RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 MRM2Q9UI43 246 aaKnown RBP14.34□□□□□ -0.11
HMGA1-202ENST00000347617 SLC22A7Q9Y694 548 aa14.34□□□□□ -0.11
HMGA1-202ENST00000347617 LILRA5A6NI73 299 aa14.33□□□□□ -0.12
HMGA1-202ENST00000347617 EFCAB7A8K855 629 aa14.33□□□□□ -0.12
HMGA1-202ENST00000347617 LMO7DNF2Z398 122 aa14.33□□□□□ -0.12
HMGA1-202ENST00000347617 CTSVO60911 334 aa14.33□□□□□ -0.12
HMGA1-202ENST00000347617 NGFRP08138 427 aa14.33□□□□□ -0.12
HMGA1-202ENST00000347617 NAT2P11245 290 aa14.33□□□□□ -0.12
HMGA1-202ENST00000347617 ABOP16442 354 aa14.33□□□□□ -0.12
HMGA1-202ENST00000347617 PRKXP51817 358 aa14.33□□□□□ -0.12
HMGA1-202ENST00000347617 RPS4XP62701 263 aaKnown RBP14.33□□□□□ -0.12
HMGA1-202ENST00000347617 DHRS2Q13268 280 aa14.33□□□□□ -0.12
HMGA1-202ENST00000347617 C1orf61Q13536 156 aa14.33□□□□□ -0.12
HMGA1-202ENST00000347617 TAF13Q15543 124 aa14.33□□□□□ -0.12
HMGA1-202ENST00000347617 TCEA2Q15560 299 aa14.33□□□□□ -0.12
HMGA1-202ENST00000347617 ATPAF1Q5TC12 328 aaPredicted RBP14.33□□□□□ -0.12
HMGA1-202ENST00000347617 ARMC6Q6NXE6 501 aa14.33□□□□□ -0.12
HMGA1-202ENST00000347617 H3F3CQ6NXT2 135 aa14.33□□□□□ -0.12
HMGA1-202ENST00000347617 LYG2Q86SG7 212 aa14.33□□□□□ -0.12
HMGA1-202ENST00000347617 OR10G6Q8NH81 332 aa14.33□□□□□ -0.12
HMGA1-202ENST00000347617 SLC39A7Q92504 469 aa14.33□□□□□ -0.12
HMGA1-202ENST00000347617 FAM3DQ96BQ1 224 aa14.33□□□□□ -0.12
HMGA1-202ENST00000347617 PRRT1Q99946 306 aa14.33□□□□□ -0.12
HMGA1-202ENST00000347617 ZNF768Q9H5H4 540 aaKnown RBP14.33□□□□□ -0.12
HMGA1-202ENST00000347617 DAPP1Q9UN19 280 aa14.33□□□□□ -0.12
HMGA1-202ENST00000347617 NOP16Q9Y3C1 178 aaKnown RBP14.33□□□□□ -0.12
HMGA1-202ENST00000347617 SNRNP200O75643 2136 aaKnown RBP14.33□□□□□ -0.12
HMGA1-202ENST00000347617 CYB5AP00167 134 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 IL2RAP01589 272 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 MAS1P04201 325 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 OR8G3PP0DMU2 310 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 SOX2P48431 317 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 CYCSP99999 105 aaKnown RBP14.32□□□□□ -0.12
HMGA1-202ENST00000347617 TRMT12Q53H54 448 aaKnown RBP14.32□□□□□ -0.12
HMGA1-202ENST00000347617 EMC4Q5J8M3 183 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 PHF19Q5T6S3 580 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 PRAMEF17Q5VTA0 474 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 AWAT2Q6E213 333 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 SLC25A42Q86VD7 318 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 OR2G2Q8NGZ5 317 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 RERGQ96A58 199 aaPredicted RBP14.32□□□□□ -0.12
HMGA1-202ENST00000347617 Q96M85 177 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 ZNF75AQ96N20 296 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 A0A087WUJ7 227 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 NPIPA5A0A0B4J1W7 369 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 TEX13DA0A0J9YY54 714 aaPredicted RBP14.32□□□□□ -0.12
HMGA1-202ENST00000347617 SYNDIG1LA6NDD5 238 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 IDSB3KWA1 339 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 NPIPA7E9PJI5 369 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 BLOC1S5-TXNDC5H3BN57 136 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 YKT6O15498 198 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 NUDT21O43809 227 aaKnown RBP14.32□□□□□ -0.12
HMGA1-202ENST00000347617 AMY2AP04746 511 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 NPIPA8P0DM63 369 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 TACR3P29371 465 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 GABRA3P34903 492 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 POLR2GP62487 172 aaKnown RBP eCLIP14.32□□□□□ -0.12
HMGA1-202ENST00000347617 GUCA2AQ02747 115 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 PLAURQ03405 335 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 FAM166AQ6J272 317 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 LEG1Q6P5S2 330 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 ZNF440Q8IYI8 595 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 EXD3Q8N9H8 876 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 OR51D1Q8NGF3 324 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 PPP1R1CQ8WVI7 109 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 TMEM106AQ96A25 262 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 PTX4Q96A99 478 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 SEH1LQ96EE3 360 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 SAT2Q96F10 170 aaPredicted RBP14.32□□□□□ -0.12
HMGA1-202ENST00000347617 PIK3IP1Q96FE7 263 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 ZNF587Q96SQ5 575 aaPredicted RBP14.32□□□□□ -0.12
HMGA1-202ENST00000347617 PHB2Q99623 299 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 CHRNA10Q9GZZ6 450 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 RAB33BQ9H082 229 aa14.32□□□□□ -0.12
HMGA1-202ENST00000347617 TRAV8-7A0A075B6U6 113 aa14.31□□□□□ -0.12
HMGA1-202ENST00000347617 DOK2O60496 412 aa14.31□□□□□ -0.12
HMGA1-202ENST00000347617 RPP14O95059 124 aaKnown RBP14.31□□□□□ -0.12
HMGA1-202ENST00000347617 TXNDC12O95881 172 aa14.31□□□□□ -0.12
HMGA1-202ENST00000347617 CD37P11049 281 aa14.31□□□□□ -0.12
HMGA1-202ENST00000347617 ADCYAP1P18509 176 aa14.31□□□□□ -0.12
HMGA1-202ENST00000347617 ZBTB25P24278 435 aa14.31□□□□□ -0.12
HMGA1-202ENST00000347617 LSSP48449 732 aa14.31□□□□□ -0.12
HMGA1-202ENST00000347617 AFF3P51826 1226 aaKnown RBP14.31□□□□□ -0.12
HMGA1-202ENST00000347617 EIF5AP63241 154 aaKnown RBP14.31□□□□□ -0.12
HMGA1-202ENST00000347617 PJVKQ0ZLH3 352 aa14.31□□□□□ -0.12
HMGA1-202ENST00000347617 C2orf76Q3KRA6 126 aa14.31□□□□□ -0.12
HMGA1-202ENST00000347617 TMEM88Q6PEY1 159 aa14.31□□□□□ -0.12
HMGA1-202ENST00000347617 FIGNL1Q6PIW4 674 aa14.31□□□□□ -0.12
HMGA1-202ENST00000347617 TMED4Q7Z7H5 227 aa14.31□□□□□ -0.12
HMGA1-202ENST00000347617 GALNT16Q8N428 558 aa14.31□□□□□ -0.12
HMGA1-202ENST00000347617 OR5AP2Q8NGF4 316 aa14.31□□□□□ -0.12
HMGA1-202ENST00000347617 OR1J2Q8NGS2 313 aa14.31□□□□□ -0.12
HMGA1-202ENST00000347617 LMX1AQ8TE12 382 aa14.31□□□□□ -0.12
HMGA1-202ENST00000347617 MITD1Q8WV92 249 aa14.31□□□□□ -0.12
HMGA1-202ENST00000347617 ZNRF4Q8WWF5 429 aa14.31□□□□□ -0.12
HMGA1-202ENST00000347617 LIPHQ8WWY8 451 aa14.31□□□□□ -0.12
HMGA1-202ENST00000347617 TCEAL3Q969E4 200 aa14.31□□□□□ -0.12
HMGA1-202ENST00000347617 ARL5BQ96KC2 179 aa14.31□□□□□ -0.12
HMGA1-202ENST00000347617 DCBLD2Q96PD2 775 aa14.31□□□□□ -0.12
HMGA1-202ENST00000347617 ATG5Q9H1Y0 275 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms