RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 POLE4Q9NR33 117 aa15.27■□□□□ 0.04
VPS13B-201ENST00000355155 PAQR5Q9NXK6 330 aaPredicted RBP15.27■□□□□ 0.04
VPS13B-201ENST00000355155 IKZF2Q9UKS7 526 aa15.27■□□□□ 0.04
VPS13B-201ENST00000355155 FSTP19883 344 aa15.27■□□□□ 0.03
VPS13B-201ENST00000355155 CLDN17P56750 224 aa15.27■□□□□ 0.03
VPS13B-201ENST00000355155 CLDN20P56880 219 aa15.27■□□□□ 0.03
VPS13B-201ENST00000355155 CARD18P57730 90 aa15.27■□□□□ 0.03
VPS13B-201ENST00000355155 LRRTM1Q86UE6 522 aa15.27■□□□□ 0.03
VPS13B-201ENST00000355155 GPR148Q8TDV2 347 aa15.27■□□□□ 0.03
VPS13B-201ENST00000355155 COX4I2Q96KJ9 171 aa15.27■□□□□ 0.03
VPS13B-201ENST00000355155 GFI1Q99684 422 aa15.27■□□□□ 0.03
VPS13B-201ENST00000355155 ZNF552Q9H707 407 aaPredicted RBP15.27■□□□□ 0.03
VPS13B-201ENST00000355155 MOB1AQ9H8S9 216 aa15.27■□□□□ 0.03
VPS13B-201ENST00000355155 NOX4Q9NPH5 578 aa15.27■□□□□ 0.03
VPS13B-201ENST00000355155 TIGARQ9NQ88 270 aa15.27■□□□□ 0.03
VPS13B-201ENST00000355155 CYSLTR2Q9NS75 346 aa15.27■□□□□ 0.03
VPS13B-201ENST00000355155 LHFPL6Q9Y693 200 aa15.27■□□□□ 0.03
VPS13B-201ENST00000355155 ACOD1A6NK06 481 aa15.26■□□□□ 0.03
VPS13B-201ENST00000355155 EPXP11678 715 aa15.26■□□□□ 0.03
VPS13B-201ENST00000355155 ZNF708P17019 499 aa15.26■□□□□ 0.03
VPS13B-201ENST00000355155 CAMK2DQ13557 499 aa15.26■□□□□ 0.03
VPS13B-201ENST00000355155 WIPI1Q5MNZ9 446 aaPredicted RBP15.26■□□□□ 0.03
VPS13B-201ENST00000355155 LRRN1Q6UXK5 716 aa15.26■□□□□ 0.03
VPS13B-201ENST00000355155 KRT77Q7Z794 578 aa15.26■□□□□ 0.03
VPS13B-201ENST00000355155 LRRC28Q86X40 367 aaPredicted RBP15.26■□□□□ 0.03
VPS13B-201ENST00000355155 KCNJ15Q99712 375 aa15.26■□□□□ 0.03
VPS13B-201ENST00000355155 WACQ9BTA9 647 aa15.26■□□□□ 0.03
VPS13B-201ENST00000355155 C1orf198Q9H425 327 aa15.26■□□□□ 0.03
VPS13B-201ENST00000355155 PNRC2Q9NPJ4 139 aaKnown RBP15.26■□□□□ 0.03
VPS13B-201ENST00000355155 TRABD2BA6NFA1 517 aa15.26■□□□□ 0.03
VPS13B-201ENST00000355155 KLRC4-KLRK1H3BQV0 150 aa15.26■□□□□ 0.03
VPS13B-201ENST00000355155 TPPPO94811 219 aa15.26■□□□□ 0.03
VPS13B-201ENST00000355155 OPN1LWP04000 364 aa15.26■□□□□ 0.03
VPS13B-201ENST00000355155 CAV3P56539 151 aa15.26■□□□□ 0.03
VPS13B-201ENST00000355155 CLDN18P56856 261 aa15.26■□□□□ 0.03
VPS13B-201ENST00000355155 DCXRQ7Z4W1 244 aa15.26■□□□□ 0.03
VPS13B-201ENST00000355155 OR10S1Q8NGN2 331 aa15.26■□□□□ 0.03
VPS13B-201ENST00000355155 NABP1Q96AH0 204 aa15.26■□□□□ 0.03
VPS13B-201ENST00000355155 UCN2Q96RP3 112 aa15.26■□□□□ 0.03
VPS13B-201ENST00000355155 RERGLQ9H628 205 aa15.26■□□□□ 0.03
VPS13B-201ENST00000355155 NPIPA2E9PIF3 369 aa15.25■□□□□ 0.03
VPS13B-201ENST00000355155 NPIPA3F8WFD2 350 aa15.25■□□□□ 0.03
VPS13B-201ENST00000355155 NCR1O76036 304 aa15.25■□□□□ 0.03
VPS13B-201ENST00000355155 WNT11O96014 354 aa15.25■□□□□ 0.03
VPS13B-201ENST00000355155 PNPP00491 289 aa15.25■□□□□ 0.03
VPS13B-201ENST00000355155 QDPRP09417 244 aa15.25■□□□□ 0.03
VPS13B-201ENST00000355155 NPR2P20594 1047 aa15.25■□□□□ 0.03
VPS13B-201ENST00000355155 CSNK1A1P48729 337 aa15.25■□□□□ 0.03
VPS13B-201ENST00000355155 RIPPLY2Q5TAB7 128 aa15.25■□□□□ 0.03
VPS13B-201ENST00000355155 OR10D3Q8NH80 312 aa15.25■□□□□ 0.03
VPS13B-201ENST00000355155 DDX28Q9NUL7 540 aaKnown RBP15.25■□□□□ 0.03
VPS13B-201ENST00000355155 FAM206AQ9NX38 181 aa15.25■□□□□ 0.03
VPS13B-201ENST00000355155 WDR87Q6ZQQ6 2873 aa15.25■□□□□ 0.03
VPS13B-201ENST00000355155 PTTG1O95997 202 aa15.25■□□□□ 0.03
VPS13B-201ENST00000355155 ACTL6AO96019 429 aa15.25■□□□□ 0.03
VPS13B-201ENST00000355155 CD46P15529 392 aa15.25■□□□□ 0.03
VPS13B-201ENST00000355155 POU3F2P20265 443 aaPredicted RBP15.25■□□□□ 0.03
VPS13B-201ENST00000355155 ACHEP22303 614 aa15.25■□□□□ 0.03
VPS13B-201ENST00000355155 RPS27P42677 84 aaKnown RBP15.25■□□□□ 0.03
VPS13B-201ENST00000355155 STEAP3Q658P3 488 aa15.25■□□□□ 0.03
VPS13B-201ENST00000355155 GPAT4Q86UL3 456 aa15.25■□□□□ 0.03
VPS13B-201ENST00000355155 TMEM251Q8N6I4 163 aa15.25■□□□□ 0.03
VPS13B-201ENST00000355155 ZNF385AQ96PM9 386 aaKnown RBP15.25■□□□□ 0.03
VPS13B-201ENST00000355155 ING1Q9UK53 422 aaPredicted RBP15.25■□□□□ 0.03
VPS13B-201ENST00000355155 FOXJ3Q9UPW0 622 aa15.25■□□□□ 0.03
VPS13B-201ENST00000355155 PSMD9O00233 223 aa15.25■□□□□ 0.03
VPS13B-201ENST00000355155 TCEA1P23193 301 aaKnown RBP15.25■□□□□ 0.03
VPS13B-201ENST00000355155 TGIF1Q15583 401 aa15.25■□□□□ 0.03
VPS13B-201ENST00000355155 NRN1LQ496H8 165 aa15.25■□□□□ 0.03
VPS13B-201ENST00000355155 Q6ZSR3 168 aa15.25■□□□□ 0.03
VPS13B-201ENST00000355155 OR10H5Q8NGA6 315 aa15.25■□□□□ 0.03
VPS13B-201ENST00000355155 WDFY3Q8IZQ1 3526 aa15.24■□□□□ 0.03
VPS13B-201ENST00000355155 IGFBP3P17936 291 aaPredicted RBP15.24■□□□□ 0.03
VPS13B-201ENST00000355155 PSMD7P51665 324 aa15.24■□□□□ 0.03
VPS13B-201ENST00000355155 CLN3Q13286 438 aa15.24■□□□□ 0.03
VPS13B-201ENST00000355155 ZNF704Q6ZNC4 412 aaPredicted RBP15.24■□□□□ 0.03
VPS13B-201ENST00000355155 PPP1R14BQ96C90 147 aa15.24■□□□□ 0.03
VPS13B-201ENST00000355155 SLAMF6Q96DU3 332 aa15.24■□□□□ 0.03
VPS13B-201ENST00000355155 LINC00470Q9BZP3 86 aa15.24■□□□□ 0.03
VPS13B-201ENST00000355155 NELFAQ9H3P2 528 aa15.24■□□□□ 0.03
VPS13B-201ENST00000355155 ZDHHC11Q9H8X9 412 aa15.24■□□□□ 0.03
VPS13B-201ENST00000355155 SPATA2Q9UM82 520 aa15.24■□□□□ 0.03
VPS13B-201ENST00000355155 AIPO00170 330 aa15.24■□□□□ 0.03
VPS13B-201ENST00000355155 RPP14O95059 124 aaKnown RBP15.24■□□□□ 0.03
VPS13B-201ENST00000355155 MEOX1P50221 254 aa15.24■□□□□ 0.03
VPS13B-201ENST00000355155 NOVA1P51513 510 aaKnown RBP15.24■□□□□ 0.03
VPS13B-201ENST00000355155 OR10A3P58181 314 aa15.24■□□□□ 0.03
VPS13B-201ENST00000355155 MRPS34P82930 218 aaKnown RBP15.24■□□□□ 0.03
VPS13B-201ENST00000355155 MFGE8Q08431 387 aaPredicted RBP15.24■□□□□ 0.03
VPS13B-201ENST00000355155 PHYHD1Q5SRE7 291 aa15.24■□□□□ 0.03
VPS13B-201ENST00000355155 GDF2Q9UK05 429 aaPredicted RBP15.24■□□□□ 0.03
VPS13B-201ENST00000355155 ARGFXA6NJG6 315 aa15.23■□□□□ 0.03
VPS13B-201ENST00000355155 ZNF891A8MT65 544 aaPredicted RBP15.23■□□□□ 0.03
VPS13B-201ENST00000355155 EIF1AYO14602 144 aaKnown RBP15.23■□□□□ 0.03
VPS13B-201ENST00000355155 RGS5O15539 181 aa15.23■□□□□ 0.03
VPS13B-201ENST00000355155 HPGDSO60760 199 aa15.23■□□□□ 0.03
VPS13B-201ENST00000355155 BAIAP2L2Q6UXY1 529 aa15.23■□□□□ 0.03
VPS13B-201ENST00000355155 STAC2Q6ZMT1 411 aa15.23■□□□□ 0.03
VPS13B-201ENST00000355155 FAM109AQ8N4B1 249 aa15.23■□□□□ 0.03
VPS13B-201ENST00000355155 SPEGQ15772 3267 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms