RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 SFTPDP35247 375 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 IL10RAQ13651 578 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 THSD4Q6ZMP0 1018 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 CCDC71LQ8N9Z2 235 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 CCL4L1Q8NHW4 92 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 TMEM59Q9BXS4 323 aa13.41□□□□□ -0.26
NUP50-201ENST00000347635 VSX1Q9NZR4 365 aaPredicted RBP13.41□□□□□ -0.26
NUP50-201ENST00000347635 CCNOP22674 350 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 GABRR1P24046 479 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 ZNF85Q03923 595 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 PEA15Q15121 130 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 DMKNQ6E0U4 476 aaPredicted RBP13.4□□□□□ -0.26
NUP50-201ENST00000347635 TMEM91Q6ZNR0 172 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 DCXRQ7Z4W1 244 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 SPICQ8N5J4 248 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 ESX1Q8N693 406 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 TCTEX1D2Q8WW35 142 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 SPTSSAQ969W0 71 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 ZPBPQ9BS86 351 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 NEUROG3Q9Y4Z2 214 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 ARPC4-TTLL3A0A0A6YYG9 625 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 FITM1A5D6W6 292 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 NUDT21O43809 227 aaKnown RBP13.4□□□□□ -0.26
NUP50-201ENST00000347635 CD46P15529 392 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 SERPINA2P20848 420 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 ACHEP22303 614 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 EEF1A1P68104 462 aaKnown RBP13.4□□□□□ -0.26
NUP50-201ENST00000347635 PLA2G7Q13093 441 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 SHISA6Q6ZSJ9 500 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 FJX1Q86VR8 437 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 RELL2Q8NC24 303 aaPredicted RBP13.4□□□□□ -0.26
NUP50-201ENST00000347635 SENP5Q96HI0 755 aaPredicted RBP13.4□□□□□ -0.26
NUP50-201ENST00000347635 NUDT22Q9BRQ3 303 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 OR5H14A6NHG9 310 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 A8MVM7 634 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 BHLHE40O14503 412 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 GSTZ1O43708 216 aaPredicted RBP13.4□□□□□ -0.26
NUP50-201ENST00000347635 KCNG3Q8TAE7 436 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 TMEM9BQ9NQ34 198 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 CIB4A0PJX0 185 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 ZNF749O43361 778 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 IFNA5P01569 189 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 IFNA17P01571 189 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 MGMTP16455 207 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 C1orf140Q5VVS0 124 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 FIP1L1Q6UN15 594 aaKnown RBP13.4□□□□□ -0.26
NUP50-201ENST00000347635 CARFQ8N187 725 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 OR5M1Q8NGP8 315 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 OR2G2Q8NGZ5 317 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 SCGB1C1Q8TD33 95 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 RSC1A1Q92681 617 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 S100PBPQ96BU1 408 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 FBXL4Q9UKA2 621 aa13.4□□□□□ -0.26
NUP50-201ENST00000347635 COA3Q9Y2R0 106 aaPredicted RBP13.4□□□□□ -0.26
NUP50-201ENST00000347635 MOSPD3O75425 235 aa13.39□□□□□ -0.27
NUP50-201ENST00000347635 FBXO24O75426 580 aa13.39□□□□□ -0.27
NUP50-201ENST00000347635 CXCL3P19876 107 aa13.39□□□□□ -0.27
NUP50-201ENST00000347635 RAB6AP20340 208 aa13.39□□□□□ -0.27
NUP50-201ENST00000347635 SSBP1Q04837 148 aaKnown RBP13.39□□□□□ -0.27
NUP50-201ENST00000347635 SMAD2Q15796 467 aaKnown RBP13.39□□□□□ -0.27
NUP50-201ENST00000347635 ACOT7LQ6ZUV0 252 aa13.39□□□□□ -0.27
NUP50-201ENST00000347635 RAB11FIP2Q7L804 512 aa13.39□□□□□ -0.27
NUP50-201ENST00000347635 CTDSPLO15194 276 aa13.39□□□□□ -0.27
NUP50-201ENST00000347635 HOXB9P17482 250 aaPredicted RBP13.39□□□□□ -0.27
NUP50-201ENST00000347635 SNTB1Q13884 538 aaKnown RBP13.39□□□□□ -0.27
NUP50-201ENST00000347635 ELAVL1Q15717 326 aaKnown RBP13.39□□□□□ -0.27
NUP50-201ENST00000347635 PRSS53Q2L4Q9 553 aa13.39□□□□□ -0.27
NUP50-201ENST00000347635 PLA1AQ53H76 456 aa13.39□□□□□ -0.27
NUP50-201ENST00000347635 LYPD8Q6UX82 237 aa13.39□□□□□ -0.27
NUP50-201ENST00000347635 MAMSTRQ6ZN01 415 aa13.39□□□□□ -0.27
NUP50-201ENST00000347635 FAM57BQ71RH2 274 aa13.39□□□□□ -0.27
NUP50-201ENST00000347635 MDGA2Q7Z553 956 aa13.39□□□□□ -0.27
NUP50-201ENST00000347635 TTC9Q92623 222 aa13.39□□□□□ -0.27
NUP50-201ENST00000347635 GDF15Q99988 308 aa13.39□□□□□ -0.27
NUP50-201ENST00000347635 PTDSS2Q9BVG9 487 aa13.39□□□□□ -0.27
NUP50-201ENST00000347635 K7EPK0 472 aa13.39□□□□□ -0.27
NUP50-201ENST00000347635 CD1CP29017 333 aa13.39□□□□□ -0.27
NUP50-201ENST00000347635 ZNF93P35789 620 aaPredicted RBP13.39□□□□□ -0.27
NUP50-201ENST00000347635 RPS27P42677 84 aaKnown RBP13.39□□□□□ -0.27
NUP50-201ENST00000347635 C17orf107Q6ZR85 190 aa13.39□□□□□ -0.27
NUP50-201ENST00000347635 FAM71E2Q8N5Q1 922 aa13.39□□□□□ -0.27
NUP50-201ENST00000347635 JAM3Q9BX67 310 aa13.39□□□□□ -0.27
NUP50-201ENST00000347635 FKRPQ9H9S5 495 aa13.39□□□□□ -0.27
NUP50-201ENST00000347635 KCNJ16Q9NPI9 418 aa13.39□□□□□ -0.27
NUP50-201ENST00000347635 LOC107986453A0A1B0GWG9 222 aa13.39□□□□□ -0.27
NUP50-201ENST00000347635 ALOX12BO75342 701 aa13.39□□□□□ -0.27
NUP50-201ENST00000347635 SELENOPP49908 381 aa13.39□□□□□ -0.27
NUP50-201ENST00000347635 AVPI1Q5T686 147 aa13.39□□□□□ -0.27
NUP50-201ENST00000347635 C16orf52Q8NHV5 167 aa13.39□□□□□ -0.27
NUP50-201ENST00000347635 NANOS1Q8WY41 292 aaKnown RBP13.39□□□□□ -0.27
NUP50-201ENST00000347635 RBM24Q9BX46 236 aaKnown RBP13.39□□□□□ -0.27
NUP50-201ENST00000347635 BRCA1P38398 1863 aaKnown RBP13.39□□□□□ -0.27
NUP50-201ENST00000347635 PRAMEF25A6NGN4 478 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 LANCL1O43813 399 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 SSX5O60225 188 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 GLSO94925 669 aaPredicted RBP13.38□□□□□ -0.27
NUP50-201ENST00000347635 SNRNP70P08621 437 aaKnown RBP13.38□□□□□ -0.27
NUP50-201ENST00000347635 PTHLHP12272 177 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 SSR4P51571 173 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 FAM53BQ14153 422 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms