ0 273 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 H2AFY2Q9P0M6 372 aaPredicted RBP6.16□□□□□ -1.42
VPS13A-201ENST00000355766 ERVK-18Q9QC07 812 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 B4GALT7Q9UBV7 327 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 TRAPPC4Q9Y296 219 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 LSM2Q9Y333 95 aaKnown RBP6.16□□□□□ -1.42
VPS13A-201ENST00000355766 TMED7Q9Y3B3 224 aa6.16□□□□□ -1.42
VPS13A-201ENST00000355766 TRAV27A0A087WT01 109 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 A6NIZ1 184 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 NPIPA2E9PIF3 369 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 NPIPA3F8WFD2 350 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 KLRC4-KLRK1H3BQV0 150 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 CBR3O75828 277 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 VAMP5O95183 116 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 CH25HO95992 272 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 IGFBP1P08833 259 aaPredicted RBP6.15□□□□□ -1.42
VPS13A-201ENST00000355766 NAT1P18440 290 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 CCNA2P20248 432 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 SLC2A5P22732 501 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 PSMA1P25786 263 aaKnown RBP6.15□□□□□ -1.42
VPS13A-201ENST00000355766 GTF2E2P29084 291 aaKnown RBP6.15□□□□□ -1.42
VPS13A-201ENST00000355766 C21orf33P30042 268 aaPredicted RBP6.15□□□□□ -1.42
VPS13A-201ENST00000355766 SRD5A2P31213 254 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 RPL4P36578 427 aaKnown RBP6.15□□□□□ -1.42
VPS13A-201ENST00000355766 ASCL1P50553 236 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 WNT4P56705 351 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 TAS2R43P59537 309 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 RAP1BP61224 184 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 ACTA2P62736 377 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 RAP1AP62834 184 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 ACTG2P63267 376 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 TUBA1BP68363 451 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 ITGADQ13349 1161 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 GPR50Q13585 617 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 SPHARQ15513 63 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 TIGD6Q17RP2 521 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 FBXL19-AS1Q494R0 122 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 GXYLT1Q4G148 440 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 ZNF362Q5T0B9 420 aaPredicted RBP6.15□□□□□ -1.42
VPS13A-201ENST00000355766 RIPPLY2Q5TAB7 128 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 TIGD3Q6B0B8 471 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms