RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 DNASE1L1P49184 302 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 RIDAP52758 137 aaKnown RBP6.16□□□□□ -1.42
TRIM55-203ENST00000350034 SUCLG1P53597 346 aaKnown RBP6.16□□□□□ -1.42
TRIM55-203ENST00000350034 SCN1BQ07699 218 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 FOXO1Q12778 655 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 EIF2B1Q14232 305 aaKnown RBP6.16□□□□□ -1.42
TRIM55-203ENST00000350034 P2RY14Q15391 338 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 TRIP6Q15654 476 aaKnown RBP6.16□□□□□ -1.42
TRIM55-203ENST00000350034 OTPQ5XKR4 325 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 KCTD18Q6PI47 426 aaPredicted RBP6.16□□□□□ -1.42
TRIM55-203ENST00000350034 CCBE1Q6UXH8 406 aaPredicted RBP6.16□□□□□ -1.42
TRIM55-203ENST00000350034 LRRN1Q6UXK5 716 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 STAC2Q6ZMT1 411 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 FOXL2NBQ6ZUU3 175 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 SYT9Q86SS6 491 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 CATSPERDQ86XM0 798 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 GLB1L2Q8IW92 636 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 CADM3Q8N126 398 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 OR8H2Q8N162 312 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 OR4M1Q8NGD0 313 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 OR5H6Q8NGV6 325 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 OR10AC1Q8NH08 325 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 TRMT10AQ8TBZ6 339 aaKnown RBP6.16□□□□□ -1.42
TRIM55-203ENST00000350034 GPR148Q8TDV2 347 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 RNF133Q8WVZ7 376 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 KCNE4Q8WWG9 221 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 C11orf40Q8WZ69 217 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 TMEM54Q969K7 222 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 FOXN4Q96NZ1 517 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 IP6K3Q96PC2 410 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 PIGQQ9BRB3 760 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 EMC6Q9BV81 110 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 COMMD4Q9H0A8 199 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 DEPPQ9NTK1 212 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 EXTL2Q9UBQ6 330 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 CYB5R1Q9UHQ9 305 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 DKKL1Q9UK85 242 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 SPATA2Q9UM82 520 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 AK6Q9Y3D8 172 aaKnown RBP6.16□□□□□ -1.42
TRIM55-203ENST00000350034 PCDHGA9Q9Y5G4 932 aaKnown RBP6.16□□□□□ -1.42
TRIM55-203ENST00000350034 R4GMQ9 66 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 KIF26BQ2KJY2 2108 aa6.16□□□□□ -1.42
TRIM55-203ENST00000350034 EP300Q09472 2414 aaPredicted RBP6.15□□□□□ -1.42
TRIM55-203ENST00000350034 PINLYPA6NC86 204 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 TRABD2BA6NFA1 517 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 GJE1A6NN92 205 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 FAM25AB3EWG3 89 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 FAM25CB3EWG5 89 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 FAM25GB3EWG6 89 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 AIPO00170 330 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 SSX4O60224 188 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 SLC43A1O75387 559 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 VAMP5O95183 116 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 ISG15P05161 165 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 RFPL3SP0C7P2 107 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 FAM157BP0CG42 384 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 SNRPBP14678 240 aaKnown RBP6.15□□□□□ -1.42
TRIM55-203ENST00000350034 ZNF43P17038 809 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 ADRA2CP18825 462 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 TCEA1P23193 301 aaKnown RBP6.15□□□□□ -1.42
TRIM55-203ENST00000350034 CD82P27701 267 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 RBMS1P29558 406 aaKnown RBP6.15□□□□□ -1.42
TRIM55-203ENST00000350034 CD96P40200 585 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 MAGEB1P43366 347 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 CD97P48960 835 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 CYB561P49447 251 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 MMP16P51512 607 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 CSNK2A1P68400 391 aaPredicted RBP6.15□□□□□ -1.42
TRIM55-203ENST00000350034 MFGE8Q08431 387 aaPredicted RBP6.15□□□□□ -1.42
TRIM55-203ENST00000350034 MFAP5Q13361 173 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 PYDC2Q56P42 97 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 DCAF10Q5QP82 559 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 C10orf128Q5T292 105 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 RAET1LQ5VY80 246 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 TMEM225Q6GV28 225 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 ASPHD2Q6ICH7 369 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 PYHIN1Q6K0P9 492 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 LRFN4Q6PJG9 635 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 CREB3L2Q70SY1 520 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 RHOUQ7L0Q8 258 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 DCXRQ7Z4W1 244 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 KRT77Q7Z794 578 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 DTX1Q86Y01 620 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 TMEM123Q8N131 208 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 ZNF676Q8N7Q3 588 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 SAMD12Q8N8I0 201 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 ZIC4Q8N9L1 334 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 OR10S1Q8NGN2 331 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 SNRNP27Q8WVK2 155 aaKnown RBP6.15□□□□□ -1.42
TRIM55-203ENST00000350034 ADAMTS14Q8WXS8 1223 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 HTRA1Q92743 480 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 NKD1Q969G9 470 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 ORAI1Q96D31 301 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 THOC3Q96J01 351 aaKnown RBP6.15□□□□□ -1.42
TRIM55-203ENST00000350034 ADGRG7Q96K78 797 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 NAA11Q9BSU3 229 aaPredicted RBP6.15□□□□□ -1.42
TRIM55-203ENST00000350034 MRI1Q9BV20 369 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 SF3B5Q9BWJ5 86 aaKnown RBP6.15□□□□□ -1.42
TRIM55-203ENST00000350034 G6PC2Q9NQR9 355 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 RHBDL2Q9NX52 303 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms