RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 BEND2Q8NDZ0 799 aa12□□□□□ -0.49
IFT88-202ENST00000351808 TMEM239Q8WW34 195 aa12□□□□□ -0.49
IFT88-202ENST00000351808 OR14J1Q9UGF5 321 aa12□□□□□ -0.49
IFT88-202ENST00000351808 PCDHB8Q9UN66 801 aa12□□□□□ -0.49
IFT88-202ENST00000351808 STARD10Q9Y365 291 aa12□□□□□ -0.49
IFT88-202ENST00000351808 PCYT1BQ9Y5K3 369 aaPredicted RBP12□□□□□ -0.49
IFT88-202ENST00000351808 PUS1Q9Y606 427 aaKnown RBP eCLIP12□□□□□ -0.49
IFT88-202ENST00000351808 URGCP-MRPS24S4R325 110 aa12□□□□□ -0.49
IFT88-202ENST00000351808 A0A1B0GTH9 108 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 A0A1W2PPC1 479 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 OR13C7P0DN81 318 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 PBX2P40425 430 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 COTL1Q14019 142 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 SSPNQ14714 243 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 ELOCQ15369 112 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 UBE2V2Q15819 145 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 C2orf76Q3KRA6 126 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 COL13A1Q5TAT6 717 aaPredicted RBP11.99□□□□□ -0.49
IFT88-202ENST00000351808 AWAT2Q6E213 333 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 OR2T2Q6IF00 324 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 ACOT4Q8N9L9 421 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 OR5R1Q8NH85 324 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 ZNF563Q8TA94 476 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 BPIFA2Q96DR5 249 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 LMF1Q96S06 567 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 LGR4Q9BXB1 951 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 USP36Q9P275 1121 aaKnown RBP11.99□□□□□ -0.49
IFT88-202ENST00000351808 IL36AQ9UHA7 158 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 LAMP5Q9UJQ1 280 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 A0A1B0GVT2 93 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 SMCO3A2RU48 225 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 SRPX2O60687 465 aaPredicted RBP11.99□□□□□ -0.49
IFT88-202ENST00000351808 C1orf105O95561 183 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 PTBP3O95758 552 aaKnown RBP11.99□□□□□ -0.49
IFT88-202ENST00000351808 TRGC2P03986 189 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 SPARCP09486 303 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 C8orf89P0DMQ9 161 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 TAS2R38P59533 333 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 RAB1AP62820 205 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 OR4C11Q6IEV9 310 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 TRAPPC5Q8IUR0 188 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 MUCL1Q96DR8 90 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 THOC3Q96J01 351 aaKnown RBP11.99□□□□□ -0.49
IFT88-202ENST00000351808 NOL4LQ96MY1 436 aaPredicted RBP11.99□□□□□ -0.49
IFT88-202ENST00000351808 TNFRSF13CQ96RJ3 184 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 TMEM208Q9BTX3 173 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 EPHX3Q9H6B9 360 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 C19orf12Q9NSK7 152 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 RNF181Q9P0P0 153 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 FBXL21Q9UKT6 434 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 ICAM5Q9UMF0 924 aa11.99□□□□□ -0.49
IFT88-202ENST00000351808 HEATR5BQ9P2D3 2071 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 A0A087WV62 115 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 A0A1W2PS29 197 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 NME2P1O60361 137 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 STC2O76061 302 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 IL2RAP01589 272 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 SERPINA4P29622 427 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 SNCAP37840 140 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 PDX1P52945 283 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 TOMM34Q15785 309 aaPredicted RBP11.98□□□□□ -0.49
IFT88-202ENST00000351808 MIDNQ504T8 468 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 GGNBP1Q5YKI7 109 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 OR10AC1Q8NH08 325 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 IL17FQ96PD4 163 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 SCRT1Q9BWW7 348 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 SGPP1Q9BX95 441 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 SLC5A7Q9GZV3 580 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 CWH43Q9H720 699 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 HS3ST3B1Q9Y662 390 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 ELOA3CA0A087WX78 387 aaPredicted RBP11.98□□□□□ -0.49
IFT88-202ENST00000351808 CCDC187A0A096LP49 1063 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 EIF1AYO14602 144 aaKnown RBP11.98□□□□□ -0.49
IFT88-202ENST00000351808 DLEU1O43261 78 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 SOCS5O75159 536 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 F13BP05160 661 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 HMGB2P26583 209 aaKnown RBP11.98□□□□□ -0.49
IFT88-202ENST00000351808 MAP3K8P41279 467 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 EIF1AXP47813 144 aaKnown RBP11.98□□□□□ -0.49
IFT88-202ENST00000351808 LSSP48449 732 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 ADAM8P78325 824 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 SLC7A9P82251 487 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 DUSP2Q05923 314 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 SMAD4Q13485 552 aaKnown RBP11.98□□□□□ -0.49
IFT88-202ENST00000351808 ZNHIT3Q15649 155 aaPredicted RBP11.98□□□□□ -0.49
IFT88-202ENST00000351808 OR6K6Q8NGW6 343 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 RNF166Q96A37 237 aaPredicted RBP11.98□□□□□ -0.49
IFT88-202ENST00000351808 LRFN5Q96NI6 719 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 LYSMD1Q96S90 227 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 G6PC3Q9BUM1 346 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 OR52A5Q9H2C5 316 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 KCNJ16Q9NPI9 418 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 FAM212BQ9NTI7 297 aaPredicted RBP11.98□□□□□ -0.49
IFT88-202ENST00000351808 YBX2Q9Y2T7 364 aaKnown RBP11.98□□□□□ -0.49
IFT88-202ENST00000351808 OR51B4Q9Y5P0 310 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 SLCO1B1Q9Y6L6 691 aa11.98□□□□□ -0.49
IFT88-202ENST00000351808 LEFTY2O00292 366 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 RAMP1O60894 148 aa11.97□□□□□ -0.49
IFT88-202ENST00000351808 HIST1H1CP16403 213 aaKnown RBP11.97□□□□□ -0.49
IFT88-202ENST00000351808 FGF7P21781 194 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms