RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 ZNHIT1O43257 154 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 MPC2O95563 127 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 BDH1Q02338 343 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 MYBPHQ13203 477 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 SLC25A25Q6KCM7 469 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 ALKAL2Q6UX46 152 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 ZNF782Q6ZMW2 699 aaPredicted RBP12.47□□□□□ -0.41
TRIM4-201ENST00000349062 GLB1L2Q8IW92 636 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 AGBL5Q8NDL9 886 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 OR10H5Q8NGA6 315 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 NAT6Q93015 286 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 FAM46BQ96A09 425 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 WDR77Q9BQA1 342 aaPredicted RBP12.47□□□□□ -0.41
TRIM4-201ENST00000349062 NMNAT2Q9BZQ4 307 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 CYSLTR2Q9NS75 346 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 RCE1Q9Y256 329 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 MAB21L2Q9Y586 359 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 C9J4A7 227 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 KDM4BO94953 1096 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 ALOX5APP20292 161 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 SGCBQ16585 318 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 ST3GAL2Q16842 350 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 KMT5CQ86Y97 462 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 ABHD6Q9BV23 337 aa12.47□□□□□ -0.41
TRIM4-201ENST00000349062 ELF5Q9UKW6 265 aaPredicted RBP12.47□□□□□ -0.41
TRIM4-201ENST00000349062 LOC100509620A0A075B734 347 aa12.46□□□□□ -0.41
TRIM4-201ENST00000349062 OGG1O15527 345 aa12.46□□□□□ -0.41
TRIM4-201ENST00000349062 TRAPPC6AO75865 159 aa12.46□□□□□ -0.41
TRIM4-201ENST00000349062 PLATP00750 562 aa12.46□□□□□ -0.41
TRIM4-201ENST00000349062 LCN1P31025 176 aa12.46□□□□□ -0.41
TRIM4-201ENST00000349062 TMEM69Q5SWH9 247 aa12.46□□□□□ -0.41
TRIM4-201ENST00000349062 PLXDC2Q6UX71 529 aa12.46□□□□□ -0.41
TRIM4-201ENST00000349062 STAC2Q6ZMT1 411 aa12.46□□□□□ -0.41
TRIM4-201ENST00000349062 SYS1Q8N2H4 156 aa12.46□□□□□ -0.41
TRIM4-201ENST00000349062 OR5L2Q8NGL0 311 aa12.46□□□□□ -0.41
TRIM4-201ENST00000349062 EXOSC3Q9NQT5 275 aaKnown RBP12.46□□□□□ -0.41
TRIM4-201ENST00000349062 SDHAF3Q9NRP4 125 aa12.46□□□□□ -0.41
TRIM4-201ENST00000349062 MRPL22Q9NWU5 206 aaKnown RBP12.46□□□□□ -0.41
TRIM4-201ENST00000349062 R4GN57 208 aa12.46□□□□□ -0.41
TRIM4-201ENST00000349062 SLC22A23A1A5C7 686 aa12.46□□□□□ -0.41
TRIM4-201ENST00000349062 D6RAR5 112 aa12.46□□□□□ -0.41
TRIM4-201ENST00000349062 HPXP02790 462 aa12.46□□□□□ -0.41
TRIM4-201ENST00000349062 FAM157BP0CG42 384 aa12.46□□□□□ -0.41
TRIM4-201ENST00000349062 GLO1Q04760 184 aa12.46□□□□□ -0.41
TRIM4-201ENST00000349062 TAF13Q15543 124 aa12.46□□□□□ -0.41
TRIM4-201ENST00000349062 SLC18B1Q6NT16 456 aa12.46□□□□□ -0.41
TRIM4-201ENST00000349062 SLC51BQ86UW2 128 aa12.46□□□□□ -0.41
TRIM4-201ENST00000349062 PRSS35Q8N3Z0 413 aa12.46□□□□□ -0.41
TRIM4-201ENST00000349062 BMPERQ8N8U9 685 aa12.46□□□□□ -0.41
TRIM4-201ENST00000349062 ELMOD3Q96FG2 381 aa12.46□□□□□ -0.41
TRIM4-201ENST00000349062 CMKLR1Q99788 373 aa12.46□□□□□ -0.41
TRIM4-201ENST00000349062 P2RY10O00398 339 aa12.46□□□□□ -0.42
TRIM4-201ENST00000349062 EFNA2O43921 213 aa12.46□□□□□ -0.42
TRIM4-201ENST00000349062 UPK3AO75631 287 aa12.46□□□□□ -0.42
TRIM4-201ENST00000349062 TCN2P20062 427 aa12.46□□□□□ -0.42
TRIM4-201ENST00000349062 GALNSP34059 522 aa12.46□□□□□ -0.42
TRIM4-201ENST00000349062 BLVRAP53004 296 aa12.46□□□□□ -0.42
TRIM4-201ENST00000349062 HSF1Q00613 529 aa12.46□□□□□ -0.42
TRIM4-201ENST00000349062 Q499Y3 187 aa12.46□□□□□ -0.42
TRIM4-201ENST00000349062 SLC35D3Q5M8T2 416 aa12.46□□□□□ -0.42
TRIM4-201ENST00000349062 GPR139Q6DWJ6 353 aa12.46□□□□□ -0.42
TRIM4-201ENST00000349062 OR52I2Q8NH67 350 aa12.46□□□□□ -0.42
TRIM4-201ENST00000349062 ACOT12Q8WYK0 555 aa12.46□□□□□ -0.42
TRIM4-201ENST00000349062 ST8SIA2Q92186 375 aa12.46□□□□□ -0.42
TRIM4-201ENST00000349062 TRAF4Q9BUZ4 470 aaPredicted RBP12.46□□□□□ -0.42
TRIM4-201ENST00000349062 TXNIPQ9H3M7 391 aa12.46□□□□□ -0.42
TRIM4-201ENST00000349062 TMEM200CA6NKL6 621 aa12.45□□□□□ -0.42
TRIM4-201ENST00000349062 IFITM5A6NNB3 132 aa12.45□□□□□ -0.42
TRIM4-201ENST00000349062 TPOP07202 933 aa12.45□□□□□ -0.42
TRIM4-201ENST00000349062 ADRA2CP18825 462 aa12.45□□□□□ -0.42
TRIM4-201ENST00000349062 NPR2P20594 1047 aa12.45□□□□□ -0.42
TRIM4-201ENST00000349062 MFAP5Q13361 173 aa12.45□□□□□ -0.42
TRIM4-201ENST00000349062 SGCAQ16586 387 aa12.45□□□□□ -0.42
TRIM4-201ENST00000349062 ZNF627Q7L945 461 aa12.45□□□□□ -0.42
TRIM4-201ENST00000349062 LIX1LQ8IVB5 337 aa12.45□□□□□ -0.42
TRIM4-201ENST00000349062 NFAM1Q8NET5 270 aaPredicted RBP12.45□□□□□ -0.42
TRIM4-201ENST00000349062 NPRL2Q8WTW4 380 aa12.45□□□□□ -0.42
TRIM4-201ENST00000349062 TTC9Q92623 222 aa12.45□□□□□ -0.42
TRIM4-201ENST00000349062 RBPMSQ93062 196 aaKnown RBP12.45□□□□□ -0.42
TRIM4-201ENST00000349062 ZC3HAV1LQ96H79 300 aaKnown RBP12.45□□□□□ -0.42
TRIM4-201ENST00000349062 ZNF814B7Z6K7 855 aa12.45□□□□□ -0.42
TRIM4-201ENST00000349062 GPR171O14626 319 aa12.45□□□□□ -0.42
TRIM4-201ENST00000349062 OR2T1O43869 369 aa12.45□□□□□ -0.42
TRIM4-201ENST00000349062 APEHP13798 732 aaKnown RBP12.45□□□□□ -0.42
TRIM4-201ENST00000349062 DNASE1L1P49184 302 aa12.45□□□□□ -0.42
TRIM4-201ENST00000349062 SELENOPP49908 381 aa12.45□□□□□ -0.42
TRIM4-201ENST00000349062 AKR1D1P51857 326 aa12.45□□□□□ -0.42
TRIM4-201ENST00000349062 CLRN1P58418 232 aa12.45□□□□□ -0.42
TRIM4-201ENST00000349062 TRAM1Q15629 374 aa12.45□□□□□ -0.42
TRIM4-201ENST00000349062 H1FNTQ75WM6 255 aaPredicted RBP12.45□□□□□ -0.42
TRIM4-201ENST00000349062 PXKQ7Z7A4 578 aa12.45□□□□□ -0.42
TRIM4-201ENST00000349062 TMEM105Q8N8V8 129 aa12.45□□□□□ -0.42
TRIM4-201ENST00000349062 BOLLQ8N9W6 283 aaKnown RBP12.45□□□□□ -0.42
TRIM4-201ENST00000349062 OTOSQ8NHW6 89 aa12.45□□□□□ -0.42
TRIM4-201ENST00000349062 LINC00052Q96N35 136 aa12.45□□□□□ -0.42
TRIM4-201ENST00000349062 GFI1Q99684 422 aa12.45□□□□□ -0.42
TRIM4-201ENST00000349062 KCNJ15Q99712 375 aa12.45□□□□□ -0.42
TRIM4-201ENST00000349062 B3GNT4Q9C0J1 378 aa12.45□□□□□ -0.42
TRIM4-201ENST00000349062 C19orf25Q9UFG5 118 aaPredicted RBP12.45□□□□□ -0.42
TRIM4-201ENST00000349062 PCNX2A6NKB5 2137 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms