RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 AGAP6Q5VW22 663 aa11.02□□□□□ -0.64
SMAD9-201ENST00000350148 POGLUT1Q8NBL1 392 aa11.02□□□□□ -0.64
SMAD9-201ENST00000350148 OR4C3Q8NH37 302 aa11.02□□□□□ -0.64
SMAD9-201ENST00000350148 RHNO1Q9BSD3 238 aa11.02□□□□□ -0.64
SMAD9-201ENST00000350148 SLCO5A1Q9H2Y9 848 aa11.02□□□□□ -0.64
SMAD9-201ENST00000350148 BHLHE40O14503 412 aa11.02□□□□□ -0.65
SMAD9-201ENST00000350148 TO15178 435 aa11.02□□□□□ -0.65
SMAD9-201ENST00000350148 SELENOFO60613 162 aa11.02□□□□□ -0.65
SMAD9-201ENST00000350148 UBL3O95164 117 aa11.02□□□□□ -0.65
SMAD9-201ENST00000350148 IGFBP1P08833 259 aaPredicted RBP11.02□□□□□ -0.65
SMAD9-201ENST00000350148 TMPRSS9Q7Z410 1059 aa11.02□□□□□ -0.65
SMAD9-201ENST00000350148 OR6M1Q8NGM8 313 aa11.02□□□□□ -0.65
SMAD9-201ENST00000350148 FAM131CQ96AQ9 280 aa11.02□□□□□ -0.65
SMAD9-201ENST00000350148 LHX9Q9NQ69 397 aa11.02□□□□□ -0.65
SMAD9-201ENST00000350148 COA3Q9Y2R0 106 aaPredicted RBP11.02□□□□□ -0.65
SMAD9-201ENST00000350148 HRH3Q9Y5N1 445 aa11.02□□□□□ -0.65
SMAD9-201ENST00000350148 S100A8P05109 93 aa11.02□□□□□ -0.65
SMAD9-201ENST00000350148 PET100P0DJ07 73 aa11.02□□□□□ -0.65
SMAD9-201ENST00000350148 FOXF1Q12946 379 aa11.02□□□□□ -0.65
SMAD9-201ENST00000350148 MFAP5Q13361 173 aa11.02□□□□□ -0.65
SMAD9-201ENST00000350148 SLC10A1Q14973 349 aa11.02□□□□□ -0.65
SMAD9-201ENST00000350148 BCDIN3DQ7Z5W3 292 aaKnown RBP11.02□□□□□ -0.65
SMAD9-201ENST00000350148 SERPINA12Q8IW75 414 aa11.02□□□□□ -0.65
SMAD9-201ENST00000350148 TMEM99Q8N816 258 aa11.02□□□□□ -0.65
SMAD9-201ENST00000350148 SNX18Q96RF0 628 aa11.02□□□□□ -0.65
SMAD9-201ENST00000350148 TAS2R16Q9NYV7 291 aa11.02□□□□□ -0.65
SMAD9-201ENST00000350148 HRO43593 1189 aa11.02□□□□□ -0.65
SMAD9-201ENST00000350148 AKAIN1P0CW23 69 aa11.02□□□□□ -0.65
SMAD9-201ENST00000350148 HTR5AP47898 357 aa11.02□□□□□ -0.65
SMAD9-201ENST00000350148 IDH3GP51553 393 aaPredicted RBP11.02□□□□□ -0.65
SMAD9-201ENST00000350148 MVDP53602 400 aa11.02□□□□□ -0.65
SMAD9-201ENST00000350148 LTBQ06643 244 aa11.02□□□□□ -0.65
SMAD9-201ENST00000350148 ZXDCQ2QGD7 858 aaPredicted RBP11.02□□□□□ -0.65
SMAD9-201ENST00000350148 LANCL3Q6ZV70 420 aa11.02□□□□□ -0.65
SMAD9-201ENST00000350148 NRARPQ7Z6K4 114 aa11.02□□□□□ -0.65
SMAD9-201ENST00000350148 ZNF679Q8IYX0 411 aa11.02□□□□□ -0.65
SMAD9-201ENST00000350148 SAP25Q8TEE9 199 aa11.02□□□□□ -0.65
SMAD9-201ENST00000350148 HPGDSO60760 199 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 DIRAS3O95661 229 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 FGF5P12034 268 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 GCH1P30793 250 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 POU3F4P49335 361 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 IGLV3-21P80748 117 aaPredicted RBP11.01□□□□□ -0.65
SMAD9-201ENST00000350148 DOK3Q7L591 496 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.01□□□□□ -0.65
SMAD9-201ENST00000350148 SLC22A24Q8N4F4 322 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 SIRT6Q8N6T7 355 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 SGK3Q96BR1 496 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 SARAFQ96BY9 339 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 NECAB3Q96P71 396 aaPredicted RBP11.01□□□□□ -0.65
SMAD9-201ENST00000350148 OPALINQ96PE5 141 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 UNKLQ9H9P5 680 aaKnown RBP11.01□□□□□ -0.65
SMAD9-201ENST00000350148 ASF1BQ9NVP2 202 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 MGAT4CQ9UBM8 478 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 GPR160Q9UJ42 338 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 LHX6Q9UPM6 363 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 EXO1Q9UQ84 846 aaKnown RBP11.01□□□□□ -0.65
SMAD9-201ENST00000350148 CYTIPO60759 359 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 BPNT1O95861 308 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 SEMG1P04279 462 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 SLC23A3Q6PIS1 610 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 TMEM185AQ8NFB2 350 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 PPP1R35Q8TAP8 253 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 PTPMT1Q8WUK0 201 aaPredicted RBP11.01□□□□□ -0.65
SMAD9-201ENST00000350148 APH1AQ96BI3 265 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 SLC25A18Q9H1K4 315 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 C19orf12Q9NSK7 152 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 P4HTMQ9NXG6 502 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 HAO2Q9NYQ3 351 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 CREBL2O60519 120 aaPredicted RBP11.01□□□□□ -0.65
SMAD9-201ENST00000350148 HRGP04196 525 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 GLYR1Q49A26 553 aaPredicted RBP11.01□□□□□ -0.65
SMAD9-201ENST00000350148 CDNFQ49AH0 187 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 PXKQ7Z7A4 578 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 OR2V1Q8NHB1 315 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 CPNE4Q96A23 557 aaPredicted RBP11.01□□□□□ -0.65
SMAD9-201ENST00000350148 FBXL3Q9UKT7 428 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 C4orf47A7E2U8 309 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 AGTR1P30556 359 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 RBMXP38159 391 aaKnown RBP11.01□□□□□ -0.65
SMAD9-201ENST00000350148 TRIP6Q15654 476 aaKnown RBP11.01□□□□□ -0.65
SMAD9-201ENST00000350148 ZNF658BQ4V348 819 aaPredicted RBP11.01□□□□□ -0.65
SMAD9-201ENST00000350148 FAM57BQ71RH2 274 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 GTPBP8Q8N3Z3 284 aaPredicted RBP11.01□□□□□ -0.65
SMAD9-201ENST00000350148 SMIM19Q96E16 107 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 PBDC1Q9BVG4 233 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 STEAP1Q9UHE8 339 aa11.01□□□□□ -0.65
SMAD9-201ENST00000350148 TEX13DA0A0J9YY54 714 aaPredicted RBP11□□□□□ -0.65
SMAD9-201ENST00000350148 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11□□□□□ -0.65
SMAD9-201ENST00000350148 DCDC2BA2VCK2 349 aa11□□□□□ -0.65
SMAD9-201ENST00000350148 CTDSP2O14595 271 aa11□□□□□ -0.65
SMAD9-201ENST00000350148 OPN1LWP04000 364 aa11□□□□□ -0.65
SMAD9-201ENST00000350148 ARL3P36405 182 aa11□□□□□ -0.65
SMAD9-201ENST00000350148 NUBP1P53384 320 aa11□□□□□ -0.65
SMAD9-201ENST00000350148 METTL11BQ5VVY1 283 aa11□□□□□ -0.65
SMAD9-201ENST00000350148 DCXRQ7Z4W1 244 aa11□□□□□ -0.65
SMAD9-201ENST00000350148 MRPL41Q8IXM3 137 aaKnown RBP11□□□□□ -0.65
SMAD9-201ENST00000350148 OR51T1Q8NGJ9 327 aa11□□□□□ -0.65
SMAD9-201ENST00000350148 OR5H2Q8NGV7 314 aa11□□□□□ -0.65
SMAD9-201ENST00000350148 NINJ1Q92982 152 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms